RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 B3GLCTQ6Y288 498 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 DMRTC2Q8IXT2 367 aaPredicted RBP17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 ENTHD1Q8IYW4 607 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 LRRC18Q8N456 261 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 ZNF511Q8NB15 262 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 OR8J1Q8NGP2 316 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 PSMG3-AS1Q96PY0 264 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 SIAEQ9HAT2 523 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 COL12A1Q99715 3063 aa17.49■□□□□ 0.39
SHKBP1-222ENST00000600320 ARPC4-TTLL3A0A0A6YYG9 625 aa17.48■□□□□ 0.39
SHKBP1-222ENST00000600320 TUBAL3A6NHL2 446 aa17.48■□□□□ 0.39
SHKBP1-222ENST00000600320 H0YAE9 185 aa17.48■□□□□ 0.39
SHKBP1-222ENST00000600320 GLCEO94923 617 aa17.48■□□□□ 0.39
SHKBP1-222ENST00000600320 HLA-HP01893 362 aa17.48■□□□□ 0.39
SHKBP1-222ENST00000600320 PPP3CBP16298 524 aa17.48■□□□□ 0.39
SHKBP1-222ENST00000600320 HSF2Q03933 536 aa17.48■□□□□ 0.39
SHKBP1-222ENST00000600320 APOFQ13790 326 aa17.48■□□□□ 0.39
SHKBP1-222ENST00000600320 SNCBQ16143 134 aa17.48■□□□□ 0.39
SHKBP1-222ENST00000600320 KCNMB1Q16558 191 aa17.48■□□□□ 0.39
SHKBP1-222ENST00000600320 C6orf52Q5T4I8 152 aa17.48■□□□□ 0.39
SHKBP1-222ENST00000600320 FAM27BQ5VT28 67 aa17.48■□□□□ 0.39
SHKBP1-222ENST00000600320 ZNF691Q5VV52 312 aa17.48■□□□□ 0.39
SHKBP1-222ENST00000600320 MEX3BQ6ZN04 569 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-222ENST00000600320 WFDC8Q8IUA0 241 aa17.48■□□□□ 0.39
SHKBP1-222ENST00000600320 DEPDC4Q8N2C3 294 aa17.48■□□□□ 0.39
SHKBP1-222ENST00000600320 OR6K6Q8NGW6 343 aa17.48■□□□□ 0.39
SHKBP1-222ENST00000600320 TFAP2CQ92754 450 aa17.48■□□□□ 0.39
SHKBP1-222ENST00000600320 RASSF1Q9NS23 344 aa17.48■□□□□ 0.39
SHKBP1-222ENST00000600320 DNAJC27Q9NZQ0 273 aa17.48■□□□□ 0.39
SHKBP1-222ENST00000600320 AMDHD2Q9Y303 409 aa17.48■□□□□ 0.39
SHKBP1-222ENST00000600320 FARS2O95363 451 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 GNAO1P09471 354 aa17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 PSKH1P11801 424 aa17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 HOXB1P14653 301 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 UBE2NP61088 152 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 SNRPGP62308 76 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 TEKQ02763 1124 aa17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 GLO1Q04760 184 aa17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 NXNL2Q5VZ03 156 aa17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 ALKBH2Q6NS38 261 aa17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 SLC16A14Q7RTX9 510 aa17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 P2RY8Q86VZ1 359 aa17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 APH1BQ8WW43 257 aa17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 TRUB1Q8WWH5 349 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 ZMYND19Q96E35 227 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 FBXO17Q96EF6 278 aa17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 ZNF582Q96NG8 517 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 USB1Q9BQ65 265 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 MED18Q9BUE0 208 aa17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 ZNF416Q9BWM5 594 aa17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 C1QTNF6Q9BXI9 259 aa17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 B3GNT2Q9NY97 397 aa17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 NPAP1Q9NZP6 1156 aa17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 CRIM1Q9NZV1 1036 aa17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 MOKQ9UQ07 419 aa17.47■□□□□ 0.39
SHKBP1-222ENST00000600320 PRODHO43272 600 aa17.46■□□□□ 0.39
SHKBP1-222ENST00000600320 HLA-DQA2P01906 255 aa17.46■□□□□ 0.39
SHKBP1-222ENST00000600320 MMP7P09237 267 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-222ENST00000600320 COL8A1P27658 744 aa17.46■□□□□ 0.39
SHKBP1-222ENST00000600320 GSTT1P30711 240 aa17.46■□□□□ 0.39
SHKBP1-222ENST00000600320 HOXC12P31275 282 aa17.46■□□□□ 0.39
SHKBP1-222ENST00000600320 KIR2DL3P43628 341 aa17.46■□□□□ 0.39
SHKBP1-222ENST00000600320 CAPZA2P47755 286 aa17.46■□□□□ 0.39
SHKBP1-222ENST00000600320 RPS7P62081 194 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-222ENST00000600320 PIGFQ07326 219 aa17.46■□□□□ 0.39
SHKBP1-222ENST00000600320 PPA1Q15181 289 aa17.46■□□□□ 0.39
SHKBP1-222ENST00000600320 USP51Q70EK9 711 aa17.46■□□□□ 0.39
SHKBP1-222ENST00000600320 MDP1Q86V88 176 aa17.46■□□□□ 0.39
SHKBP1-222ENST00000600320 RHOXF1Q8NHV9 184 aa17.46■□□□□ 0.39
SHKBP1-222ENST00000600320 HSD17B8Q92506 261 aa17.46■□□□□ 0.39
SHKBP1-222ENST00000600320 APOL4Q9BPW4 351 aa17.46■□□□□ 0.39
SHKBP1-222ENST00000600320 WDR76Q9H967 626 aa17.46■□□□□ 0.39
SHKBP1-222ENST00000600320 OBP2BQ9NPH6 170 aa17.46■□□□□ 0.39
SHKBP1-222ENST00000600320 NDRG3Q9UGV2 375 aa17.46■□□□□ 0.39
SHKBP1-222ENST00000600320 COMMD3-BMI1R4GMX3 469 aa17.46■□□□□ 0.39
SHKBP1-222ENST00000600320 ICE1Q9Y2F5 2266 aa17.46■□□□□ 0.39
SHKBP1-222ENST00000600320 DOPEY2Q9Y3R5 2298 aa17.45■□□□□ 0.38
SHKBP1-222ENST00000600320 ENTPD6O75354 484 aa17.45■□□□□ 0.38
SHKBP1-222ENST00000600320 CST2P09228 141 aa17.45■□□□□ 0.38
SHKBP1-222ENST00000600320 CD79AP11912 226 aa17.45■□□□□ 0.38
SHKBP1-222ENST00000600320 ZNF32P17041 273 aa17.45■□□□□ 0.38
SHKBP1-222ENST00000600320 FMO3P31513 532 aa17.45■□□□□ 0.38
SHKBP1-222ENST00000600320 RPS27P42677 84 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-222ENST00000600320 GUCA1AP43080 201 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-222ENST00000600320 LSM6P62312 80 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-222ENST00000600320 IL5RAQ01344 420 aa17.45■□□□□ 0.38
SHKBP1-222ENST00000600320 MAD2L1BPQ15013 274 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-222ENST00000600320 SLC35D3Q5M8T2 416 aa17.45■□□□□ 0.38
SHKBP1-222ENST00000600320 SP5Q6BEB4 398 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-222ENST00000600320 MEPCEQ7L2J0 689 aaKnown RBP17.45■□□□□ 0.38
SHKBP1-222ENST00000600320 MUCL1Q96DR8 90 aa17.45■□□□□ 0.38
SHKBP1-222ENST00000600320 ZNF75AQ96N20 296 aa17.45■□□□□ 0.38
SHKBP1-222ENST00000600320 DACH2Q96NX9 599 aa17.45■□□□□ 0.38
SHKBP1-222ENST00000600320 TEAD3Q99594 435 aa17.45■□□□□ 0.38
SHKBP1-222ENST00000600320 MARCH7Q9H992 704 aa17.45■□□□□ 0.38
SHKBP1-222ENST00000600320 HECTD1Q9ULT8 2610 aa17.45■□□□□ 0.38
SHKBP1-222ENST00000600320 SELENOFO60613 162 aa17.44■□□□□ 0.38
SHKBP1-222ENST00000600320 UBL3O95164 117 aa17.44■□□□□ 0.38
SHKBP1-222ENST00000600320 HRGP04196 525 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms