RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 LINC00482Q8N8I6 264 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 PROKR2Q8NFJ6 384 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 OR4K5Q8NGD3 323 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 OR4K14Q8NGD5 310 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 XAGE5Q8WWM1 108 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 PIGTQ969N2 578 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 ITFG2Q969R8 447 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 OMA1Q96E52 524 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 TRMT61AQ96FX7 289 aaKnown RBP4.29□□□□□ -1.72
LINC00550-201ENST00000629293 SPATA5L1Q9BVQ7 753 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 PRRG4Q9BZD6 226 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 C6orf62Q9GZU0 229 aaPredicted RBP4.29□□□□□ -1.72
LINC00550-201ENST00000629293 SLC38A1Q9H2H9 487 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 C3orf14Q9HBI5 128 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 FBXO34Q9NWN3 711 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 FAM30AQ9NZY2 134 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 SEC14L4Q9UDX3 406 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 FBXL2Q9UKC9 423 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 TRAPPC4Q9Y296 219 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 SLC9A8Q9Y2E8 581 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 KCNE3Q9Y6H6 103 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 WNK2Q9Y3S1 2297 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 SYNDIG1LA6NDD5 238 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 CD8B2A6NJW9 211 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 ZNF670-ZNF695F2Z2N8 137 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 GUCY1B2O75343 617 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 KCNK2O95069 426 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 TK1P04183 234 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 HMGN2P05204 90 aaKnown RBP4.29□□□□□ -1.72
LINC00550-201ENST00000629293 SLC35E2P0CK97 266 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 HSMCR30P0CW71 290 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 LASP1Q14847 261 aaKnown RBP4.29□□□□□ -1.72
LINC00550-201ENST00000629293 SGCBQ16585 318 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 HEPHL1Q6MZM0 1159 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 ACSM5Q6NUN0 579 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 BHLHB9Q6PI77 547 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 CASP12Q6UXS9 341 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 BCDIN3DQ7Z5W3 292 aaKnown RBP4.29□□□□□ -1.72
LINC00550-201ENST00000629293 TCEANCQ8N8B7 351 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 OR4K17Q8NGC6 315 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 OR52I1Q8NGK6 324 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 EFHD2Q96C19 240 aaPredicted RBP4.29□□□□□ -1.72
LINC00550-201ENST00000629293 ARSGQ96EG1 525 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 TXNDC15Q96J42 360 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 ZNF582Q96NG8 517 aaPredicted RBP4.29□□□□□ -1.72
LINC00550-201ENST00000629293 WDFY2Q96P53 400 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 OR7D2Q96RA2 312 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 BBS4Q96RK4 519 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 FNDC11Q9BVV2 318 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 BARHL1Q9BZE3 327 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 PLA2G12AQ9BZM1 189 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 UBQLN3Q9H347 655 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 ANKRD19PQ9H560 264 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 FOLH1BQ9HBA9 442 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 SH2D2AQ9NP31 389 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 FGF20Q9NP95 211 aaPredicted RBP4.29□□□□□ -1.72
LINC00550-201ENST00000629293 ABCB10Q9NRK6 738 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 BEX4Q9NWD9 120 aaPredicted RBP4.29□□□□□ -1.72
LINC00550-201ENST00000629293 STUB1Q9UNE7 303 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 OR10H1Q9Y4A9 318 aa4.29□□□□□ -1.72
LINC00550-201ENST00000629293 MBD3L5A6NJ08 208 aaPredicted RBP4.28□□□□□ -1.72
LINC00550-201ENST00000629293 SLC22A20A6NK97 555 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 H3BN98 237 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 EMC8O43402 210 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 RAB36O95755 333 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 PLGP00747 810 aaPredicted RBP4.28□□□□□ -1.72
LINC00550-201ENST00000629293 SPNP16150 400 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 GSTM3P21266 225 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 SOX6P35712 828 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 UCP3P55916 312 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 SORDQ00796 357 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 FBXL19-AS1Q494R0 122 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 TRMT12Q53H54 448 aaKnown RBP4.28□□□□□ -1.72
LINC00550-201ENST00000629293 TMEM107Q6UX40 140 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 KRTAP1-3Q8IUG1 177 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 PHC2Q8IXK0 858 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 ZNF619Q8N2I2 560 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 ZNF485Q8NCK3 441 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 OR8D4Q8NGM9 314 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 MBD3L2Q8NHZ7 208 aaPredicted RBP4.28□□□□□ -1.72
LINC00550-201ENST00000629293 FNDC9Q8TBE3 224 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 SLC9A6Q92581 669 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 KAT2AQ92830 837 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 ELP4Q96EB1 424 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 OTUB1Q96FW1 271 aaPredicted RBP4.28□□□□□ -1.72
LINC00550-201ENST00000629293 C16orf58Q96GQ5 468 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 PELOQ9BRX2 385 aaKnown RBP4.28□□□□□ -1.72
LINC00550-201ENST00000629293 CCDC32Q9BV29 185 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 SFXN3Q9BWM7 321 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 ANGPTL4Q9BY76 406 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 LYARQ9NX58 379 aaKnown RBP4.28□□□□□ -1.72
LINC00550-201ENST00000629293 CDC42EP3Q9UKI2 254 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 LAMP3Q9UQV4 416 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 V9GYH0 126 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 A0A087WUU8 490 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 IQCMA0A1B0GVH7 501 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 A0A1W2PPH5 198 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 TMEM129A0AVI4 362 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 A8MXE2 369 aa4.28□□□□□ -1.72
LINC00550-201ENST00000629293 LOC110117498-PIK3R3F6TDL0 507 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms