RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ARR3P36575 388 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 RAB1AP62820 205 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 CRMP1Q14194 572 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 TMEM236Q5W0B7 351 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 SLC27A4Q6P1M0 643 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 SLC16A14Q7RTX9 510 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 PQLC1Q8N2U9 271 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 CIB1Q99828 191 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 NMNAT2Q9BZQ4 307 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 RACGAP1Q9H0H5 632 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 CMC2Q9NRP2 79 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 KRT84Q9NSB2 600 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 B9D1Q9UPM9 204 aa12.44□□□□□ -0.42
CBWD3-217ENST00000621474 UBL3O95164 117 aa12.43□□□□□ -0.42
CBWD3-217ENST00000621474 FARS2O95363 451 aaKnown RBP12.43□□□□□ -0.42
CBWD3-217ENST00000621474 PAX7P23759 505 aa12.43□□□□□ -0.42
CBWD3-217ENST00000621474 PTDSS1P48651 473 aaKnown RBP12.43□□□□□ -0.42
CBWD3-217ENST00000621474 IDH3GP51553 393 aaPredicted RBP12.43□□□□□ -0.42
CBWD3-217ENST00000621474 CRISP1P54107 249 aa12.43□□□□□ -0.42
CBWD3-217ENST00000621474 NPRL3Q12980 569 aa12.43□□□□□ -0.42
CBWD3-217ENST00000621474 GINS1Q14691 196 aa12.43□□□□□ -0.42
CBWD3-217ENST00000621474 SGCAQ16586 387 aa12.43□□□□□ -0.42
CBWD3-217ENST00000621474 B3GLCTQ6Y288 498 aa12.43□□□□□ -0.42
CBWD3-217ENST00000621474 C10orf67Q8IYJ2 551 aa12.43□□□□□ -0.42
CBWD3-217ENST00000621474 PIAS4Q8N2W9 510 aaPredicted RBP12.43□□□□□ -0.42
CBWD3-217ENST00000621474 NANOS1Q8WY41 292 aaKnown RBP12.43□□□□□ -0.42
CBWD3-217ENST00000621474 ZNF416Q9BWM5 594 aa12.43□□□□□ -0.42
CBWD3-217ENST00000621474 HCAR1Q9BXC0 346 aa12.43□□□□□ -0.42
CBWD3-217ENST00000621474 RERGLQ9H628 205 aa12.43□□□□□ -0.42
CBWD3-217ENST00000621474 SLC25A19Q9HC21 320 aa12.43□□□□□ -0.42
CBWD3-217ENST00000621474 SRA1Q9HD15 236 aaKnown RBP12.43□□□□□ -0.42
CBWD3-217ENST00000621474 EMC7Q9NPA0 242 aa12.43□□□□□ -0.42
CBWD3-217ENST00000621474 SURF4O15260 269 aa12.42□□□□□ -0.42
CBWD3-217ENST00000621474 KHDRBS3O75525 346 aaKnown RBP12.42□□□□□ -0.42
CBWD3-217ENST00000621474 RENP00797 406 aa12.42□□□□□ -0.42
CBWD3-217ENST00000621474 ALPLP05186 524 aa12.42□□□□□ -0.42
CBWD3-217ENST00000621474 CLUP10909 449 aa12.42□□□□□ -0.42
CBWD3-217ENST00000621474 ZNF32P17041 273 aa12.42□□□□□ -0.42
CBWD3-217ENST00000621474 MSR1P21757 451 aa12.42□□□□□ -0.42
CBWD3-217ENST00000621474 CRABP1P29762 137 aa12.42□□□□□ -0.42
CBWD3-217ENST00000621474 GRK5P34947 590 aa12.42□□□□□ -0.42
CBWD3-217ENST00000621474 NAAAQ02083 359 aa12.42□□□□□ -0.42
CBWD3-217ENST00000621474 PTGES3Q15185 160 aaKnown RBP12.42□□□□□ -0.42
CBWD3-217ENST00000621474 ZNF672Q499Z4 452 aaPredicted RBP12.42□□□□□ -0.42
CBWD3-217ENST00000621474 GLB1L2Q8IW92 636 aa12.42□□□□□ -0.42
CBWD3-217ENST00000621474 MOV10Q9HCE1 1003 aaKnown RBP12.42□□□□□ -0.42
CBWD3-217ENST00000621474 MOKQ9UQ07 419 aa12.42□□□□□ -0.42
CBWD3-217ENST00000621474 FKBP7Q9Y680 259 aa12.42□□□□□ -0.42
CBWD3-217ENST00000621474 CCDC168Q8NDH2 2452 aa12.42□□□□□ -0.42
CBWD3-217ENST00000621474 FAM183AA6NL82 134 aa12.41□□□□□ -0.42
CBWD3-217ENST00000621474 FAM171A2A8MVW0 826 aa12.41□□□□□ -0.42
CBWD3-217ENST00000621474 ATP6V1G2-DDX39BF2Z307 99 aa12.41□□□□□ -0.42
CBWD3-217ENST00000621474 EI24O14681 340 aa12.41□□□□□ -0.42
CBWD3-217ENST00000621474 TFP02787 698 aa12.41□□□□□ -0.42
CBWD3-217ENST00000621474 CST2P09228 141 aa12.41□□□□□ -0.42
CBWD3-217ENST00000621474 IGFBP5P24593 272 aa12.41□□□□□ -0.42
CBWD3-217ENST00000621474 POLR2IP36954 125 aaKnown RBP12.41□□□□□ -0.42
CBWD3-217ENST00000621474 ESRRGP62508 458 aa12.41□□□□□ -0.42
CBWD3-217ENST00000621474 RAB39AQ14964 217 aa12.41□□□□□ -0.42
CBWD3-217ENST00000621474 KCNMB1Q16558 191 aa12.41□□□□□ -0.42
CBWD3-217ENST00000621474 MEP1BQ16820 701 aa12.41□□□□□ -0.42
CBWD3-217ENST00000621474 SLC36A2Q495M3 483 aa12.41□□□□□ -0.42
CBWD3-217ENST00000621474 LYPD4Q6UWN0 246 aa12.41□□□□□ -0.42
CBWD3-217ENST00000621474 CPEB3Q8NE35 698 aaKnown RBP12.41□□□□□ -0.42
CBWD3-217ENST00000621474 SLC26A10Q8NG04 563 aa12.41□□□□□ -0.42
CBWD3-217ENST00000621474 OR9Q1Q8NGQ5 310 aa12.41□□□□□ -0.42
CBWD3-217ENST00000621474 IGFBPL1Q8WX77 278 aa12.41□□□□□ -0.42
CBWD3-217ENST00000621474 C11orf40Q8WZ69 217 aa12.41□□□□□ -0.42
CBWD3-217ENST00000621474 AKAP1Q92667 903 aaKnown RBP eCLIP12.41□□□□□ -0.42
CBWD3-217ENST00000621474 PTP4A1Q93096 173 aa12.41□□□□□ -0.42
CBWD3-217ENST00000621474 MRPL22Q9NWU5 206 aaKnown RBP12.41□□□□□ -0.42
CBWD3-217ENST00000621474 KLHL21Q9UJP4 597 aa12.41□□□□□ -0.42
CBWD3-217ENST00000621474 TEX15Q9BXT5 2789 aa12.41□□□□□ -0.42
CBWD3-217ENST00000621474 IGHV2OR16-5A0A0B4J2B6 119 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 ZAR1LA6NP61 321 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 HS3ST1O14792 307 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 MAST4O15021 2626 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 SERPINA5P05154 406 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 GYPBP06028 91 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 PSKH1P11801 424 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 ZNF35P13682 527 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 PSG4Q00888 419 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 LINC01590Q5TEZ4 76 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 ARFGEF3Q5TH69 2177 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 SLC22A25Q6T423 547 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 PAMR1Q6UXH9 720 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 DPPA2Q7Z7J5 298 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 OR51L1Q8NGJ5 315 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 SLC29A1Q99808 456 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 RBM4BQ9BQ04 359 aaKnown RBP12.4□□□□□ -0.42
CBWD3-217ENST00000621474 GABARAPL3Q9BY60 117 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 MED20Q9H944 212 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 USE1Q9NZ43 259 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 E7EQL1 145 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 E9PQ18 207 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 RAB36O95755 333 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 DANCRP0C864 163 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 ZNF3P17036 446 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 SPI1P17947 270 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 PYCR1P32322 319 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms