RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 HOXA5P20719 270 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 EPHA2P29317 976 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 TGFBR1P36897 503 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 MNDAP41218 407 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 TNFRSF4P43489 277 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 CDX1P47902 265 aaPredicted RBP4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 NPBWR2P48146 333 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 ASCL1P50553 236 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 DNAJB13P59910 316 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 MAXP61244 160 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 OC90Q02509 493 aaPredicted RBP4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 PIGFQ07326 219 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 DLX2Q07687 328 aaPredicted RBP4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 RBBP4Q09028 425 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 PLA2G7Q13093 441 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 VGLL4Q14135 290 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 FCN2Q15485 313 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 ISXQ2M1V0 245 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 PLEKHN1Q494U1 663 aaPredicted RBP4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 OR4F3Q6IEY1 312 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 PLXDC2Q6UX71 529 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 RPTNQ6XPR3 784 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 IL17RELQ6ZVW7 336 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 SPRED2Q7Z698 418 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 UBAC2Q8NBM4 344 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 OR5B17Q8NGF7 314 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 OR52N4Q8NGI2 321 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 LYPD6BQ8NI32 183 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 LCN9Q8WX39 176 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 UPRTQ96BW1 309 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 PELI1Q96FA3 418 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 ALKBH3Q96Q83 286 aaPredicted RBP4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 DDA1Q9BW61 102 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 AMBRA1Q9C0C7 1298 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 FKRPQ9H9S5 495 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 ACOT13Q9NPJ3 140 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 MRPL17Q9NRX2 175 aaKnown RBP4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 GAR1Q9NY12 217 aaKnown RBP4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 CALML5Q9NZT1 146 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 SAE1Q9UBE0 346 aaPredicted RBP4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 RNF6Q9Y252 685 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 B3GALT5Q9Y2C3 310 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 WDR81Q562E7 1941 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 TMEM218A2RU14 115 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 HYKKA2RU49 373 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 MEGF11A6BM72 1044 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 MBD3L5A6NJ08 208 aaPredicted RBP4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 TMEM200CA6NKL6 621 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 GOSR2O14653 212 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 IFNA21P01568 189 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 ALDOBP05062 364 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 UCNP55089 124 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 SLC35A2P78381 396 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 SLC10A2Q12908 348 aaPredicted RBP4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 FOXE3Q13461 319 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 RAB31Q13636 194 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 GLYR1Q49A26 553 aaPredicted RBP4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 SCGB2B2Q4G0G5 96 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 C6orf226Q5I0X4 101 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 LCN8Q6JVE9 175 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 NIPAL3Q6P499 406 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 DLK2Q6UY11 383 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 PIGZQ86VD9 579 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 IFNEQ86WN2 208 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 TMEM217Q8N7C4 229 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 NAT16Q8N8M0 369 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 ST6GALNAC3Q8NDV1 305 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 OR10W1Q8NGF6 305 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 OR52L2PQ8NGH6 319 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 MBD3L2Q8NHZ7 208 aaPredicted RBP4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 COQ8AQ8NI60 647 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 SUSD6Q92537 303 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 SCRN2Q96FV2 425 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 HPDLQ96IR7 371 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 RASL10BQ96S79 203 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 ZNF382Q96SR6 550 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 FEVQ99581 238 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 SEPT5Q99719 369 aaPredicted RBP4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 FOXB1Q99853 325 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 ASPNQ9BXN1 380 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 SNHG12Q9BXW3 62 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 SPHK2Q9NRA0 654 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 GPR173Q9NS66 373 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 SEMA4GQ9NTN9 838 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 SERTAD3Q9UJW9 196 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 OR52A1Q9UKL2 312 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 ZNF490Q9ULM2 529 aaPredicted RBP4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 PADI3Q9ULW8 664 aa4.51□□□□□ -1.69
SPTBN1-206ENST00000602898 A0A1W2PPK0 400 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 TCRBV9S1A1TA0A576 114 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 LRIT2A6NDA9 550 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 INMT-MINDY4F8WBC2 141 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 H3BS24 57 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 MSH4O15457 936 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 TCF21O43680 179 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 TSPAN13O95857 204 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 C8GP07360 202 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 SP9P0CG40 484 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 GABRA1P14867 456 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms