RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 PIGAP37287 484 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 VIPR2P41587 438 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 EVX1P49640 407 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 C11orf87Q6NUJ2 197 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 C6orf201Q7Z4U5 140 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 APIPQ96GX9 242 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 TRBV4-1A0A0J9YWV2 114 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 TACR1P25103 407 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 TGFBR1P36897 503 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 XCR1P46094 333 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 SLC6A11P48066 632 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 RPS24P62847 133 aaKnown RBP13.89□□□□□ -0.19
COL5A1-208ENST00000618395 ENTPD8Q5MY95 495 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 FKBP1CQ5VVH2 108 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 OR52N1Q8NH53 320 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 SUSD2Q9UGT4 822 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 GPR32O75388 356 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 CBR3O75828 277 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 AGBL4Q5VU57 503 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 PQLC3Q8N755 202 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 OR51A2Q8NGJ7 313 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 DDTP30046 118 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 ZNF93P35789 620 aaPredicted RBP13.89□□□□□ -0.19
COL5A1-208ENST00000618395 UBE2NP61088 152 aaKnown RBP13.89□□□□□ -0.19
COL5A1-208ENST00000618395 PLPP4Q5VZY2 271 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 ZNF600Q6ZNG1 722 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 MFSD4AQ8N468 514 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 CSNK1A1LQ8N752 337 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 OR2M3Q8NG83 312 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 TMEM191AQ9H0A3 160 aa13.89□□□□□ -0.19
COL5A1-208ENST00000618395 NUP98P52948 1817 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 EPXP11678 715 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 CD52P31358 61 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 MEOX1P50221 254 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 TSPAN31Q12999 210 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 OR2W3Q7Z3T1 314 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 ZIC5Q96T25 663 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 HSPB8Q9UJY1 196 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 ARFGEF2Q9Y6D5 1785 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 CAPNS2Q96L46 248 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 APLNRP35414 380 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 INHBEP58166 350 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 SLC36A2Q495M3 483 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 OR51F2Q8NH61 342 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 SCAMP5Q8TAC9 235 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 GPR174Q9BXC1 333 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 HS3ST4Q9Y661 456 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 AKAP6Q13023 2319 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 HEATR5AQ86XA9 2040 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 KLK3P07288 261 aaPredicted RBP13.88□□□□□ -0.19
COL5A1-208ENST00000618395 TYRP1P17643 537 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 CD200P41217 278 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 PIGPP57054 158 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 HTRA3P83110 453 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 PNRC1Q12796 327 aaPredicted RBP13.88□□□□□ -0.19
COL5A1-208ENST00000618395 ASB11Q8WXH4 323 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 CCL16O15467 120 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 ZNF264O43296 627 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 AKR7A3O95154 331 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 FBLP22087 321 aaKnown RBP13.88□□□□□ -0.19
COL5A1-208ENST00000618395 LEXMQ3ZCV2 418 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 H2BFWTQ7Z2G1 175 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 PKIBQ9C010 78 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 CLMPQ9H6B4 373 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 OR7C2O60412 319 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 PDE7AQ13946 482 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 RNF113BQ8IZP6 322 aaKnown RBP13.88□□□□□ -0.19
COL5A1-208ENST00000618395 AMBRA1Q9C0C7 1298 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 LRIT1Q9P2V4 623 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 SHPRHQ149N8 1683 aa13.88□□□□□ -0.19
COL5A1-208ENST00000618395 SCN4AP35499 1836 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 HSPB6O14558 160 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 HSD17B6O14756 317 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 GABRA6Q16445 453 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 OR7E24Q6IFN5 339 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 FBXL22Q6P050 247 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 KCNJ15Q99712 375 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 TRAPPC2LQ9UL33 140 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 GABRQQ9UN88 632 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 FOXK1P85037 733 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 SSBP1Q04837 148 aaKnown RBP13.87□□□□□ -0.19
COL5A1-208ENST00000618395 GPR55Q9Y2T6 319 aaPredicted RBP13.87□□□□□ -0.19
COL5A1-208ENST00000618395 SPNP16150 400 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 BSGP35613 385 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 TIGD5Q53EQ6 642 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 FUBP3Q96I24 572 aaKnown RBP eCLIP13.87□□□□□ -0.19
COL5A1-208ENST00000618395 LHX3Q9UBR4 397 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 B4GALT7Q9UBV7 327 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 CTSLP07711 333 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 PTHLHP12272 177 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 GP2P55259 537 aaKnown RBP13.87□□□□□ -0.19
COL5A1-208ENST00000618395 PJVKQ0ZLH3 352 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 PTPRCAPQ14761 206 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 TMEM241Q24JQ0 296 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 C12orf54Q6X4T0 127 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 IL22RA1Q8N6P7 574 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 OR10P1Q8NGE3 313 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 LINC00052Q96N35 136 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 SLC2A11Q9BYW1 496 aa13.87□□□□□ -0.19
COL5A1-208ENST00000618395 IGSF5Q9NSI5 407 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms