RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 BCL2L11O43521 198 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 HIST1H1TP22492 207 aaPredicted RBP8.03□□□□□ -1.12
CSMD1-216ENST00000602557 RUNX3Q13761 415 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 VWA1Q6PCB0 445 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 C19orf35Q6ZS72 473 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 TP53I13Q8NBR0 393 aaPredicted RBP8.03□□□□□ -1.12
CSMD1-216ENST00000602557 HSD17B8Q92506 261 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 OR52D1Q9H346 318 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 ELOVL3Q9HB03 270 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 MSL2Q9HCI7 577 aa8.03□□□□□ -1.12
CSMD1-216ENST00000602557 TMEM269A0A1B0GVZ9 245 aa8.02□□□□□ -1.12
CSMD1-216ENST00000602557 TUBAL3A6NHL2 446 aa8.02□□□□□ -1.12
CSMD1-216ENST00000602557 BET1O15155 118 aa8.02□□□□□ -1.12
CSMD1-216ENST00000602557 SSSCA1O60232 199 aa8.02□□□□□ -1.12
CSMD1-216ENST00000602557 C1orf105O95561 183 aa8.02□□□□□ -1.12
CSMD1-216ENST00000602557 PVRP15151 417 aa8.02□□□□□ -1.12
CSMD1-216ENST00000602557 AADACP22760 399 aa8.02□□□□□ -1.12
CSMD1-216ENST00000602557 CTSCP53634 463 aa8.02□□□□□ -1.12
CSMD1-216ENST00000602557 DEFB133Q30KQ1 61 aa8.02□□□□□ -1.12
CSMD1-216ENST00000602557 IL34Q6ZMJ4 242 aa8.02□□□□□ -1.12
CSMD1-216ENST00000602557 MRPL10Q7Z7H8 261 aaKnown RBP8.02□□□□□ -1.12
CSMD1-216ENST00000602557 ADGRG3Q86Y34 549 aa8.02□□□□□ -1.12
CSMD1-216ENST00000602557 SMIM14Q96QK8 99 aa8.02□□□□□ -1.12
CSMD1-216ENST00000602557 IL23AQ9NPF7 189 aa8.02□□□□□ -1.12
CSMD1-216ENST00000602557 LOC102725191A0A1B0GVB3 256 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 AOAHP28039 575 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 MRPL2Q5T653 305 aaKnown RBP8.02□□□□□ -1.13
CSMD1-216ENST00000602557 SLC35D2Q76EJ3 337 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 TMEM37Q8WXS4 190 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 IL22RA2Q969J5 263 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 VN1R3Q9BXE9 311 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 OBP2BQ9NPH6 170 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 PCDHGA1Q9Y5H4 931 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 PLCH1Q4KWH8 1693 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 RAB1AP62820 205 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 DTD2Q96FN9 168 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 ARV1Q9H2C2 271 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 RAB9BQ9NP90 201 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 ZNF331Q9NQX6 463 aaPredicted RBP8.02□□□□□ -1.13
CSMD1-216ENST00000602557 A3GALT2U3KPV4 340 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 TRBV11-1A0A0K0K1C0 115 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 LRP3O75074 770 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 FCGR2CP31995 323 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 C9orf135Q5VTT2 229 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 AIFM1O95831 613 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 MPEG1Q2M385 716 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 NIPSNAP1Q9BPW8 284 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 CPPED1Q9BRF8 314 aaPredicted RBP8.02□□□□□ -1.13
CSMD1-216ENST00000602557 RIF1Q5UIP0 2472 aaKnown RBP8.02□□□□□ -1.13
CSMD1-216ENST00000602557 NRXN3Q9Y4C0 1643 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 M0QZQ0 153 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 ZNF207O43670 478 aaKnown RBP8.02□□□□□ -1.13
CSMD1-216ENST00000602557 ABOP16442 354 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 TGM1P22735 817 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 ISYNA1Q9NPH2 558 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 CUTCQ9NTM9 273 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 A0A1B0GV90 55 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 TRDV1A0A1B0GX56 115 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 MED19A0JLT2 244 aaPredicted RBP8.02□□□□□ -1.13
CSMD1-216ENST00000602557 ACOT7LQ6ZUV0 252 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 SCD5Q86SK9 330 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 OR2D3Q8NGH3 330 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 OR5L1Q8NGL2 311 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 HHLA2Q9UM44 414 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 ZNF727A8MUV8 499 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 EFNA3P52797 238 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 GPR18Q14330 331 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 LCN15Q6UWW0 184 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 ZNF534Q76KX8 674 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 SLC16A6O15403 523 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 OPRD1P41143 372 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 KIR2DS3Q14952 304 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 CNN3Q15417 329 aaKnown RBP8.02□□□□□ -1.13
CSMD1-216ENST00000602557 OR2W3Q7Z3T1 314 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 DUSP22Q9NRW4 184 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 POMT2Q9UKY4 750 aa8.02□□□□□ -1.13
CSMD1-216ENST00000602557 C2orf72A6NCS6 295 aa8.01□□□□□ -1.13
CSMD1-216ENST00000602557 GDF1P27539 372 aa8.01□□□□□ -1.13
CSMD1-216ENST00000602557 HBG1P69891 147 aa8.01□□□□□ -1.13
CSMD1-216ENST00000602557 HBG2P69892 147 aa8.01□□□□□ -1.13
CSMD1-216ENST00000602557 PDE7AQ13946 482 aa8.01□□□□□ -1.13
CSMD1-216ENST00000602557 SYPL1Q16563 259 aa8.01□□□□□ -1.13
CSMD1-216ENST00000602557 OR2B11Q5JQS5 317 aa8.01□□□□□ -1.13
CSMD1-216ENST00000602557 FAM109BQ6ICB4 259 aaPredicted RBP8.01□□□□□ -1.13
CSMD1-216ENST00000602557 CBLL1Q75N03 491 aa8.01□□□□□ -1.13
CSMD1-216ENST00000602557 OR5D18Q8NGL1 313 aa8.01□□□□□ -1.13
CSMD1-216ENST00000602557 ZNRF4Q8WWF5 429 aa8.01□□□□□ -1.13
CSMD1-216ENST00000602557 WDR89Q96FK6 387 aaPredicted RBP8.01□□□□□ -1.13
CSMD1-216ENST00000602557 GHRLQ9UBU3 117 aa8.01□□□□□ -1.13
CSMD1-216ENST00000602557 GOLT1BQ9Y3E0 138 aa8.01□□□□□ -1.13
CSMD1-216ENST00000602557 DOCK6Q96HP0 2047 aa8.01□□□□□ -1.13
CSMD1-216ENST00000602557 PHF1O43189 567 aaPredicted RBP8.01□□□□□ -1.13
CSMD1-216ENST00000602557 LGI1O95970 557 aa8.01□□□□□ -1.13
CSMD1-216ENST00000602557 MGMTP16455 207 aa8.01□□□□□ -1.13
CSMD1-216ENST00000602557 SLC19A1P41440 591 aa8.01□□□□□ -1.13
CSMD1-216ENST00000602557 RPL22L1Q6P5R6 122 aaKnown RBP8.01□□□□□ -1.13
CSMD1-216ENST00000602557 DHRS4L2Q6PKH6 230 aa8.01□□□□□ -1.13
CSMD1-216ENST00000602557 LANCL3Q6ZV70 420 aa8.01□□□□□ -1.13
CSMD1-216ENST00000602557 RDH10Q8IZV5 341 aa8.01□□□□□ -1.13
CSMD1-216ENST00000602557 C11orf42Q8N5U0 333 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms