RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 ZNF362Q5T0B9 420 aaPredicted RBP12.41□□□□□ -0.42
CTSA-219ENST00000607841 IQCF1Q8N6M8 205 aa12.41□□□□□ -0.42
CTSA-219ENST00000607841 HTRA1Q92743 480 aa12.41□□□□□ -0.42
CTSA-219ENST00000607841 PLEKHA8Q96JA3 519 aa12.41□□□□□ -0.42
CTSA-219ENST00000607841 TSSK2Q96PF2 358 aa12.41□□□□□ -0.42
CTSA-219ENST00000607841 DDOQ99489 341 aa12.41□□□□□ -0.42
CTSA-219ENST00000607841 C9orf16Q9BUW7 83 aa12.41□□□□□ -0.42
CTSA-219ENST00000607841 C1orf198Q9H425 327 aa12.41□□□□□ -0.42
CTSA-219ENST00000607841 PLEKHF2Q9H8W4 249 aa12.41□□□□□ -0.42
CTSA-219ENST00000607841 SLC25A19Q9HC21 320 aa12.41□□□□□ -0.42
CTSA-219ENST00000607841 POU2F3Q9UKI9 436 aa12.41□□□□□ -0.42
CTSA-219ENST00000607841 TIMM10BQ9Y5J6 103 aa12.41□□□□□ -0.42
CTSA-219ENST00000607841 IGLV1-36A0A0B4J1U3 117 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 IQCMA0A1B0GVH7 501 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 HLA-DQA2P01906 255 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 SERPINA5P05154 406 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 ZNF14P17017 642 aaPredicted RBP12.4□□□□□ -0.42
CTSA-219ENST00000607841 BLVRAP53004 296 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 NAAAQ02083 359 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 HSF2Q03933 536 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 SCRN3Q0VDG4 424 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 DAG1Q14118 895 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 PTGES3Q15185 160 aaKnown RBP12.4□□□□□ -0.42
CTSA-219ENST00000607841 KCNMB1Q16558 191 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 ACSM5Q6NUN0 579 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 C20orf204Q6ZNR8 217 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 ALDH16A1Q8IZ83 802 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 CYB561A3Q8NBI2 242 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 PROKR2Q8NFJ6 384 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 FGFBP3Q8TAT2 258 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 AKAP1Q92667 903 aaKnown RBP eCLIP12.4□□□□□ -0.42
CTSA-219ENST00000607841 EME1Q96AY2 570 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 CIB1Q99828 191 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 ZNF416Q9BWM5 594 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 UBTD1Q9HAC8 227 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 USE1Q9NZ43 259 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 CACNA1DQ01668 2161 aa12.4□□□□□ -0.42
CTSA-219ENST00000607841 A0A1W2PPR1 153 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 DCTN6O00399 190 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 HS3ST1O14792 307 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 SURF4O15260 269 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 MITFO75030 526 aaPredicted RBP12.39□□□□□ -0.43
CTSA-219ENST00000607841 PLAUP00749 431 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 MMP7P09237 267 aaPredicted RBP12.39□□□□□ -0.43
CTSA-219ENST00000607841 ZNF32P17041 273 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 ALDH3A2P51648 485 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 RAD23AP54725 363 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 CDH11P55287 796 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 AQP6Q13520 282 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 RAB39AQ14964 217 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 SNAPC1Q16533 368 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 ZNF672Q499Z4 452 aaPredicted RBP12.39□□□□□ -0.43
CTSA-219ENST00000607841 CBR4Q8N4T8 237 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 KBTBD8Q8NFY9 601 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 OR10H5Q8NGA6 315 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 OR4F15Q8NGB8 312 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 OR1J2Q8NGS2 313 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 C11orf40Q8WZ69 217 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 FBXW5Q969U6 566 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 OTULINQ96BN8 352 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 FBXO17Q96EF6 278 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 ZNF75AQ96N20 296 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 FOXN4Q96NZ1 517 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 CDADC1Q9BWV3 514 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 FN3KQ9H479 309 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 NOX3Q9HBY0 568 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 EMC7Q9NPA0 242 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 TVP23BQ9NYZ1 205 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 CISD1Q9NZ45 108 aaKnown RBP12.39□□□□□ -0.43
CTSA-219ENST00000607841 TMEFF2Q9UIK5 374 aaPredicted RBP12.39□□□□□ -0.43
CTSA-219ENST00000607841 MOKQ9UQ07 419 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 POLR1DQ9Y2S0 133 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 SPEF1Q9Y4P9 236 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 ATP23Q9Y6H3 246 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 ALPK2Q86TB3 2170 aa12.39□□□□□ -0.43
CTSA-219ENST00000607841 FAM171A2A8MVW0 826 aa12.38□□□□□ -0.43
CTSA-219ENST00000607841 VSTM5A8MXK1 200 aa12.38□□□□□ -0.43
CTSA-219ENST00000607841 SHISA9B4DS77 424 aa12.38□□□□□ -0.43
CTSA-219ENST00000607841 PRR23D1E9PI22 279 aaPredicted RBP12.38□□□□□ -0.43
CTSA-219ENST00000607841 EI24O14681 340 aa12.38□□□□□ -0.43
CTSA-219ENST00000607841 MPZL1O95297 269 aa12.38□□□□□ -0.43
CTSA-219ENST00000607841 ALPLP05186 524 aa12.38□□□□□ -0.43
CTSA-219ENST00000607841 SCG5P05408 212 aa12.38□□□□□ -0.43
CTSA-219ENST00000607841 CELA3BP08861 270 aa12.38□□□□□ -0.43
CTSA-219ENST00000607841 PRR23D2P0DMB1 279 aaPredicted RBP12.38□□□□□ -0.43
CTSA-219ENST00000607841 GAAP10253 952 aa12.38□□□□□ -0.43
CTSA-219ENST00000607841 ZNF823P16415 610 aa12.38□□□□□ -0.43
CTSA-219ENST00000607841 APLNRP35414 380 aa12.38□□□□□ -0.43
CTSA-219ENST00000607841 TEKQ02763 1124 aa12.38□□□□□ -0.43
CTSA-219ENST00000607841 SPOCK1Q08629 439 aa12.38□□□□□ -0.43
CTSA-219ENST00000607841 ENDOGQ14249 297 aaKnown RBP12.38□□□□□ -0.43
CTSA-219ENST00000607841 RCN1Q15293 331 aa12.38□□□□□ -0.43
CTSA-219ENST00000607841 TBC1D28Q2M2D7 210 aa12.38□□□□□ -0.43
CTSA-219ENST00000607841 PABPC1L2AQ5JQF8 200 aa12.38□□□□□ -0.43
CTSA-219ENST00000607841 TMEM236Q5W0B7 351 aa12.38□□□□□ -0.43
CTSA-219ENST00000607841 UGT2A3Q6UWM9 527 aa12.38□□□□□ -0.43
CTSA-219ENST00000607841 ZBTB49Q6ZSB9 765 aa12.38□□□□□ -0.43
CTSA-219ENST00000607841 ZNF611Q8N823 705 aa12.38□□□□□ -0.43
CTSA-219ENST00000607841 SLC30A7Q8NEW0 376 aa12.38□□□□□ -0.43
CTSA-219ENST00000607841 SLC26A10Q8NG04 563 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms