RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 ACOXLQ9NUZ1 547 aa12.6□□□□□ -0.39
CIITA-213ENST00000618327 DNAJB6O75190 326 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 CNN3Q15417 329 aaKnown RBP12.59□□□□□ -0.39
CIITA-213ENST00000618327 SLC36A2Q495M3 483 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 AKR1C8PQ5T2L2 129 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 MMP25Q9NPA2 562 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 SLC22A11Q9NSA0 550 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 PILRBQ9UKJ0 227 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 HDGFL3Q9Y3E1 203 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 DOCK4Q8N1I0 1966 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 CHD5Q8TDI0 1954 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 IGLV3-19P01714 112 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 C1QCP02747 245 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 IDH3GP51553 393 aaPredicted RBP12.59□□□□□ -0.39
CIITA-213ENST00000618327 CYCSP99999 105 aaKnown RBP12.59□□□□□ -0.39
CIITA-213ENST00000618327 SSPNQ14714 243 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 SLC10A1Q14973 349 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 CBLN3Q6UW01 205 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 FCRLAQ7L513 359 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 GJC3Q8NFK1 279 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 OR4Q3Q8NH05 313 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 PHYHIPQ92561 330 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 RAB33BQ9H082 229 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 A0A1W2PQ09 198 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 PRAF2O60831 178 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 SFXN4Q6P4A7 337 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 OR5L1Q8NGL2 311 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 OR13C9Q8NGT0 318 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 OR2Y1Q8NGV0 311 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 PTPMT1Q8WUK0 201 aaPredicted RBP12.59□□□□□ -0.39
CIITA-213ENST00000618327 ZNF501Q96CX3 271 aaPredicted RBP12.59□□□□□ -0.39
CIITA-213ENST00000618327 OXGR1Q96P68 337 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 THAP7Q9BT49 309 aaPredicted RBP12.59□□□□□ -0.39
CIITA-213ENST00000618327 DEFB127Q9H1M4 99 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 ANKRD30BLA7E2S9 258 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 H3BUI4 141 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 DOK2O60496 412 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 ALDOBP05062 364 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 QDPRP09417 244 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 BMP4P12644 408 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 SLC37A1P57057 533 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 SLC22A6Q4U2R8 563 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 TMEM185AQ8NFB2 350 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 NUBPLQ8TB37 319 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 KCNE4Q8WWG9 221 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 PPA2Q9H2U2 334 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 TIMM8BQ9Y5J9 83 aaPredicted RBP12.59□□□□□ -0.39
CIITA-213ENST00000618327 PCM1Q15154 2024 aa12.59□□□□□ -0.39
CIITA-213ENST00000618327 TCRBV16S1A1N1A0A5B0 115 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 CXCL13O43927 109 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 CLEC2LP0C7M8 214 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 GCH1P30793 250 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 RFC3P40938 356 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 PPIAP62937 165 aaKnown RBP12.58□□□□□ -0.4
CIITA-213ENST00000618327 MRPS10P82664 201 aaKnown RBP12.58□□□□□ -0.4
CIITA-213ENST00000618327 CDK5Q00535 292 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 POU4F3Q15319 338 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 FGF20Q9NP95 211 aaPredicted RBP12.58□□□□□ -0.4
CIITA-213ENST00000618327 OR52A1Q9UKL2 312 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 P2RY10O00398 339 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 ZNF254O75437 659 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 IFNA4P05014 189 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 UBCP0CG48 685 aaKnown RBP12.58□□□□□ -0.4
CIITA-213ENST00000618327 SNRPBP14678 240 aaKnown RBP12.58□□□□□ -0.4
CIITA-213ENST00000618327 ALDH3B1P43353 468 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 DSCR4P56555 118 aaPredicted RBP12.58□□□□□ -0.4
CIITA-213ENST00000618327 LTBQ06643 244 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 PCGF3Q3KNV8 242 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 THEM4Q5T1C6 240 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 C3P1Q6ZMU1 363 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 LAX1Q8IWV1 398 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 OR4D11Q8NGI4 311 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 CNTNAP3BQ96NU0 1288 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 SORCS2Q96PQ0 1159 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 ENY2Q9NPA8 101 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 SPTBP11277 2137 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 RAB40ALP0C0E4 278 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 RPS18P62269 152 aaKnown RBP12.58□□□□□ -0.4
CIITA-213ENST00000618327 RBPJQ06330 500 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 DEFB109BQ30KR1 87 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 CD300LDQ6UXZ3 194 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 GPR119Q8TDV5 335 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 RAB40AQ8WXH6 277 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 APH1AQ96BI3 265 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 TMEM68Q96MH6 324 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 ZNF436Q9C0F3 470 aaPredicted RBP12.58□□□□□ -0.4
CIITA-213ENST00000618327 QPCTLQ9NXS2 382 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 NUBP2Q9Y5Y2 271 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 ZNF850A8MQ14 1090 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 FFAR1O14842 300 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 IFNA17P01571 189 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 IGHV3-9P01782 118 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 ITGB2P05107 769 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 CPEP16870 476 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 CLDN12P56749 244 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 GK2Q14410 553 aaPredicted RBP12.58□□□□□ -0.4
CIITA-213ENST00000618327 OIT3Q8WWZ8 545 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 SIAEQ9HAT2 523 aa12.58□□□□□ -0.4
CIITA-213ENST00000618327 NAP1L6A6NFF2 107 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 RPS19P39019 145 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms