RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 IGFBP1P08833 259 aaPredicted RBP11.71□□□□□ -0.53
SCN8A-209ENST00000627620 HIST1H1CP16403 213 aaKnown RBP11.71□□□□□ -0.53
SCN8A-209ENST00000627620 HOXD12P35452 270 aa11.71□□□□□ -0.53
SCN8A-209ENST00000627620 CCR9P51686 369 aa11.71□□□□□ -0.53
SCN8A-209ENST00000627620 ISL1P61371 349 aa11.71□□□□□ -0.53
SCN8A-209ENST00000627620 SOWAHCQ53LP3 525 aaPredicted RBP11.71□□□□□ -0.53
SCN8A-209ENST00000627620 OR10K1Q8NGX5 313 aa11.71□□□□□ -0.53
SCN8A-209ENST00000627620 TSLPQ969D9 159 aa11.71□□□□□ -0.53
SCN8A-209ENST00000627620 INTS12Q96CB8 462 aaKnown RBP11.71□□□□□ -0.53
SCN8A-209ENST00000627620 TAS2R4Q9NYW5 299 aa11.71□□□□□ -0.53
SCN8A-209ENST00000627620 HS3ST1O14792 307 aa11.71□□□□□ -0.53
SCN8A-209ENST00000627620 PPICP45877 212 aa11.71□□□□□ -0.53
SCN8A-209ENST00000627620 IL10RAQ13651 578 aa11.71□□□□□ -0.53
SCN8A-209ENST00000627620 OVCH1Q7RTY7 1134 aa11.71□□□□□ -0.53
SCN8A-209ENST00000627620 SUMF1Q8NBK3 374 aa11.71□□□□□ -0.53
SCN8A-209ENST00000627620 ZNF784Q8NCA9 323 aaPredicted RBP11.71□□□□□ -0.53
SCN8A-209ENST00000627620 MYEOVQ96EZ4 313 aa11.71□□□□□ -0.53
SCN8A-209ENST00000627620 SLC25A21Q9BQT8 299 aaPredicted RBP11.71□□□□□ -0.53
SCN8A-209ENST00000627620 C1QTNF6Q9BXI9 259 aa11.71□□□□□ -0.53
SCN8A-209ENST00000627620 BCO1Q9HAY6 547 aa11.71□□□□□ -0.53
SCN8A-209ENST00000627620 HEYLQ9NQ87 328 aaPredicted RBP11.71□□□□□ -0.53
SCN8A-209ENST00000627620 UGT2A1Q9Y4X1 527 aa11.71□□□□□ -0.53
SCN8A-209ENST00000627620 MICAL3Q7RTP6 2002 aa11.71□□□□□ -0.54
SCN8A-209ENST00000627620 PIPP12273 146 aaPredicted RBP11.71□□□□□ -0.54
SCN8A-209ENST00000627620 HES1Q14469 280 aa11.71□□□□□ -0.54
SCN8A-209ENST00000627620 ACKR1Q16570 336 aa11.71□□□□□ -0.54
SCN8A-209ENST00000627620 CAMKMTQ7Z624 323 aa11.71□□□□□ -0.54
SCN8A-209ENST00000627620 PRSS35Q8N3Z0 413 aa11.71□□□□□ -0.54
SCN8A-209ENST00000627620 RTL8AQ9BWD3 113 aa11.71□□□□□ -0.54
SCN8A-209ENST00000627620 LAT2Q9GZY6 243 aa11.71□□□□□ -0.54
SCN8A-209ENST00000627620 ZNF346Q9UL40 294 aaKnown RBP11.71□□□□□ -0.54
SCN8A-209ENST00000627620 LOC107986453A0A1B0GWG9 222 aa11.71□□□□□ -0.54
SCN8A-209ENST00000627620 A0A1W2PPH5 198 aa11.71□□□□□ -0.54
SCN8A-209ENST00000627620 FITM1A5D6W6 292 aa11.71□□□□□ -0.54
SCN8A-209ENST00000627620 C4orf47A7E2U8 309 aa11.71□□□□□ -0.54
SCN8A-209ENST00000627620 H0YIG0 161 aa11.71□□□□□ -0.54
SCN8A-209ENST00000627620 RAB27BO00194 218 aa11.71□□□□□ -0.54
SCN8A-209ENST00000627620 PLRG1O43660 514 aaKnown RBP11.71□□□□□ -0.54
SCN8A-209ENST00000627620 ZIC2O95409 532 aaPredicted RBP11.71□□□□□ -0.54
SCN8A-209ENST00000627620 AADACP22760 399 aa11.71□□□□□ -0.54
SCN8A-209ENST00000627620 CAPZBP47756 277 aa11.71□□□□□ -0.54
SCN8A-209ENST00000627620 SRP9P49458 86 aaKnown RBP11.71□□□□□ -0.54
SCN8A-209ENST00000627620 TMEM81Q6P7N7 255 aa11.71□□□□□ -0.54
SCN8A-209ENST00000627620 ZNF620Q6ZNG0 422 aa11.71□□□□□ -0.54
SCN8A-209ENST00000627620 OR51E1Q8TCB6 317 aa11.71□□□□□ -0.54
SCN8A-209ENST00000627620 PCNPQ8WW12 178 aaKnown RBP11.71□□□□□ -0.54
SCN8A-209ENST00000627620 C11orf40Q8WZ69 217 aa11.71□□□□□ -0.54
SCN8A-209ENST00000627620 SEC22CQ9BRL7 303 aa11.71□□□□□ -0.54
SCN8A-209ENST00000627620 SLC25A37Q9NYZ2 338 aa11.71□□□□□ -0.54
SCN8A-209ENST00000627620 A0A1W2PNR3 127 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 FCMRO60667 390 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 ICOSLGO75144 302 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 SLC2A10O95528 541 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 SDHAP31040 664 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 TGM4P49221 684 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 ACSM5Q6NUN0 579 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 LGI3Q8N145 548 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 MORN4Q8NDC4 146 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 SLAMF6Q96DU3 332 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 BOD1Q96IK1 185 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 CT45A6P0DMU7 189 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 CT45A5P0DMU8 189 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 CT45A7P0DMV0 189 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 CT45A8P0DMV1 189 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 CT45A9P0DMV2 189 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 SRFP11831 508 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 M6PRP20645 277 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 SMAD4Q13485 552 aaKnown RBP11.7□□□□□ -0.54
SCN8A-209ENST00000627620 SLC10A1Q14973 349 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 CT45A2Q5DJT8 189 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 CT45A1Q5HYN5 189 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 CT45A3Q8NHU0 189 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 NANPQ8TBE9 248 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 MENTQ9BUN1 341 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 POFUT1Q9H488 388 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 HINT3Q9NQE9 182 aaKnown RBP11.7□□□□□ -0.54
SCN8A-209ENST00000627620 CMC2Q9NRP2 79 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 C4AP0C0L4 1744 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 EIF4EP06730 217 aaKnown RBP11.7□□□□□ -0.54
SCN8A-209ENST00000627620 FOLR1P15328 257 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 PRKACAP17612 351 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 SPI1P17947 270 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 CNR1P21554 472 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 ZNF266Q14584 549 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 SMIM15Q7Z3B0 74 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 CPEB2Q7Z5Q1 589 aaKnown RBP11.7□□□□□ -0.54
SCN8A-209ENST00000627620 FAM109AQ8N4B1 249 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 SLC35G3Q8N808 338 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 OR51A2Q8NGJ7 313 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 OR51S1Q8NGJ8 323 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 MBOAT4Q96T53 435 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 KCNJ15Q99712 375 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 OR11A1Q9GZK7 315 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 ASH2LQ9UBL3 628 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 TIMM10BQ9Y5J6 103 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 DDX60Q8IY21 1712 aaKnown RBP11.7□□□□□ -0.54
SCN8A-209ENST00000627620 RBP2P50120 134 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 TMPRSS7Q7RTY8 843 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 OR2L13Q8N349 312 aa11.7□□□□□ -0.54
SCN8A-209ENST00000627620 HSD17B11Q8NBQ5 300 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms