RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 PAQR4Q8N4S7 273 aaPredicted RBP12.34□□□□□ -0.43
PRDM16-210ENST00000607632 CPEB3Q8NE35 698 aaKnown RBP12.34□□□□□ -0.43
PRDM16-210ENST00000607632 NSMAFQ92636 917 aa12.34□□□□□ -0.43
PRDM16-210ENST00000607632 RASD2Q96D21 266 aa12.34□□□□□ -0.43
PRDM16-210ENST00000607632 CLPTM1LQ96KA5 538 aa12.34□□□□□ -0.43
PRDM16-210ENST00000607632 POM121L2Q96KW2 1035 aa12.34□□□□□ -0.43
PRDM16-210ENST00000607632 REG4Q9BYZ8 158 aa12.34□□□□□ -0.43
PRDM16-210ENST00000607632 OR52D1Q9H346 318 aa12.34□□□□□ -0.43
PRDM16-210ENST00000607632 POLE4Q9NR33 117 aa12.34□□□□□ -0.43
PRDM16-210ENST00000607632 CMAHPQ9Y471 501 aa12.34□□□□□ -0.43
PRDM16-210ENST00000607632 RTTNQ86VV8 2226 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 AQP12BA6NM10 295 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 H7C1C5 153 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 XKRYO14609 159 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 LY6G6DO95868 133 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 SCG5P05408 212 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 CSF3P09919 207 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 CTLA4P16410 223 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 MSR1P21757 451 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 LAP3P28838 519 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 RPS6KA3P51812 740 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 RPS23P62266 143 aaKnown RBP12.33□□□□□ -0.44
PRDM16-210ENST00000607632 LCN6P62502 163 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 PSG4Q00888 419 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 PLP2Q04941 152 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 GK3PQ14409 553 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 DNAL1Q4LDG9 190 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 PABPC1L2AQ5JQF8 200 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 AQP12AQ8IXF9 295 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 ADGRG5Q8IZF4 528 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 OR1J2Q8NGS2 313 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 FANK1Q8TC84 345 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 GNPDA2Q8TDQ7 276 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 C10orf105Q8TEF2 133 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 BTBD10Q9BSF8 475 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 THTPAQ9BU02 230 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 MRPL37Q9BZE1 423 aaKnown RBP12.33□□□□□ -0.44
PRDM16-210ENST00000607632 WNT5BQ9H1J7 359 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 KCNN2Q9H2S1 579 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 RNF121Q9H920 327 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 VNN3Q9NY84 501 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 IL20RAQ9UHF4 553 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 TMCC3Q9ULS5 477 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 IER3IP1Q9Y5U9 82 aa12.33□□□□□ -0.44
PRDM16-210ENST00000607632 IGLV3-9A0A075B6K5 115 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 IGHV4-30-2A0A087WSY4 118 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 IQCMA0A1B0GVH7 501 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 VWC2LB2RUY7 222 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 TNFRSF11BO00300 401 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 RAP2AP10114 183 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 COX5BP10606 129 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 ZNF250P15622 560 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 SLC6A6P31641 620 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 CDKN2AP42771 156 aaKnown RBP12.32□□□□□ -0.44
PRDM16-210ENST00000607632 PCBD1P61457 104 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 GALK2Q01415 458 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 KCNMB1Q16558 191 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 SGCAQ16586 387 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 TBC1D28Q2M2D7 210 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 FAM98BQ52LJ0 330 aaKnown RBP12.32□□□□□ -0.44
PRDM16-210ENST00000607632 OR2T5Q6IEZ7 315 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 CLEC2AQ6UVW9 174 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 CLEC9AQ6UXN8 241 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 SVOPLQ8N434 492 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 ZNF525Q8N782 197 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 OR2T29Q8NH02 315 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 RHNO1Q9BSD3 238 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 ZNF416Q9BWM5 594 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 OR2H1Q9GZK4 316 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 SYT4Q9H2B2 425 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 MYOZ1Q9NP98 299 aaPredicted RBP12.32□□□□□ -0.44
PRDM16-210ENST00000607632 CCNB1IP1Q9NPC3 277 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 IL20Q9NYY1 176 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 FKBP7Q9Y680 259 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 CSPG4Q6UVK1 2322 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 NIPBLQ6KC79 2804 aaeCLIP12.32□□□□□ -0.44
PRDM16-210ENST00000607632 TLN2Q9Y4G6 2542 aa12.32□□□□□ -0.44
PRDM16-210ENST00000607632 YLPM1P49750 1951 aaKnown RBP12.31□□□□□ -0.44
PRDM16-210ENST00000607632 LOC100509620A0A075B734 347 aa12.31□□□□□ -0.44
PRDM16-210ENST00000607632 C12orf71A8MTZ7 269 aa12.31□□□□□ -0.44
PRDM16-210ENST00000607632 RNF223E7ERA6 249 aa12.31□□□□□ -0.44
PRDM16-210ENST00000607632 SOCS2O14508 198 aa12.31□□□□□ -0.44
PRDM16-210ENST00000607632 SYNGR3O43761 229 aa12.31□□□□□ -0.44
PRDM16-210ENST00000607632 IDH3BO43837 385 aa12.31□□□□□ -0.44
PRDM16-210ENST00000607632 KHDRBS3O75525 346 aaKnown RBP12.31□□□□□ -0.44
PRDM16-210ENST00000607632 PPP1R3DO95685 299 aa12.31□□□□□ -0.44
PRDM16-210ENST00000607632 CCL2P13500 99 aa12.31□□□□□ -0.44
PRDM16-210ENST00000607632 SLC25A16P16260 332 aa12.31□□□□□ -0.44
PRDM16-210ENST00000607632 HOXB6P17509 224 aaKnown RBP12.31□□□□□ -0.44
PRDM16-210ENST00000607632 APEX1P27695 318 aaKnown RBP12.31□□□□□ -0.44
PRDM16-210ENST00000607632 APLNRP35414 380 aa12.31□□□□□ -0.44
PRDM16-210ENST00000607632 UCP2P55851 309 aa12.31□□□□□ -0.44
PRDM16-210ENST00000607632 LSM6P62312 80 aaKnown RBP12.31□□□□□ -0.44
PRDM16-210ENST00000607632 HSF2Q03933 536 aa12.31□□□□□ -0.44
PRDM16-210ENST00000607632 BNIP1Q12981 228 aa12.31□□□□□ -0.44
PRDM16-210ENST00000607632 KRTAP21-3Q3LHN1 58 aa12.31□□□□□ -0.44
PRDM16-210ENST00000607632 RPL13AP3Q6NVV1 102 aa12.31□□□□□ -0.44
PRDM16-210ENST00000607632 UGT2A3Q6UWM9 527 aa12.31□□□□□ -0.44
PRDM16-210ENST00000607632 RASSF6Q6ZTQ3 369 aa12.31□□□□□ -0.44
PRDM16-210ENST00000607632 OR9Q2Q8NGE9 314 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms