RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 YTHDF1Q9BYJ9 559 aaKnown RBP7.07□□□□□ -1.28
PCDH9-205ENST00000614931 TTTY10Q9BZA0 68 aa7.07□□□□□ -1.28
PCDH9-205ENST00000614931 ULBP2Q9BZM5 246 aa7.07□□□□□ -1.28
PCDH9-205ENST00000614931 LINC00470Q9BZP3 86 aa7.07□□□□□ -1.28
PCDH9-205ENST00000614931 WDR76Q9H967 626 aa7.07□□□□□ -1.28
PCDH9-205ENST00000614931 GPR35Q9HC97 309 aa7.07□□□□□ -1.28
PCDH9-205ENST00000614931 EMC7Q9NPA0 242 aa7.07□□□□□ -1.28
PCDH9-205ENST00000614931 HAO2Q9NYQ3 351 aa7.07□□□□□ -1.28
PCDH9-205ENST00000614931 COQ3Q9NZJ6 369 aa7.07□□□□□ -1.28
PCDH9-205ENST00000614931 CNOT2Q9NZN8 540 aaKnown RBP7.07□□□□□ -1.28
PCDH9-205ENST00000614931 Q9UFV3 132 aa7.07□□□□□ -1.28
PCDH9-205ENST00000614931 WARS2Q9UGM6 360 aaKnown RBP7.07□□□□□ -1.28
PCDH9-205ENST00000614931 COPS3Q9UNS2 423 aa7.07□□□□□ -1.28
PCDH9-205ENST00000614931 RPL36Q9Y3U8 105 aaKnown RBP7.07□□□□□ -1.28
PCDH9-205ENST00000614931 TEX15Q9BXT5 2789 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 TRIM64CA6NLI5 447 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 PTGES3LE9PB15 166 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 CGAP01215 116 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 IGHA1P01876 353 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 ITGA5P08648 1049 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 CRABP1P29762 137 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 C21orf33P30042 268 aaPredicted RBP7.06□□□□□ -1.28
PCDH9-205ENST00000614931 MAP2K4P45985 399 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 CENPAP49450 140 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 ROR2Q01974 943 aaKnown RBP7.06□□□□□ -1.28
PCDH9-205ENST00000614931 ZNF85Q03923 595 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 PMPCAQ10713 525 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 CEACAM16Q2WEN9 425 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 THEM4Q5T1C6 240 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 LCN1P1Q5VSP4 162 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 C9orf135Q5VTT2 229 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 ZNF773Q6PK81 442 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.06□□□□□ -1.28
PCDH9-205ENST00000614931 CDC20BQ86Y33 519 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 ERI1Q8IV48 349 aaKnown RBP7.06□□□□□ -1.28
PCDH9-205ENST00000614931 ZNF100Q8IYN0 542 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 ZNF295-AS1Q8N0V1 137 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 GPR137CQ8N3F9 429 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 CNEP1R1Q8N9A8 125 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 OR6K3Q8NGY3 331 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 OR6N2Q8NGY6 317 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 ASB5Q8WWX0 329 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 C11orf40Q8WZ69 217 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 RFKQ969G6 155 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 APH1AQ96BI3 265 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 STARD4Q96DR4 205 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 RBP7Q96R05 134 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 AMELYQ99218 206 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 TBX5Q99593 518 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 SPOCK3Q9BQ16 436 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 COPS4Q9BT78 406 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 OPN3Q9H1Y3 402 aaPredicted RBP7.06□□□□□ -1.28
PCDH9-205ENST00000614931 NELFAQ9H3P2 528 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 FGF20Q9NP95 211 aaPredicted RBP7.06□□□□□ -1.28
PCDH9-205ENST00000614931 GLRX2Q9NS18 164 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 SCN3BQ9NY72 215 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 H2AFY2Q9P0M6 372 aaPredicted RBP7.06□□□□□ -1.28
PCDH9-205ENST00000614931 MALT1Q9UDY8 824 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 CLEC2DQ9UHP7 191 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 KCNG2Q9UJ96 466 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.06□□□□□ -1.28
PCDH9-205ENST00000614931 DIMT1Q9UNQ2 313 aaKnown RBP7.06□□□□□ -1.28
PCDH9-205ENST00000614931 MOKQ9UQ07 419 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 EMC9Q9Y3B6 208 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 TPRKBQ9Y3C4 175 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 ITPR2Q14571 2701 aa7.06□□□□□ -1.28
PCDH9-205ENST00000614931 HCFC1P51610 2035 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 MAGEA13PA6NCF6 341 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 EFCAB10A6NFE3 127 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 RPL36A-HNRNPH2H7BZ11 118 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 MAGEB4O15481 346 aaPredicted RBP7.05□□□□□ -1.28
PCDH9-205ENST00000614931 RGS10O43665 173 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 RAB36O95755 333 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 FADS2O95864 444 aaKnown RBP7.05□□□□□ -1.28
PCDH9-205ENST00000614931 IL18BPO95998 194 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 IL2RAP01589 272 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 HOXD4P09016 255 aaPredicted RBP7.05□□□□□ -1.28
PCDH9-205ENST00000614931 LIMS3P0CW19 117 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 LIMS4P0CW20 117 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 B4GALT1P15291 398 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 IGFBP2P18065 325 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 PCMT1P22061 227 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 LAP3P28838 519 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 CHRNB4P30926 498 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 ETV1P50549 477 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 CSNK2BP67870 215 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 HSF2Q03933 536 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 RAB40BQ12829 278 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 FAPQ12884 760 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 TMED1Q13445 227 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 ENDOGQ14249 297 aaKnown RBP7.05□□□□□ -1.28
PCDH9-205ENST00000614931 SF3B4Q15427 424 aaKnown RBP eCLIP7.05□□□□□ -1.28
PCDH9-205ENST00000614931 KCNMB1Q16558 191 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 RIPPLY2Q5TAB7 128 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 OR2A2Q6IF42 318 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 DNM1P34Q6PK57 102 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 KLHL24Q6TFL4 600 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 LIX1LQ8IVB5 337 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 LINC00346Q8IVM7 164 aa7.05□□□□□ -1.28
PCDH9-205ENST00000614931 GLB1L2Q8IW92 636 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms