RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 CACNG6Q9BXT2 260 aa14.58□□□□□ -0.08
TRIM28-215ENST00000601150 DGCR6LQ9BY27 220 aa14.58□□□□□ -0.08
TRIM28-215ENST00000601150 RERGLQ9H628 205 aa14.58□□□□□ -0.08
TRIM28-215ENST00000601150 EGLN3Q9H6Z9 239 aa14.58□□□□□ -0.08
TRIM28-215ENST00000601150 C12orf71A8MTZ7 269 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 SLC16A7O60669 478 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 FKBP6O75344 327 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 KHDRBS3O75525 346 aaKnown RBP14.57□□□□□ -0.08
TRIM28-215ENST00000601150 OR4A8P0C604 315 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 CD99P14209 185 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 ZNF32P17041 273 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 GSTM3P21266 225 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 NR4A1P22736 598 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 NOS3P29474 1203 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 THBS4P35443 961 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 ERFP50548 548 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 PCBD1P61457 104 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 CBX1P83916 185 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 GALK2Q01415 458 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 ADIPOQQ15848 244 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 ETFDHQ16134 617 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 MST1LQ2TV78 715 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 KRT80Q6KB66 452 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 DNM1P34Q6PK57 102 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 JAZF1Q86VZ6 243 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 OR10G2Q8NGC3 310 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 OR1J2Q8NGS2 313 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 GIPC3Q8TF64 312 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 SNX18Q96RF0 628 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 TMUB1Q9BVT8 246 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 POLE4Q9NR33 117 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 IL20Q9NYY1 176 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 PMF1-BGLAPU3KQ54 211 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 ARFGEF3Q5TH69 2177 aa14.57□□□□□ -0.08
TRIM28-215ENST00000601150 ARRDC5A6NEK1 342 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 B9A039 149 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 H7C417 338 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 RENP00797 406 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 HIST1H1CP16403 213 aaKnown RBP14.56□□□□□ -0.08
TRIM28-215ENST00000601150 CRABP1P29762 137 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 SNRPD2P62316 118 aaKnown RBP14.56□□□□□ -0.08
TRIM28-215ENST00000601150 ENDOGQ14249 297 aaKnown RBP14.56□□□□□ -0.08
TRIM28-215ENST00000601150 EFNB3Q15768 340 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 SWI5Q1ZZU3 235 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 TBC1D28Q2M2D7 210 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 PABPC1L2AQ5JQF8 200 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 CLEC12AQ5QGZ9 265 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 LEG1Q6P5S2 330 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 SYT9Q86SS6 491 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 GLB1L2Q8IW92 636 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 OR4K13Q8NH42 304 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 SLCO4A1Q96BD0 722 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 NMNAT3Q96T66 252 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 WACQ9BTA9 647 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 ZNF416Q9BWM5 594 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 NUAK2Q9H093 628 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 CDH20Q9HBT6 801 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 BARX1Q9HBU1 254 aaPredicted RBP14.56□□□□□ -0.08
TRIM28-215ENST00000601150 TBC1D23Q9NUY8 699 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 DNAJB9Q9UBS3 223 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 TIMM10BQ9Y5J6 103 aa14.56□□□□□ -0.08
TRIM28-215ENST00000601150 E2F6O75461 281 aa14.55□□□□□ -0.08
TRIM28-215ENST00000601150 IGHV4-39P01824 125 aa14.55□□□□□ -0.08
TRIM28-215ENST00000601150 SCG5P05408 212 aa14.55□□□□□ -0.08
TRIM28-215ENST00000601150 APEX1P27695 318 aaKnown RBP14.55□□□□□ -0.08
TRIM28-215ENST00000601150 APLNRP35414 380 aa14.55□□□□□ -0.08
TRIM28-215ENST00000601150 GLRXP35754 106 aa14.55□□□□□ -0.08
TRIM28-215ENST00000601150 PSG4Q00888 419 aa14.55□□□□□ -0.08
TRIM28-215ENST00000601150 C1orf146Q5VVC0 180 aa14.55□□□□□ -0.08
TRIM28-215ENST00000601150 UGT2A3Q6UWM9 527 aa14.55□□□□□ -0.08
TRIM28-215ENST00000601150 CD300LDQ6UXZ3 194 aa14.55□□□□□ -0.08
TRIM28-215ENST00000601150 CCDC121Q6ZUS5 278 aa14.55□□□□□ -0.08
TRIM28-215ENST00000601150 CPEB3Q8NE35 698 aaKnown RBP14.55□□□□□ -0.08
TRIM28-215ENST00000601150 OR8D4Q8NGM9 314 aa14.55□□□□□ -0.08
TRIM28-215ENST00000601150 Q96MF0 132 aa14.55□□□□□ -0.08
TRIM28-215ENST00000601150 FOXN4Q96NZ1 517 aa14.55□□□□□ -0.08
TRIM28-215ENST00000601150 FEVQ99581 238 aa14.55□□□□□ -0.08
TRIM28-215ENST00000601150 PLA2G12AQ9BZM1 189 aa14.55□□□□□ -0.08
TRIM28-215ENST00000601150 OR2H1Q9GZK4 316 aa14.55□□□□□ -0.08
TRIM28-215ENST00000601150 EMC7Q9NPA0 242 aa14.55□□□□□ -0.08
TRIM28-215ENST00000601150 GDF2Q9UK05 429 aaPredicted RBP14.55□□□□□ -0.08
TRIM28-215ENST00000601150 COA3Q9Y2R0 106 aaPredicted RBP14.55□□□□□ -0.08
TRIM28-215ENST00000601150 CMAHPQ9Y471 501 aa14.55□□□□□ -0.08
TRIM28-215ENST00000601150 FLNAP21333 2647 aaKnown RBP14.55□□□□□ -0.08
TRIM28-215ENST00000601150 BHLHE40O14503 412 aa14.54□□□□□ -0.08
TRIM28-215ENST00000601150 NDUFS7O75251 213 aa14.54□□□□□ -0.08
TRIM28-215ENST00000601150 SNAP29O95721 258 aa14.54□□□□□ -0.08
TRIM28-215ENST00000601150 CCL2P13500 99 aa14.54□□□□□ -0.08
TRIM28-215ENST00000601150 STOMP27105 288 aa14.54□□□□□ -0.08
TRIM28-215ENST00000601150 RPS23P62266 143 aaKnown RBP14.54□□□□□ -0.08
TRIM28-215ENST00000601150 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.54□□□□□ -0.08
TRIM28-215ENST00000601150 COX10Q12887 443 aa14.54□□□□□ -0.08
TRIM28-215ENST00000601150 RAB35Q15286 201 aa14.54□□□□□ -0.08
TRIM28-215ENST00000601150 SLC35F1Q5T1Q4 408 aa14.54□□□□□ -0.08
TRIM28-215ENST00000601150 TMEM179BQ7Z7N9 219 aa14.54□□□□□ -0.08
TRIM28-215ENST00000601150 ALDH16A1Q8IZ83 802 aa14.54□□□□□ -0.08
TRIM28-215ENST00000601150 PAQR4Q8N4S7 273 aaPredicted RBP14.54□□□□□ -0.08
TRIM28-215ENST00000601150 SDR9C7Q8NEX9 313 aa14.54□□□□□ -0.08
TRIM28-215ENST00000601150 OR52E2Q8NGJ4 325 aa14.54□□□□□ -0.08
TRIM28-215ENST00000601150 AKR7LQ8NHP1 331 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms