RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 OR51B6Q9H340 312 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 MUC13Q9H3R2 512 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 CDH20Q9HBT6 801 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 TMCC3Q9ULS5 477 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 FZR1Q9UM11 496 aa12.24□□□□□ -0.45
PNKP-223ENST00000629179 PRPF19Q9UMS4 504 aaKnown RBP12.24□□□□□ -0.45
PNKP-223ENST00000629179 SOCS2O14508 198 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 UBOX5O94941 541 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 PTHP01270 115 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 IGFBP1P08833 259 aaPredicted RBP12.23□□□□□ -0.45
PNKP-223ENST00000629179 CST2P09228 141 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 FAM157BP0CG42 384 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 CTLA4P16410 223 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 SDHAP31040 664 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 GUCA1AP43080 201 aaPredicted RBP12.23□□□□□ -0.45
PNKP-223ENST00000629179 PPOXP50336 477 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 DSCR9P59020 149 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 PSG4Q00888 419 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 TBC1D28Q2M2D7 210 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 GPR139Q6DWJ6 353 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 SMARCD3Q6STE5 483 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 DPY19L2P2Q6ZN68 376 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 PTCHD4Q6ZW05 846 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 LRP11Q86VZ4 500 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 FANK1Q8TC84 345 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 FAM168AQ92567 244 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 CCDC124Q96CT7 223 aaKnown RBP12.23□□□□□ -0.45
PNKP-223ENST00000629179 SYT3Q9BQG1 590 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 THTPAQ9BU02 230 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 C1orf198Q9H425 327 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 EMC7Q9NPA0 242 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 SLC7A8Q9UHI5 535 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 LYVE1Q9Y5Y7 322 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 JMJD1CQ15652 2540 aa12.23□□□□□ -0.45
PNKP-223ENST00000629179 TNFRSF11BO00300 401 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 AHCYL1O43865 530 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 SLC16A7O60669 478 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 KRT36O76013 467 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 PPP1R3DO95685 299 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 ADRA2AP08913 450 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 MSR1P21757 451 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 CCNOP22674 350 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 FPR3P25089 353 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 STOMP27105 288 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 APLNRP35414 380 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 CDKN2AP42771 156 aaKnown RBP12.22□□□□□ -0.45
PNKP-223ENST00000629179 MAGEA2P43356 314 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 GSSP48637 474 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 RPS6KA3P51812 740 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 HMGA2P52926 109 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 RPS23P62266 143 aaKnown RBP12.22□□□□□ -0.45
PNKP-223ENST00000629179 PPP1R8Q12972 351 aaKnown RBP12.22□□□□□ -0.45
PNKP-223ENST00000629179 ENDOGQ14249 297 aaKnown RBP12.22□□□□□ -0.45
PNKP-223ENST00000629179 RFX4Q33E94 735 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 C1orf94Q6P1W5 598 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 PGBD2Q6P3X8 592 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 UGT2A3Q6UWM9 527 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 OR1J2Q8NGS2 313 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 GNPDA2Q8TDQ7 276 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 C10orf105Q8TEF2 133 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 SAMD8Q96LT4 415 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 ERMAPQ96PL5 475 aaPredicted RBP12.22□□□□□ -0.45
PNKP-223ENST00000629179 ZNF416Q9BWM5 594 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 OR2H1Q9GZK4 316 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 RAB1BQ9H0U4 201 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 WNT5BQ9H1J7 359 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 SYT4Q9H2B2 425 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 LRMDAQ9H2I8 198 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 OR52D1Q9H346 318 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 RERGLQ9H628 205 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 MAGIXQ9H6Y5 334 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 DYNLRB1Q9NP97 96 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 POLE4Q9NR33 117 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 MYEF2Q9P2K5 600 aaKnown RBP12.22□□□□□ -0.45
PNKP-223ENST00000629179 FKBP7Q9Y680 259 aa12.22□□□□□ -0.45
PNKP-223ENST00000629179 LOC100509620A0A075B734 347 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 A0A096LNT2 108 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 ACOT8O14734 319 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 SNAP29O95721 258 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 TXNDC12O95881 172 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 HOXB4P17483 251 aaPredicted RBP12.21□□□□□ -0.45
PNKP-223ENST00000629179 IFNGR2P38484 337 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 EVX1P49640 407 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 UCP2P55851 309 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 ERVS71-1P61550 626 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 KRTAP1-1Q07627 177 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 TSPAN31Q12999 210 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 CARTPTQ16568 116 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 OTPQ5XKR4 325 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 RGS7BPQ6MZT1 257 aaPredicted RBP12.21□□□□□ -0.45
PNKP-223ENST00000629179 ZNF774Q6NX45 483 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 OR9Q2Q8NGE9 314 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 OR4C15Q8NGM1 316 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 ASB9Q96DX5 294 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 POM121L2Q96KW2 1035 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 LRGUKQ96M69 825 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 BTBD10Q9BSF8 475 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 IFT27Q9BW83 186 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 NUAK2Q9H093 628 aa12.21□□□□□ -0.45
PNKP-223ENST00000629179 VNN3Q9NY84 501 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms