RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 TMEM129A0AVI4 362 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 SLC22A23A1A5C7 686 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 HTR3EA5X5Y0 456 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 CENPBD1B2RD01 187 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 LYNX1G3V0Z9 82 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 MGRN1O60291 552 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 SLC16A7O60669 478 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 CLPTM1O96005 669 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 LYNX1P0DP58 116 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 ZNF133P52736 654 aaPredicted RBP12.47□□□□□ -0.41
HDDC2-204ENST00000608295 KRTAP1-1Q07627 177 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 ENDOGQ14249 297 aaKnown RBP12.47□□□□□ -0.41
HDDC2-204ENST00000608295 GGTLC2Q14390 218 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 EFNB3Q15768 340 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 CLEC12AQ5QGZ9 265 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 THEM4Q5T1C6 240 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 ZNF774Q6NX45 483 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 SMARCD3Q6STE5 483 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 TRPM8Q7Z2W7 1104 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 IL17RDQ8NFM7 739 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 MRPL24Q96A35 216 aaKnown RBP12.47□□□□□ -0.41
HDDC2-204ENST00000608295 SAMD8Q96LT4 415 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 TSSK2Q96PF2 358 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 IFT27Q9BW83 186 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 ZNF416Q9BWM5 594 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 OR52D1Q9H346 318 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 EGLN3Q9H6Z9 239 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 SIAEQ9HAT2 523 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 SMURF2Q9HAU4 748 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 FAM53CQ9NYF3 392 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 FBXL3Q9UKT7 428 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 POLR1DQ9Y2S0 133 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 U3KQV3 271 aa12.47□□□□□ -0.41
HDDC2-204ENST00000608295 PRSS37A4D1T9 235 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 C5orf49A4QMS7 147 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 VSTM5A8MXK1 200 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 M0R233 179 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 TNFRSF11BO00300 401 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 MPZL1O95297 269 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 HOXB4P17483 251 aaPredicted RBP12.46□□□□□ -0.41
HDDC2-204ENST00000608295 MSR1P21757 451 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 STOMP27105 288 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 SDHAP31040 664 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 PPOXP50336 477 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 SMIM11AP58511 58 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 PSG4Q00888 419 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 ANKDD1AQ495B1 522 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 LCN8Q6JVE9 175 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 RGS7BPQ6MZT1 257 aaPredicted RBP12.46□□□□□ -0.41
HDDC2-204ENST00000608295 PGBD2Q6P3X8 592 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 DNM1P46Q6ZS02 220 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 RFPL4BQ6ZWI9 263 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 GTF3AQ92664 365 aaKnown RBP12.46□□□□□ -0.41
HDDC2-204ENST00000608295 LRGUKQ96M69 825 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 BTBD10Q9BSF8 475 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 OR2H1Q9GZK4 316 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 WNT5BQ9H1J7 359 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 IL1RAPQ9NPH3 570 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 NRIP3Q9NQ35 241 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 POLE4Q9NR33 117 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 TAS2R1Q9NYW7 299 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 LYVE1Q9Y5Y7 322 aa12.46□□□□□ -0.41
HDDC2-204ENST00000608295 NF1P21359 2839 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 FAM171A2A8MVW0 826 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 DOK2O60496 412 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 PTP4A3O75365 173 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 SOX14O95416 240 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 F12P00748 615 aaPredicted RBP12.45□□□□□ -0.42
HDDC2-204ENST00000608295 TP53P04637 393 aaPredicted RBP12.45□□□□□ -0.42
HDDC2-204ENST00000608295 IGFBP1P08833 259 aaPredicted RBP12.45□□□□□ -0.42
HDDC2-204ENST00000608295 NAT2P11245 290 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 SLC6A6P31641 620 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 GLRXP35754 106 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 GUCA1AP43080 201 aaPredicted RBP12.45□□□□□ -0.42
HDDC2-204ENST00000608295 PDLIM4P50479 330 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 RPS6KA3P51812 740 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 RPS23P62266 143 aaKnown RBP12.45□□□□□ -0.42
HDDC2-204ENST00000608295 MEP1BQ16820 701 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 NKPD1Q17RQ9 610 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 SLC35F1Q5T1Q4 408 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 LEG1Q6P5S2 330 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 JAZF1Q86VZ6 243 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 ZNF101Q8IZC7 436 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 SDR9C7Q8NEX9 313 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 OR1J1Q8NGS3 322 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 OR4K13Q8NH42 304 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 C10orf105Q8TEF2 133 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 POM121Q96HA1 1249 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 NMNAT3Q96T66 252 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 DOK1Q99704 481 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 PIMREGQ9BSJ6 248 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 NUAK2Q9H093 628 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 RAB1BQ9H0U4 201 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 PRPF19Q9UMS4 504 aaKnown RBP12.45□□□□□ -0.42
HDDC2-204ENST00000608295 COA3Q9Y2R0 106 aaPredicted RBP12.45□□□□□ -0.42
HDDC2-204ENST00000608295 ABCA1O95477 2261 aa12.45□□□□□ -0.42
HDDC2-204ENST00000608295 NSD1Q96L73 2696 aaPredicted RBP12.45□□□□□ -0.42
HDDC2-204ENST00000608295 ZFHX3Q15911 3703 aa12.44□□□□□ -0.42
HDDC2-204ENST00000608295 LOC100509620A0A075B734 347 aa12.44□□□□□ -0.42
HDDC2-204ENST00000608295 DCTN6O00399 190 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms