RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 OR8B4Q96RC9 309 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 COMMD3Q9UBI1 195 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 ZNF281Q9Y2X9 895 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 SMAD9O15198 467 aaKnown RBP13.49□□□□□ -0.25
HIF3A-218ENST00000600383 TMCC2O75069 709 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 SC5DO75845 299 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 WNT11O96014 354 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 MYL9P24844 172 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 LAP3P28838 519 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 AGFG1P52594 562 aaKnown RBP13.49□□□□□ -0.25
HIF3A-218ENST00000600383 CAMK2BQ13554 666 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 SLC17A1Q14916 467 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 SPANXN2Q5MJ10 180 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 LRFN4Q6PJG9 635 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.49□□□□□ -0.25
HIF3A-218ENST00000600383 SYT9Q86SS6 491 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 LAX1Q8IWV1 398 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 RDH10Q8IZV5 341 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 PARP16Q8N5Y8 322 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 MDS2Q8NDY4 140 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 ORAI1Q96D31 301 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 DTNBP1Q96EV8 351 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 CENPMQ9NSP4 180 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 KLHL9Q9P2J3 617 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 KLF13Q9Y2Y9 288 aaPredicted RBP13.49□□□□□ -0.25
HIF3A-218ENST00000600383 CFAP47Q6ZTR5 3102 aa13.49□□□□□ -0.25
HIF3A-218ENST00000600383 NME2P1O60361 137 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 GAAP10253 952 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 NME2P22392 152 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 MTNR1BP49286 362 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 CLDN15P56746 228 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 TMEM251Q8N6I4 163 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 ZNF454Q8N9F8 522 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 FDCSPQ8NFU4 85 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 OR2G2Q8NGZ5 317 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 OR2V1Q8NHB1 315 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 AP3S1Q92572 193 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 ZNF845Q96IR2 970 aaPredicted RBP13.48□□□□□ -0.25
HIF3A-218ENST00000600383 SLC6A15Q9H2J7 730 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 ABCB9Q9NP78 766 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 EMC7Q9NPA0 242 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 CDV3Q9UKY7 258 aaKnown RBP13.48□□□□□ -0.25
HIF3A-218ENST00000600383 IQCMA0A1B0GVH7 501 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 DCDC2BA2VCK2 349 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 OR10A3P58181 314 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 PPIAP62937 165 aaKnown RBP13.48□□□□□ -0.25
HIF3A-218ENST00000600383 CLN3Q13286 438 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 DEFB109BQ30KR1 87 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 IDNKQ5T6J7 187 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 NR2C2APQ86WQ0 139 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 ZNF676Q8N7Q3 588 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 HAS2Q92819 552 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 PPP1R14AQ96A00 147 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 MAP6Q96JE9 813 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 POLR1DQ9Y2S0 133 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 CMAHPQ9Y471 501 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 CSAG2Q9Y5P2 127 aa13.48□□□□□ -0.25
HIF3A-218ENST00000600383 ACOD1A6NK06 481 aa13.47□□□□□ -0.25
HIF3A-218ENST00000600383 GPRIN2O60269 458 aa13.47□□□□□ -0.25
HIF3A-218ENST00000600383 HPNP05981 417 aa13.47□□□□□ -0.25
HIF3A-218ENST00000600383 CSNK1A1P48729 337 aa13.47□□□□□ -0.25
HIF3A-218ENST00000600383 SELENOPP49908 381 aa13.47□□□□□ -0.25
HIF3A-218ENST00000600383 RIDAP52758 137 aaKnown RBP13.47□□□□□ -0.25
HIF3A-218ENST00000600383 PPP5CP53041 499 aa13.47□□□□□ -0.25
HIF3A-218ENST00000600383 SOX8P57073 446 aa13.47□□□□□ -0.25
HIF3A-218ENST00000600383 ZNF45Q02386 682 aa13.47□□□□□ -0.25
HIF3A-218ENST00000600383 RTP5Q14D33 572 aa13.47□□□□□ -0.25
HIF3A-218ENST00000600383 ZNF766Q5HY98 468 aa13.47□□□□□ -0.25
HIF3A-218ENST00000600383 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.47□□□□□ -0.25
HIF3A-218ENST00000600383 PRSS35Q8N3Z0 413 aa13.47□□□□□ -0.25
HIF3A-218ENST00000600383 DRAXINQ8NBI3 349 aaPredicted RBP13.47□□□□□ -0.25
HIF3A-218ENST00000600383 OR52N5Q8NH56 324 aa13.47□□□□□ -0.25
HIF3A-218ENST00000600383 SLC30A2Q9BRI3 323 aa13.47□□□□□ -0.25
HIF3A-218ENST00000600383 RNF32Q9H0A6 362 aa13.47□□□□□ -0.25
HIF3A-218ENST00000600383 GLTPQ9NZD2 209 aa13.47□□□□□ -0.25
HIF3A-218ENST00000600383 DNAJC13O75165 2243 aa13.47□□□□□ -0.25
HIF3A-218ENST00000600383 ZNF407Q9C0G0 2248 aa13.47□□□□□ -0.25
HIF3A-218ENST00000600383 LAMA5O15230 3695 aa13.47□□□□□ -0.25
HIF3A-218ENST00000600383 PNPP00491 289 aa13.46□□□□□ -0.25
HIF3A-218ENST00000600383 HRGP04196 525 aa13.46□□□□□ -0.25
HIF3A-218ENST00000600383 ITGB2P05107 769 aa13.46□□□□□ -0.25
HIF3A-218ENST00000600383 CD1AP06126 327 aa13.46□□□□□ -0.25
HIF3A-218ENST00000600383 SOX2P48431 317 aa13.46□□□□□ -0.25
HIF3A-218ENST00000600383 MRPL28Q13084 256 aaKnown RBP13.46□□□□□ -0.25
HIF3A-218ENST00000600383 MADCAM1Q13477 382 aa13.46□□□□□ -0.25
HIF3A-218ENST00000600383 YIF1BQ5BJH7 314 aa13.46□□□□□ -0.25
HIF3A-218ENST00000600383 SLC25A47Q6Q0C1 308 aa13.46□□□□□ -0.25
HIF3A-218ENST00000600383 PLXDC2Q6UX71 529 aa13.46□□□□□ -0.25
HIF3A-218ENST00000600383 PAMR1Q6UXH9 720 aa13.46□□□□□ -0.25
HIF3A-218ENST00000600383 ZIC4Q8N9L1 334 aa13.46□□□□□ -0.25
HIF3A-218ENST00000600383 RGP1Q92546 391 aaPredicted RBP13.46□□□□□ -0.25
HIF3A-218ENST00000600383 ADGRG7Q96K78 797 aa13.46□□□□□ -0.25
HIF3A-218ENST00000600383 DCBLD2Q96PD2 775 aa13.46□□□□□ -0.25
HIF3A-218ENST00000600383 OR2M2Q96R28 347 aa13.46□□□□□ -0.25
HIF3A-218ENST00000600383 NOX4Q9NPH5 578 aa13.46□□□□□ -0.25
HIF3A-218ENST00000600383 TIGARQ9NQ88 270 aa13.46□□□□□ -0.25
HIF3A-218ENST00000600383 LRP12Q9Y561 859 aa13.46□□□□□ -0.25
HIF3A-218ENST00000600383 AKAP13Q12802 2813 aa13.46□□□□□ -0.25
HIF3A-218ENST00000600383 ZNF879B4DU55 563 aa13.46□□□□□ -0.26
HIF3A-218ENST00000600383 TAF4O00268 1085 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms