RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 GABPB1Q06547 395 aaPredicted RBP7.57□□□□□ -1.2
SSBP4-208ENST00000600628 PIGFQ07326 219 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 TNK1Q13470 666 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 KRR1Q13601 381 aaKnown RBP7.57□□□□□ -1.2
SSBP4-208ENST00000600628 RAB39AQ14964 217 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 MICAQ29983 383 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 CLEC12BQ2HXU8 276 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 DNAL1Q4LDG9 190 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 HIST2H3PS2Q5TEC6 136 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 OR2T5Q6IEZ7 315 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 HIST2H3AQ71DI3 136 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 RRM2BQ7LG56 351 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 ZBTB46Q86UZ6 589 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 OR2T29Q8NH02 315 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 CANT1Q8WVQ1 401 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 MCUR1Q96AQ8 359 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 SLCO4A1Q96BD0 722 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 RASD2Q96D21 266 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 POM121L2Q96KW2 1035 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 THTPAQ9BU02 230 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 ZNF416Q9BWM5 594 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 OR52D1Q9H346 318 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 C1orf198Q9H425 327 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 POLE4Q9NR33 117 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 FBXO9Q9UK97 447 aaPredicted RBP7.57□□□□□ -1.2
SSBP4-208ENST00000600628 POMPQ9Y244 141 aa7.57□□□□□ -1.2
SSBP4-208ENST00000600628 VWC2LB2RUY7 222 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 H7C1C5 153 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 SMAD7O15105 426 aaKnown RBP7.56□□□□□ -1.2
SSBP4-208ENST00000600628 GYG2O15488 501 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 GPRIN2O60269 458 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 OR10H3O60404 316 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 DNAJC8O75937 253 aaPredicted RBP7.56□□□□□ -1.2
SSBP4-208ENST00000600628 LY6G6DO95868 133 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 F12P00748 615 aaPredicted RBP7.56□□□□□ -1.2
SSBP4-208ENST00000600628 GASTP01350 101 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 GAAP10253 952 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 COX5BP10606 129 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 BMP4P12644 408 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 ZNF32P17041 273 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 HOXB4P17483 251 aaPredicted RBP7.56□□□□□ -1.2
SSBP4-208ENST00000600628 LAP3P28838 519 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 WNT5AP41221 380 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 LSM6P62312 80 aaKnown RBP7.56□□□□□ -1.2
SSBP4-208ENST00000600628 LCN6P62502 163 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 PSG4Q00888 419 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 CHRNB3Q05901 458 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 CD47Q08722 323 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 TOP3AQ13472 1001 aaPredicted RBP7.56□□□□□ -1.2
SSBP4-208ENST00000600628 DAG1Q14118 895 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 KRTAP27-1Q3LI81 207 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 SLC36A2Q495M3 483 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 FAM98BQ52LJ0 330 aaKnown RBP7.56□□□□□ -1.2
SSBP4-208ENST00000600628 PABPC1L2AQ5JQF8 200 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 TMEM255AQ5JRV8 349 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 CLEC9AQ6UXN8 241 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 RASSF6Q6ZTQ3 369 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 Q71RC1 249 aaPredicted RBP7.56□□□□□ -1.2
SSBP4-208ENST00000600628 SLC16A14Q7RTX9 510 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 TMEM179BQ7Z7N9 219 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 LNX2Q8N448 690 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 NPEPL1Q8NDH3 523 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 SLC30A7Q8NEW0 376 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 OR9Q2Q8NGE9 314 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 OR8D4Q8NGM9 314 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 GNPDA2Q8TDQ7 276 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 MRPL24Q96A35 216 aaKnown RBP7.56□□□□□ -1.2
SSBP4-208ENST00000600628 CCDC124Q96CT7 223 aaKnown RBP7.56□□□□□ -1.2
SSBP4-208ENST00000600628 DUS3LQ96G46 650 aaKnown RBP7.56□□□□□ -1.2
SSBP4-208ENST00000600628 ZNF570Q96NI8 536 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 SORCS2Q96PQ0 1159 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 CHID1Q9BWS9 393 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 PLA2G12AQ9BZM1 189 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 NMNAT2Q9BZQ4 307 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 OR2H1Q9GZK4 316 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 NUAK2Q9H093 628 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 RACGAP1Q9H0H5 632 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 WNT5BQ9H1J7 359 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 NTN4Q9HB63 628 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 BARX1Q9HBU1 254 aaPredicted RBP7.56□□□□□ -1.2
SSBP4-208ENST00000600628 KRCC1Q9NPI7 259 aaPredicted RBP7.56□□□□□ -1.2
SSBP4-208ENST00000600628 GRHPRQ9UBQ7 328 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 IL20RAQ9UHF4 553 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 SLC7A8Q9UHI5 535 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 IER3IP1Q9Y5U9 82 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 MALRD1Q5VYJ5 2156 aa7.56□□□□□ -1.2
SSBP4-208ENST00000600628 JMJD1CQ15652 2540 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 DHRS12A0PJE2 317 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 OR6C68A6NDL8 312 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 OR6C6A6NF89 314 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 TNFRSF11BO00300 401 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 SYNGR3O43761 229 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 RAB36O95755 333 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 PTHP01270 115 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 HEXAP06865 529 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 HIST1H1CP16403 213 aaKnown RBP7.55□□□□□ -1.2
SSBP4-208ENST00000600628 MSR1P21757 451 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 SLC6A6P31641 620 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 RPL4P36578 427 aaKnown RBP7.55□□□□□ -1.2
SSBP4-208ENST00000600628 IFNGR2P38484 337 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms