RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 ZNF140P52738 457 aaPredicted RBP8.1□□□□□ -1.11
TTC28-208ENST00000612946 HYAL2Q12891 473 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 TMEM229BQ8NBD8 167 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 SERINC2Q96SA4 455 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 ARHGAP9Q9BRR9 750 aa8.1□□□□□ -1.11
TTC28-208ENST00000612946 TMEM269A0A1B0GVZ9 245 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 CLEC3BP05452 202 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 ACP5P13686 325 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 ASCL1P50553 236 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 UBE2G1P62253 170 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 DMWDQ09019 674 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 SHEQ5VZ18 495 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 AMIGO3Q86WK7 504 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 ZNRF4Q8WWF5 429 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 SORBS1Q9BX66 1292 aaKnown RBP8.09□□□□□ -1.11
TTC28-208ENST00000612946 BANF2Q9H503 90 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 PLEKHF2Q9H8W4 249 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 HSPB8Q9UJY1 196 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 C5orf52A6NGY3 159 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 GPX5O75715 221 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 AADACL3Q5VUY0 350 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 REC114Q7Z4M0 266 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 INTS12Q96CB8 462 aaKnown RBP8.09□□□□□ -1.11
TTC28-208ENST00000612946 TOE1Q96GM8 510 aaKnown RBP8.09□□□□□ -1.11
TTC28-208ENST00000612946 LHX3Q9UBR4 397 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 TBX19O60806 448 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 FUT1P19526 365 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 ZNF93P35789 620 aaPredicted RBP8.09□□□□□ -1.11
TTC28-208ENST00000612946 ERVFRD-1P60508 538 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 ETFDHQ16134 617 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 VITQ6UXI7 678 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 OR10A7Q8NGE5 316 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 SLC6A18Q96N87 628 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 NMES1Q9C002 83 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 TMEM191AQ9H0A3 160 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 FBRSQ9HAH7 460 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 UQCR10Q9UDW1 63 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 TAS2R60P59551 318 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 OC90Q02509 493 aaPredicted RBP8.09□□□□□ -1.11
TTC28-208ENST00000612946 SGCAQ16586 387 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 XKR7Q5GH72 579 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 DHRS11Q6UWP2 260 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 IL20RBQ6UXL0 311 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 CD84Q9UIB8 345 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 MSRAQ9UJ68 235 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 ANK1P16157 1881 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 CSNK1EP49674 416 aaKnown RBP8.09□□□□□ -1.11
TTC28-208ENST00000612946 AQP6Q13520 282 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 POM121L1PQ3SYA9 428 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 ZNF600Q6ZNG1 722 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 RPS27LQ71UM5 84 aaKnown RBP8.09□□□□□ -1.11
TTC28-208ENST00000612946 DTD1Q8TEA8 209 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 BLNKQ8WV28 456 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 ELOVL3Q9HB03 270 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 C11orf98E9PRG8 122 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 NTF3P20783 257 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 OMGP23515 440 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 GABRR1P24046 479 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 LIMK1P53667 647 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 FCRL6Q6DN72 434 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 GPR137CQ8N3F9 429 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 DLL4Q9NR61 685 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 FKBP11Q9NYL4 201 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 SSC5DA1L4H1 1573 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 GVINP1Q7Z2Y8 2422 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 ZNF593O00488 134 aaPredicted RBP8.09□□□□□ -1.11
TTC28-208ENST00000612946 ST8SIA5O15466 376 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 ADH4P08319 380 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 QDPRP09417 244 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 FKBP2P26885 142 aaKnown RBP8.09□□□□□ -1.11
TTC28-208ENST00000612946 PDGFRLQ15198 375 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 OTOP2Q7RTS6 562 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 OR52I2Q8NH67 350 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 MOGAT1Q96PD6 335 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 WSB1Q9Y6I7 421 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 WNK2Q9Y3S1 2297 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 NDUFS8O00217 210 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 MT-ATP6P00846 226 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 RAD52P43351 418 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 OR2G6Q5TZ20 316 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 XAF1Q6GPH4 301 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 PRICKLE2Q7Z3G6 844 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 RIMKLAQ8IXN7 391 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 IGFLR1Q9H665 355 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 PRTFDC1Q9NRG1 225 aa8.09□□□□□ -1.11
TTC28-208ENST00000612946 COL2A1P02458 1487 aaPredicted RBP8.09□□□□□ -1.12
TTC28-208ENST00000612946 FAM183AA6NL82 134 aa8.09□□□□□ -1.12
TTC28-208ENST00000612946 MIDNQ504T8 468 aa8.09□□□□□ -1.12
TTC28-208ENST00000612946 BTNL3Q6UXE8 466 aa8.09□□□□□ -1.12
TTC28-208ENST00000612946 CLECL1Q8IZS7 167 aa8.09□□□□□ -1.12
TTC28-208ENST00000612946 CLDN19Q8N6F1 224 aa8.09□□□□□ -1.12
TTC28-208ENST00000612946 NDRG1Q92597 394 aaKnown RBP8.09□□□□□ -1.12
TTC28-208ENST00000612946 COL25A1Q9BXS0 654 aaPredicted RBP8.09□□□□□ -1.12
TTC28-208ENST00000612946 PRSS16Q9NQE7 514 aa8.09□□□□□ -1.12
TTC28-208ENST00000612946 ZNF541Q9H0D2 1346 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 WDR81Q562E7 1941 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 OR8U8P0C7N1 319 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 OR3A1P47881 315 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 ZNF805Q5CZA5 627 aa8.08□□□□□ -1.12
TTC28-208ENST00000612946 ENTPD8Q5MY95 495 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms