RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 MICAQ29983 383 aa13.59□□□□□ -0.23
RPS28-203ENST00000600659 SLC36A2Q495M3 483 aa13.59□□□□□ -0.23
RPS28-203ENST00000600659 PABPC1L2AQ5JQF8 200 aa13.59□□□□□ -0.23
RPS28-203ENST00000600659 VHLLQ6RSH7 139 aa13.59□□□□□ -0.23
RPS28-203ENST00000600659 ADCK1Q86TW2 530 aa13.59□□□□□ -0.23
RPS28-203ENST00000600659 PAPD5Q8NDF8 572 aaKnown RBP13.59□□□□□ -0.23
RPS28-203ENST00000600659 FOXN4Q96NZ1 517 aa13.59□□□□□ -0.23
RPS28-203ENST00000600659 DDOQ99489 341 aa13.59□□□□□ -0.23
RPS28-203ENST00000600659 DGCR6LQ9BY27 220 aa13.59□□□□□ -0.23
RPS28-203ENST00000600659 NUAK2Q9H093 628 aa13.59□□□□□ -0.23
RPS28-203ENST00000600659 PLK3Q9H4B4 646 aa13.59□□□□□ -0.23
RPS28-203ENST00000600659 IL20Q9NYY1 176 aa13.59□□□□□ -0.23
RPS28-203ENST00000600659 FBXL3Q9UKT7 428 aa13.59□□□□□ -0.23
RPS28-203ENST00000600659 CDH10Q9Y6N8 788 aa13.59□□□□□ -0.23
RPS28-203ENST00000600659 YLPM1P49750 1951 aaKnown RBP13.59□□□□□ -0.23
RPS28-203ENST00000600659 IGLV1-36A0A0B4J1U3 117 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 BHLHE40O14503 412 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 ENTPD5O75356 428 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 CST2P09228 141 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 CCL2P13500 99 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 HIST1H1CP16403 213 aaKnown RBP13.58□□□□□ -0.24
RPS28-203ENST00000600659 IFNGR2P38484 337 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 ERFP50548 548 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 RPS6KA3P51812 740 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 PSG4Q00888 419 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 DAG1Q14118 895 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 SGCAQ16586 387 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 OTPQ5XKR4 325 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 TMEM53Q6P2H8 277 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 CSPG4Q6UVK1 2322 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 RASSF6Q6ZTQ3 369 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 LINC00471Q8N535 108 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 AQP11Q8NBQ7 271 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 SLC30A7Q8NEW0 376 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 TRMT61AQ96FX7 289 aaKnown RBP13.58□□□□□ -0.24
RPS28-203ENST00000600659 COX4I2Q96KJ9 171 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 TSSK2Q96PF2 358 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 ERMAPQ96PL5 475 aaPredicted RBP13.58□□□□□ -0.24
RPS28-203ENST00000600659 ZNF416Q9BWM5 594 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 NDEL1Q9GZM8 345 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 WNT5BQ9H1J7 359 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 REEP1Q9H902 201 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 TLN2Q9Y4G6 2542 aa13.58□□□□□ -0.24
RPS28-203ENST00000600659 LOC100509620A0A075B734 347 aa13.57□□□□□ -0.24
RPS28-203ENST00000600659 A0A1W2PPL8 197 aa13.57□□□□□ -0.24
RPS28-203ENST00000600659 XKRYO14609 159 aa13.57□□□□□ -0.24
RPS28-203ENST00000600659 SNAP29O95721 258 aa13.57□□□□□ -0.24
RPS28-203ENST00000600659 GAAP10253 952 aa13.57□□□□□ -0.24
RPS28-203ENST00000600659 MSR1P21757 451 aa13.57□□□□□ -0.24
RPS28-203ENST00000600659 APEX1P27695 318 aaKnown RBP13.57□□□□□ -0.24
RPS28-203ENST00000600659 SERPINF1P36955 418 aa13.57□□□□□ -0.24
RPS28-203ENST00000600659 ZNF362Q5T0B9 420 aaPredicted RBP13.57□□□□□ -0.24
RPS28-203ENST00000600659 SPATA24Q86W54 205 aa13.57□□□□□ -0.24
RPS28-203ENST00000600659 SNX18Q96RF0 628 aa13.57□□□□□ -0.24
RPS28-203ENST00000600659 NMNAT3Q96T66 252 aa13.57□□□□□ -0.24
RPS28-203ENST00000600659 DOK1Q99704 481 aa13.57□□□□□ -0.24
RPS28-203ENST00000600659 NIPSNAP1Q9BPW8 284 aa13.57□□□□□ -0.24
RPS28-203ENST00000600659 LRMDAQ9H2I8 198 aa13.57□□□□□ -0.24
RPS28-203ENST00000600659 RNF121Q9H920 327 aa13.57□□□□□ -0.24
RPS28-203ENST00000600659 EMC7Q9NPA0 242 aa13.57□□□□□ -0.24
RPS28-203ENST00000600659 ARRDC5A6NEK1 342 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 B9A039 149 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 SLC16A7O60669 478 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 FKBP6O75344 327 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 MPZL1O95297 269 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 GPANK1O95872 356 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 CST1P01037 141 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 GLRXP35754 106 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 WNT5AP41221 380 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 GK3PQ14409 553 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 CLEC12BQ2HXU8 276 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 OR6V1Q8N148 313 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 NPEPL1Q8NDH3 523 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 SDR9C7Q8NEX9 313 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 OR10G2Q8NGC3 310 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 OR4Q3Q8NH05 313 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 OR4K13Q8NH42 304 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 AKR7LQ8NHP1 331 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 UTP4Q969X6 686 aaKnown RBP13.56□□□□□ -0.24
RPS28-203ENST00000600659 MRPL24Q96A35 216 aaKnown RBP13.56□□□□□ -0.24
RPS28-203ENST00000600659 POM121L2Q96KW2 1035 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 SORCS2Q96PQ0 1159 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 IFT27Q9BW83 186 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 MRPL37Q9BZE1 423 aaKnown RBP13.56□□□□□ -0.24
RPS28-203ENST00000600659 OR2H1Q9GZK4 316 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 NTN4Q9HB63 628 aa13.56□□□□□ -0.24
RPS28-203ENST00000600659 MYEF2Q9P2K5 600 aaKnown RBP13.56□□□□□ -0.24
RPS28-203ENST00000600659 COA3Q9Y2R0 106 aaPredicted RBP13.56□□□□□ -0.24
RPS28-203ENST00000600659 A0A096LNT2 108 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 OR6C68A6NDL8 312 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 H7C1Q1 480 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 KHDRBS3O75525 346 aaKnown RBP13.55□□□□□ -0.24
RPS28-203ENST00000600659 ATP5HO75947 161 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 LY6HO94772 140 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 SOX14O95416 240 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 STAMBPO95630 424 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 FOSL1P15407 271 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 ERVS71-1P61550 626 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 TNK1Q13470 666 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 KCNMB1Q16558 191 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms