RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 MGRN1O60291 552 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 FOXH1O75593 365 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 MMP7P09237 267 aaPredicted RBP12.62□□□□□ -0.39
CTSA-216ENST00000607212 SBK2P0C263 348 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 EGR1P18146 543 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 TNFRSF1BP20333 461 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 GATA3P23771 443 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 PPP1CBP62140 327 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 MRPS34P82930 218 aaKnown RBP12.62□□□□□ -0.39
CTSA-216ENST00000607212 CBX1P83916 185 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 FMODQ06828 376 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 AWAT1Q58HT5 328 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 ZMAT1Q5H9K5 638 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 C10orf128Q5T292 105 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 NKAIN4Q8IVV8 208 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 ZNF101Q8IZC7 436 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 MOSPD2Q8NHP6 518 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 TMEM255BQ8WV15 326 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 TMEM239Q8WW34 195 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 GEMIN6Q8WXD5 167 aaKnown RBP12.62□□□□□ -0.39
CTSA-216ENST00000607212 RBP7Q96R05 134 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 PRSS27Q9BQR3 290 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 MRPL13Q9BYD1 178 aaKnown RBP12.62□□□□□ -0.39
CTSA-216ENST00000607212 MEPEQ9NQ76 525 aaPredicted RBP12.62□□□□□ -0.39
CTSA-216ENST00000607212 BAG5Q9UL15 447 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 MED31Q9Y3C7 131 aa12.62□□□□□ -0.39
CTSA-216ENST00000607212 ZSCAN5BA6NJL1 495 aa12.61□□□□□ -0.39
CTSA-216ENST00000607212 TNFSF4P23510 183 aa12.61□□□□□ -0.39
CTSA-216ENST00000607212 LIPAP38571 399 aa12.61□□□□□ -0.39
CTSA-216ENST00000607212 WNT5AP41221 380 aa12.61□□□□□ -0.39
CTSA-216ENST00000607212 RBM34P42696 430 aaKnown RBP12.61□□□□□ -0.39
CTSA-216ENST00000607212 ARFIP2P53365 341 aa12.61□□□□□ -0.39
CTSA-216ENST00000607212 UBA52P62987 128 aaKnown RBP12.61□□□□□ -0.39
CTSA-216ENST00000607212 TNFAIP6P98066 277 aaPredicted RBP12.61□□□□□ -0.39
CTSA-216ENST00000607212 HIST3H3Q16695 136 aa12.61□□□□□ -0.39
CTSA-216ENST00000607212 VMACQ2NL98 169 aa12.61□□□□□ -0.39
CTSA-216ENST00000607212 ALG10Q5BKT4 473 aa12.61□□□□□ -0.39
CTSA-216ENST00000607212 ARL9Q6T311 187 aa12.61□□□□□ -0.39
CTSA-216ENST00000607212 TSPYL5Q86VY4 417 aaPredicted RBP12.61□□□□□ -0.39
CTSA-216ENST00000607212 DPP10Q8N608 796 aa12.61□□□□□ -0.39
CTSA-216ENST00000607212 KLF14Q8TD94 323 aaPredicted RBP12.61□□□□□ -0.39
CTSA-216ENST00000607212 HDAC2Q92769 488 aaKnown RBP12.61□□□□□ -0.39
CTSA-216ENST00000607212 ECSITQ9BQ95 431 aa12.61□□□□□ -0.39
CTSA-216ENST00000607212 KAT8Q9H7Z6 458 aaKnown RBP12.61□□□□□ -0.39
CTSA-216ENST00000607212 ELOVL3Q9HB03 270 aa12.61□□□□□ -0.39
CTSA-216ENST00000607212 NTN4Q9HB63 628 aa12.61□□□□□ -0.39
CTSA-216ENST00000607212 MSL2Q9HCI7 577 aa12.61□□□□□ -0.39
CTSA-216ENST00000607212 C20orf141Q9NUB4 165 aa12.61□□□□□ -0.39
CTSA-216ENST00000607212 PCDHGB1Q9Y5G3 927 aa12.61□□□□□ -0.39
CTSA-216ENST00000607212 TANC2Q9HCD6 1990 aa12.61□□□□□ -0.39
CTSA-216ENST00000607212 LOC100509620A0A075B734 347 aa12.6□□□□□ -0.39
CTSA-216ENST00000607212 LAP3P28838 519 aa12.6□□□□□ -0.39
CTSA-216ENST00000607212 IFNA8P32881 189 aa12.6□□□□□ -0.39
CTSA-216ENST00000607212 PCBD1P61457 104 aa12.6□□□□□ -0.39
CTSA-216ENST00000607212 PSG4Q00888 419 aa12.6□□□□□ -0.39
CTSA-216ENST00000607212 PIN1Q13526 163 aaPredicted RBP12.6□□□□□ -0.39
CTSA-216ENST00000607212 CYLC2Q14093 348 aaPredicted RBP12.6□□□□□ -0.39
CTSA-216ENST00000607212 LAPTM4AQ15012 233 aa12.6□□□□□ -0.39
CTSA-216ENST00000607212 RFPL4BQ6ZWI9 263 aa12.6□□□□□ -0.39
CTSA-216ENST00000607212 SIGLECL1Q8N7X8 197 aa12.6□□□□□ -0.39
CTSA-216ENST00000607212 ZDHHC22Q8N966 263 aa12.6□□□□□ -0.39
CTSA-216ENST00000607212 MARS2Q96GW9 593 aaKnown RBP12.6□□□□□ -0.39
CTSA-216ENST00000607212 POM121L2Q96KW2 1035 aa12.6□□□□□ -0.39
CTSA-216ENST00000607212 DUX5Q96PT3 197 aa12.6□□□□□ -0.39
CTSA-216ENST00000607212 DIRC2Q96SL1 478 aa12.6□□□□□ -0.39
CTSA-216ENST00000607212 ZNF426Q9BUY5 554 aa12.6□□□□□ -0.39
CTSA-216ENST00000607212 OR2H1Q9GZK4 316 aa12.6□□□□□ -0.39
CTSA-216ENST00000607212 PCDHAC1Q9H158 963 aa12.6□□□□□ -0.39
CTSA-216ENST00000607212 ESM1Q9NQ30 184 aa12.6□□□□□ -0.39
CTSA-216ENST00000607212 INTS9Q9NV88 658 aaKnown RBP12.6□□□□□ -0.39
CTSA-216ENST00000607212 CGGBP1Q9UFW8 167 aaPredicted RBP12.6□□□□□ -0.39
CTSA-216ENST00000607212 RIMS3Q9UJD0 308 aa12.6□□□□□ -0.39
CTSA-216ENST00000607212 ZDHHC8Q9ULC8 765 aa12.6□□□□□ -0.39
CTSA-216ENST00000607212 NPTNQ9Y639 398 aa12.6□□□□□ -0.39
CTSA-216ENST00000607212 IGKV1D-43A0A0B4J1Z2 117 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 PIP5K1CO60331 668 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 OR5F1O95221 314 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 ABHD16AO95870 558 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 IFNA14P01570 189 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 IFI30P13284 250 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 GSTM3P21266 225 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 OR1E2P47887 323 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 MMP15P51511 669 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 FOXL1Q12952 345 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 LRRC23Q53EV4 343 aaPredicted RBP12.59□□□□□ -0.39
CTSA-216ENST00000607212 MTX3Q5HYI7 312 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 BEND6Q5SZJ8 279 aaPredicted RBP12.59□□□□□ -0.39
CTSA-216ENST00000607212 ARMC4Q5T2S8 1044 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 MBNL2Q5VZF2 373 aaKnown RBP12.59□□□□□ -0.39
CTSA-216ENST00000607212 ZNF774Q6NX45 483 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 ZER1Q7Z7L7 766 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 IGFN1Q86VF2 1251 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 C1orf174Q8IYL3 243 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 MICU2Q8IYU8 434 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 KLHL36Q8N4N3 616 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 SPICQ8N5J4 248 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 NABP1Q96AH0 204 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 TPD52L3Q96J77 140 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 C4orf45Q96LM5 186 aa12.59□□□□□ -0.39
CTSA-216ENST00000607212 SH3GL1Q99961 368 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms