RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 POM121L2Q96KW2 1035 aa16.09■□□□□ 0.17
SMN1-211ENST00000625245 SEPHS2Q99611 448 aa16.09■□□□□ 0.17
SMN1-211ENST00000625245 OR2J1Q9GZK6 312 aa16.09■□□□□ 0.17
SMN1-211ENST00000625245 STX18Q9P2W9 335 aaKnown RBP16.09■□□□□ 0.17
SMN1-211ENST00000625245 UGT2A1Q9Y4X1 527 aa16.09■□□□□ 0.17
SMN1-211ENST00000625245 LOC100509620A0A075B734 347 aa16.08■□□□□ 0.16
SMN1-211ENST00000625245 IGKV1D-43A0A0B4J1Z2 117 aa16.08■□□□□ 0.16
SMN1-211ENST00000625245 ZSCAN5BA6NJL1 495 aa16.08■□□□□ 0.16
SMN1-211ENST00000625245 SHOX2O60902 331 aaPredicted RBP16.08■□□□□ 0.16
SMN1-211ENST00000625245 GATA3P23771 443 aa16.08■□□□□ 0.16
SMN1-211ENST00000625245 MMP15P51511 669 aa16.08■□□□□ 0.16
SMN1-211ENST00000625245 ZNF133P52736 654 aaPredicted RBP16.08■□□□□ 0.16
SMN1-211ENST00000625245 PSG4Q00888 419 aa16.08■□□□□ 0.16
SMN1-211ENST00000625245 SLC3A1Q07837 685 aa16.08■□□□□ 0.16
SMN1-211ENST00000625245 TOP3AQ13472 1001 aaPredicted RBP16.08■□□□□ 0.16
SMN1-211ENST00000625245 LAPTM4AQ15012 233 aa16.08■□□□□ 0.16
SMN1-211ENST00000625245 VMACQ2NL98 169 aa16.08■□□□□ 0.16
SMN1-211ENST00000625245 AWAT1Q58HT5 328 aa16.08■□□□□ 0.16
SMN1-211ENST00000625245 TMEM255AQ5JRV8 349 aa16.08■□□□□ 0.16
SMN1-211ENST00000625245 BEND6Q5SZJ8 279 aaPredicted RBP16.08■□□□□ 0.16
SMN1-211ENST00000625245 ARMC4Q5T2S8 1044 aa16.08■□□□□ 0.16
SMN1-211ENST00000625245 ABHD4Q8TB40 342 aa16.08■□□□□ 0.16
SMN1-211ENST00000625245 KLF14Q8TD94 323 aaPredicted RBP16.08■□□□□ 0.16
SMN1-211ENST00000625245 HDAC2Q92769 488 aaKnown RBP16.08■□□□□ 0.16
SMN1-211ENST00000625245 NABP1Q96AH0 204 aa16.08■□□□□ 0.16
SMN1-211ENST00000625245 C20orf141Q9NUB4 165 aa16.08■□□□□ 0.16
SMN1-211ENST00000625245 DDX28Q9NUL7 540 aaKnown RBP16.08■□□□□ 0.16
SMN1-211ENST00000625245 OPN4Q9UHM6 478 aa16.08■□□□□ 0.16
SMN1-211ENST00000625245 RIMS3Q9UJD0 308 aa16.08■□□□□ 0.16
SMN1-211ENST00000625245 PPIAL4AQ9Y536 164 aa16.08■□□□□ 0.16
SMN1-211ENST00000625245 TANC2Q9HCD6 1990 aa16.07■□□□□ 0.16
SMN1-211ENST00000625245 UBOX5O94941 541 aa16.07■□□□□ 0.16
SMN1-211ENST00000625245 RBM34P42696 430 aaKnown RBP16.07■□□□□ 0.16
SMN1-211ENST00000625245 CRYBA2P53672 197 aa16.07■□□□□ 0.16
SMN1-211ENST00000625245 PPP1CBP62140 327 aa16.07■□□□□ 0.16
SMN1-211ENST00000625245 UBA52P62987 128 aaKnown RBP16.07■□□□□ 0.16
SMN1-211ENST00000625245 HNRNPA0Q13151 305 aaKnown RBP16.07■□□□□ 0.16
SMN1-211ENST00000625245 PIN1Q13526 163 aaPredicted RBP16.07■□□□□ 0.16
SMN1-211ENST00000625245 SPRNQ5BIV9 151 aa16.07■□□□□ 0.16
SMN1-211ENST00000625245 TMEM239Q8WW34 195 aa16.07■□□□□ 0.16
SMN1-211ENST00000625245 GEMIN6Q8WXD5 167 aaKnown RBP16.07■□□□□ 0.16
SMN1-211ENST00000625245 DCLRE1CQ96SD1 692 aaKnown RBP16.07■□□□□ 0.16
SMN1-211ENST00000625245 CYSLTR2Q9NS75 346 aa16.07■□□□□ 0.16
SMN1-211ENST00000625245 NGFP01138 241 aa16.06■□□□□ 0.16
SMN1-211ENST00000625245 SBK2P0C263 348 aa16.06■□□□□ 0.16
SMN1-211ENST00000625245 LAP3P28838 519 aa16.06■□□□□ 0.16
SMN1-211ENST00000625245 LIPAP38571 399 aa16.06■□□□□ 0.16
SMN1-211ENST00000625245 MBNL2Q5VZF2 373 aaKnown RBP16.06■□□□□ 0.16
SMN1-211ENST00000625245 SLC25A47Q6Q0C1 308 aa16.06■□□□□ 0.16
SMN1-211ENST00000625245 RBMS3Q6XE24 437 aaKnown RBP16.06■□□□□ 0.16
SMN1-211ENST00000625245 RFPL4BQ6ZWI9 263 aa16.06■□□□□ 0.16
SMN1-211ENST00000625245 CCDC80Q76M96 950 aa16.06■□□□□ 0.16
SMN1-211ENST00000625245 ALDH16A1Q8IZ83 802 aa16.06■□□□□ 0.16
SMN1-211ENST00000625245 NMD3Q96D46 503 aaKnown RBP16.06■□□□□ 0.16
SMN1-211ENST00000625245 RBP7Q96R05 134 aa16.06■□□□□ 0.16
SMN1-211ENST00000625245 OR2H1Q9GZK4 316 aa16.06■□□□□ 0.16
SMN1-211ENST00000625245 WNT5BQ9H1J7 359 aa16.06■□□□□ 0.16
SMN1-211ENST00000625245 TXNIPQ9H3M7 391 aa16.06■□□□□ 0.16
SMN1-211ENST00000625245 SMURF2Q9HAU4 748 aa16.06■□□□□ 0.16
SMN1-211ENST00000625245 NTN4Q9HB63 628 aa16.06■□□□□ 0.16
SMN1-211ENST00000625245 MSL2Q9HCI7 577 aa16.06■□□□□ 0.16
SMN1-211ENST00000625245 BAG5Q9UL15 447 aa16.06■□□□□ 0.16
SMN1-211ENST00000625245 MED31Q9Y3C7 131 aa16.06■□□□□ 0.16
SMN1-211ENST00000625245 PCDHGB1Q9Y5G3 927 aa16.06■□□□□ 0.16
SMN1-211ENST00000625245 MGAM2Q2M2H8 2515 aa16.05■□□□□ 0.16
SMN1-211ENST00000625245 FOXH1O75593 365 aa16.05■□□□□ 0.16
SMN1-211ENST00000625245 OR5F1O95221 314 aa16.05■□□□□ 0.16
SMN1-211ENST00000625245 NR2C1P13056 603 aa16.05■□□□□ 0.16
SMN1-211ENST00000625245 ZFP36P26651 326 aaKnown RBP16.05■□□□□ 0.16
SMN1-211ENST00000625245 GUCA1AP43080 201 aaPredicted RBP16.05■□□□□ 0.16
SMN1-211ENST00000625245 OR1E2P47887 323 aa16.05■□□□□ 0.16
SMN1-211ENST00000625245 GZMMP51124 257 aa16.05■□□□□ 0.16
SMN1-211ENST00000625245 TAF11Q15544 211 aa16.05■□□□□ 0.16
SMN1-211ENST00000625245 ALG10Q5BKT4 473 aa16.05■□□□□ 0.16
SMN1-211ENST00000625245 FAM27BQ5VT28 67 aa16.05■□□□□ 0.16
SMN1-211ENST00000625245 NANOGP8Q6NSW7 305 aa16.05■□□□□ 0.16
SMN1-211ENST00000625245 SIGLECL1Q8N7X8 197 aa16.05■□□□□ 0.16
SMN1-211ENST00000625245 ZDHHC8Q9ULC8 765 aa16.05■□□□□ 0.16
SMN1-211ENST00000625245 TIMM10BQ9Y5J6 103 aa16.05■□□□□ 0.16
SMN1-211ENST00000625245 NPTNQ9Y639 398 aa16.05■□□□□ 0.16
SMN1-211ENST00000625245 GMNCA6NCL1 334 aa16.04■□□□□ 0.16
SMN1-211ENST00000625245 TIMM8AO60220 97 aaPredicted RBP16.04■□□□□ 0.16
SMN1-211ENST00000625245 PIP5K1CO60331 668 aa16.04■□□□□ 0.16
SMN1-211ENST00000625245 FSHBP01225 129 aa16.04■□□□□ 0.16
SMN1-211ENST00000625245 RBMXP38159 391 aaKnown RBP16.04■□□□□ 0.16
SMN1-211ENST00000625245 ARHGDIAP52565 204 aa16.04■□□□□ 0.16
SMN1-211ENST00000625245 TNFAIP6P98066 277 aaPredicted RBP16.04■□□□□ 0.16
SMN1-211ENST00000625245 CYLC2Q14093 348 aaPredicted RBP16.04■□□□□ 0.16
SMN1-211ENST00000625245 ZMAT1Q5H9K5 638 aa16.04■□□□□ 0.16
SMN1-211ENST00000625245 ZNF774Q6NX45 483 aa16.04■□□□□ 0.16
SMN1-211ENST00000625245 C1orf174Q8IYL3 243 aa16.04■□□□□ 0.16
SMN1-211ENST00000625245 CLDN22Q8N7P3 220 aa16.04■□□□□ 0.16
SMN1-211ENST00000625245 TSPEARQ8WU66 669 aa16.04■□□□□ 0.16
SMN1-211ENST00000625245 ATP6V1G3Q96LB4 118 aa16.04■□□□□ 0.16
SMN1-211ENST00000625245 C4orf45Q96LM5 186 aa16.04■□□□□ 0.16
SMN1-211ENST00000625245 DIRC2Q96SL1 478 aa16.04■□□□□ 0.16
SMN1-211ENST00000625245 ECSITQ9BQ95 431 aa16.04■□□□□ 0.16
SMN1-211ENST00000625245 ALG12Q9BV10 488 aa16.04■□□□□ 0.16
SMN1-211ENST00000625245 ELOVL3Q9HB03 270 aa16.04■□□□□ 0.16
SMN1-211ENST00000625245 DCAF16Q9NXF7 216 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms