RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 LUZP2Q86TE4 346 aa10.58□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 BPHLQ86WA6 291 aaPredicted RBP10.58□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 NFAM1Q8NET5 270 aaPredicted RBP10.58□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 ASB5Q8WWX0 329 aa10.58□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 MNTQ99583 582 aa10.58□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 ACTR6Q9GZN1 396 aa10.58□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 IRF2BPLQ9H1B7 796 aa10.58□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 RANBP3Q9H6Z4 567 aaPredicted RBP10.58□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 AKAP7Q9P0M2 348 aaPredicted RBP10.58□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 MEIKINA0A087WXM9 373 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 OR6C76A6NM76 312 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 K7ESF4 209 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 EFNA2O43921 213 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 EIF1AXP47813 144 aaKnown RBP10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 CXCL12P48061 93 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 RIDAP52758 137 aaKnown RBP10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 SLC26A5P58743 744 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 AP3S2P59780 193 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 FOXF1Q12946 379 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 LGALSLQ3ZCW2 172 aaPredicted RBP10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 DCXRQ7Z4W1 244 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 CARFQ8N187 725 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 ZNF248Q8NDW4 579 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 OR52B4Q8NGK2 314 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 DVL3Q92997 716 aaPredicted RBP10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 FAM3DQ96BQ1 224 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 ZMAT3Q9HA38 289 aaKnown RBP10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 CA10Q9NS85 328 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 TAS2R4Q9NYW5 299 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 ETV7Q9Y603 341 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 PHYHO14832 338 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 XRCC3O43542 346 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 OR2T1O43869 369 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 SCRG1O75711 98 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 ZNF432O94892 652 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 DNASE1P24855 282 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 RAG2P55895 527 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 TMEM225Q6GV28 225 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 OR10K2Q6IF99 312 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 TMEM71Q6P5X7 295 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 TMEM205Q6UW68 189 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 NLRC3Q7RTR2 1065 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 OR1J4Q8NGS1 313 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 OR8S1Q8NH09 359 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 TRAF4Q9BUZ4 470 aaPredicted RBP10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 CENPMQ9NSP4 180 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 MRPL39Q9NYK5 338 aaKnown RBP10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 KLRF1Q9NZS2 232 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 EIF3KQ9UBQ5 218 aaKnown RBP10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 ZNF69Q9UC07 566 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 DHDHQ9UQ10 334 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 EML6Q6ZMW3 1958 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 GGT3PA6NGU5 568 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 G3V3Q6 166 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 TPD52L2O43399 206 aaKnown RBP10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 SULT1B1O43704 296 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 ALOX12BO75342 701 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 DHPSP49366 369 aaPredicted RBP10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 CCL7P80098 99 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 ROM1Q03395 351 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 TLE3Q04726 772 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 SPOCK1Q08629 439 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 C17orf67Q0P5P2 114 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 SNTA1Q13424 505 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 GLYATL3Q5SZD4 288 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 ANKRD16Q6P6B7 361 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 KCTD18Q6PI47 426 aaPredicted RBP10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 FGD2Q7Z6J4 655 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 STK35Q8TDR2 534 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 ASB17Q8WXJ9 295 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 C5orf34Q96MH7 638 aa10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 ZNF436Q9C0F3 470 aaPredicted RBP10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 ELF5Q9UKW6 265 aaPredicted RBP10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 CDV3Q9UKY7 258 aaKnown RBP10.57□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 CPAMD8Q8IZJ3 1885 aa10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 NPIPA5E9PKD4 350 aa10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 PYCARD-AS1I3L0S3 204 aa10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 RBBP9O75884 186 aa10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 ZNF81P51508 661 aa10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 UBE2MP61081 183 aaKnown RBP10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 WDR45BQ5MNZ6 344 aa10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 KMT5CQ86Y97 462 aa10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 SLC26A10Q8NG04 563 aa10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 OR10G3Q8NGC4 313 aa10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 OR2I1PQ8NGU4 316 aa10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 OR52N5Q8NH56 324 aa10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 TMEM234Q8WY98 164 aa10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 WDR77Q9BQA1 342 aaPredicted RBP10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 WNT16Q9UBV4 365 aa10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 NPIPA1Q9UND3 350 aa10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 MRPS18BQ9Y676 258 aaKnown RBP10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 COL5A1P20908 1838 aaPredicted RBP10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 TMEM272A0A1B0GTI8 110 aa10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 ICMTO60725 284 aa10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 OR2J2O76002 312 aa10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 BLVRAP53004 296 aa10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 EMP2P54851 167 aa10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 PER3P56645 1201 aa10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 GNG2P59768 71 aa10.56□□□□□ -0.72
HMGN3-AS1-201ENST00000604516 OC90Q02509 493 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms