RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 NPIPB13A6NJU9 1138 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 NPIPB4C9JG80 1138 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 FXYD1O00168 92 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 PIP5K1CO60331 668 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 IGHV1-46P01743 117 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 IGHV2-5P01817 119 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 THRBP10828 461 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 GDI2P50395 445 aaKnown RBP11.18□□□□□ -0.62
RPS28-204ENST00000602140 MMP15P51511 669 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 TOP3AQ13472 1001 aaPredicted RBP11.18□□□□□ -0.62
RPS28-204ENST00000602140 ALG10Q5BKT4 473 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 FAM209AQ5JX71 171 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 SLC25A47Q6Q0C1 308 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 ZNF771Q7L3S4 317 aaPredicted RBP11.18□□□□□ -0.62
RPS28-204ENST00000602140 CLDN22Q8N7P3 220 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 OR4M2Q8NGB6 313 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 SLC25A40Q8TBP6 338 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 IPCEF1Q8WWN9 437 aaPredicted RBP11.18□□□□□ -0.62
RPS28-204ENST00000602140 CCL17Q92583 94 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 RAB1CQ92928 201 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 TIMD4Q96H15 378 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 ZNF583Q96ND8 569 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 SIKE1Q9BRV8 207 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 TMPRSS13Q9BYE2 586 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 PLA2G12AQ9BZM1 189 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 OR2J1Q9GZK6 312 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 TXNIPQ9H3M7 391 aa11.18□□□□□ -0.62
RPS28-204ENST00000602140 GMNCA6NCL1 334 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 ZSCAN5BA6NJL1 495 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 IFNA14P01570 189 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 NR2C1P13056 603 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 ADRA2CP18825 462 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 LAP3P28838 519 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 HILS1P60008 231 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 RPL27P61353 136 aaKnown RBP11.17□□□□□ -0.62
RPS28-204ENST00000602140 PPP1CBP62140 327 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 TAF11Q15544 211 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 LRRC23Q53EV4 343 aaPredicted RBP11.17□□□□□ -0.62
RPS28-204ENST00000602140 CYBRD1Q53TN4 286 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 FAM27BQ5VT28 67 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 DCAF12L2Q5VW00 463 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 MBNL2Q5VZF2 373 aaKnown RBP11.17□□□□□ -0.62
RPS28-204ENST00000602140 ERICH5Q6P6B1 374 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 UNQ6126/PRO20091Q6UXV3 157 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 USP43Q70EL4 1123 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 PEG10Q86TG7 708 aaKnown RBP11.17□□□□□ -0.62
RPS28-204ENST00000602140 IGFN1Q86VF2 1251 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 ALDH16A1Q8IZ83 802 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 ABHD4Q8TB40 342 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 KLF14Q8TD94 323 aaPredicted RBP11.17□□□□□ -0.62
RPS28-204ENST00000602140 C10orf82Q8WW14 230 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 BPIFA2Q96DR5 249 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 TPD52L3Q96J77 140 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 RBP7Q96R05 134 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 GAL3ST1Q99999 423 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 ALG12Q9BV10 488 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 TMEM120AQ9BXJ8 343 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 OR2H1Q9GZK4 316 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 WNT5BQ9H1J7 359 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 HIF3AQ9Y2N7 669 aa11.17□□□□□ -0.62
RPS28-204ENST00000602140 ISPDA4D126 451 aa11.16□□□□□ -0.62
RPS28-204ENST00000602140 TRIM77I1YAP6 450 aa11.16□□□□□ -0.62
RPS28-204ENST00000602140 J3QLI3 93 aa11.16□□□□□ -0.62
RPS28-204ENST00000602140 MRASO14807 208 aa11.16□□□□□ -0.62
RPS28-204ENST00000602140 UBOX5O94941 541 aa11.16□□□□□ -0.62
RPS28-204ENST00000602140 NGFP01138 241 aa11.16□□□□□ -0.62
RPS28-204ENST00000602140 NPPAP01160 153 aa11.16□□□□□ -0.62
RPS28-204ENST00000602140 IFI30P13284 250 aa11.16□□□□□ -0.62
RPS28-204ENST00000602140 KDELR2P33947 212 aa11.16□□□□□ -0.62
RPS28-204ENST00000602140 GUCA1AP43080 201 aaPredicted RBP11.16□□□□□ -0.62
RPS28-204ENST00000602140 CTXN1P60606 82 aa11.16□□□□□ -0.62
RPS28-204ENST00000602140 ST3GAL3Q11203 375 aa11.16□□□□□ -0.62
RPS28-204ENST00000602140 COQ5Q5HYK3 327 aa11.16□□□□□ -0.62
RPS28-204ENST00000602140 RFPL4BQ6ZWI9 263 aa11.16□□□□□ -0.62
RPS28-204ENST00000602140 C1QL2Q7Z5L3 287 aa11.16□□□□□ -0.62
RPS28-204ENST00000602140 C1orf174Q8IYL3 243 aa11.16□□□□□ -0.62
RPS28-204ENST00000602140 FAM216AQ8WUB2 273 aa11.16□□□□□ -0.62
RPS28-204ENST00000602140 GCDHQ92947 438 aaPredicted RBP11.16□□□□□ -0.62
RPS28-204ENST00000602140 EGLN1Q9GZT9 426 aa11.16□□□□□ -0.62
RPS28-204ENST00000602140 A4GNTQ9UNA3 340 aa11.16□□□□□ -0.62
RPS28-204ENST00000602140 TIMM10BQ9Y5J6 103 aa11.16□□□□□ -0.62
RPS28-204ENST00000602140 A0A1W2PPL8 197 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 TMEM89A2RUT3 159 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 IGHMP01871 453 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 CST2P09228 141 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 FUT4P22083 530 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 LIPAP38571 399 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 COMPP49747 757 aaPredicted RBP11.15□□□□□ -0.62
RPS28-204ENST00000602140 ARFIP2P53365 341 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 PCBD1P61457 104 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 SLC3A1Q07837 685 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 SF3A3Q12874 501 aaKnown RBP eCLIP11.15□□□□□ -0.62
RPS28-204ENST00000602140 KLF10Q13118 480 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 HNRNPA0Q13151 305 aaKnown RBP11.15□□□□□ -0.62
RPS28-204ENST00000602140 SPRNQ5BIV9 151 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 ZNF774Q6NX45 483 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 HDXQ7Z353 690 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 MICU2Q8IYU8 434 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 C3orf56Q8N813 242 aa11.15□□□□□ -0.62
RPS28-204ENST00000602140 LRRC75AQ8NAA5 344 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms