RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 NANOS1Q8WY41 292 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-221ENST00000599833 LRTOMTQ8WZ04 291 aa16.88■□□□□ 0.29
SHKBP1-221ENST00000599833 NRBF2Q96F24 287 aa16.88■□□□□ 0.29
SHKBP1-221ENST00000599833 FOXN4Q96NZ1 517 aa16.88■□□□□ 0.29
SHKBP1-221ENST00000599833 CCL19Q99731 98 aa16.88■□□□□ 0.29
SHKBP1-221ENST00000599833 DHRS9Q9BPW9 319 aa16.88■□□□□ 0.29
SHKBP1-221ENST00000599833 TRAF4Q9BUZ4 470 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-221ENST00000599833 GRIP2Q9C0E4 1043 aa16.88■□□□□ 0.29
SHKBP1-221ENST00000599833 ZNF701Q9NV72 531 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-221ENST00000599833 BEX4Q9NWD9 120 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-221ENST00000599833 COA3Q9Y2R0 106 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-221ENST00000599833 AP4S1Q9Y587 144 aa16.88■□□□□ 0.29
SHKBP1-221ENST00000599833 FLNAP21333 2647 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-221ENST00000599833 ZANQ9Y493 2812 aa16.87■□□□□ 0.29
SHKBP1-221ENST00000599833 GNGT2O14610 69 aa16.87■□□□□ 0.29
SHKBP1-221ENST00000599833 MPZL1O95297 269 aa16.87■□□□□ 0.29
SHKBP1-221ENST00000599833 FARS2O95363 451 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-221ENST00000599833 TTKP33981 857 aa16.87■□□□□ 0.29
SHKBP1-221ENST00000599833 KCNMB1Q16558 191 aa16.87■□□□□ 0.29
SHKBP1-221ENST00000599833 MST1LQ2TV78 715 aa16.87■□□□□ 0.29
SHKBP1-221ENST00000599833 SLC35F1Q5T1Q4 408 aa16.87■□□□□ 0.29
SHKBP1-221ENST00000599833 DPPA2Q7Z7J5 298 aa16.87■□□□□ 0.29
SHKBP1-221ENST00000599833 CPEB3Q8NE35 698 aaKnown RBP16.87■□□□□ 0.29
SHKBP1-221ENST00000599833 SDR9C7Q8NEX9 313 aa16.87■□□□□ 0.29
SHKBP1-221ENST00000599833 NUP37Q8NFH4 326 aa16.87■□□□□ 0.29
SHKBP1-221ENST00000599833 ZNF416Q9BWM5 594 aa16.87■□□□□ 0.29
SHKBP1-221ENST00000599833 TSSK6Q9BXA6 273 aa16.87■□□□□ 0.29
SHKBP1-221ENST00000599833 WNT5BQ9H1J7 359 aa16.87■□□□□ 0.29
SHKBP1-221ENST00000599833 FN3KQ9H479 309 aa16.87■□□□□ 0.29
SHKBP1-221ENST00000599833 EMC7Q9NPA0 242 aa16.87■□□□□ 0.29
SHKBP1-221ENST00000599833 B9D1Q9UPM9 204 aa16.87■□□□□ 0.29
SHKBP1-221ENST00000599833 A0A1W2PPL8 197 aa16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 KHDRBS3O75525 346 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 CIB2O75838 187 aa16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 CRYAAP02489 173 aa16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 MSR1P21757 451 aa16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 DAPP51397 102 aa16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 ART1P52961 327 aa16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 PSG4Q00888 419 aa16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 SGCAQ16586 387 aa16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 SLC36A2Q495M3 483 aa16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 SLC36A3Q495N2 470 aa16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 SLC37A3Q8NCC5 494 aa16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 OR52L1Q8NGH7 329 aa16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 OR52E2Q8NGJ4 325 aa16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 OR5K1Q8NHB7 308 aa16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 PIGTQ969N2 578 aa16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 RBM4Q9BWF3 364 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 NMNAT2Q9BZQ4 307 aa16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 RACGAP1Q9H0H5 632 aa16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 TBC1D23Q9NUY8 699 aa16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 LAMP3Q9UQV4 416 aa16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 ATP23Q9Y6H3 246 aa16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 F8P00451 2351 aa16.86■□□□□ 0.29
SHKBP1-221ENST00000599833 ENTPD5O75356 428 aa16.85■□□□□ 0.29
SHKBP1-221ENST00000599833 E2F6O75461 281 aa16.85■□□□□ 0.29
SHKBP1-221ENST00000599833 RAB36O95755 333 aa16.85■□□□□ 0.29
SHKBP1-221ENST00000599833 SWI5Q1ZZU3 235 aa16.85■□□□□ 0.29
SHKBP1-221ENST00000599833 PABPC1L2AQ5JQF8 200 aa16.85■□□□□ 0.29
SHKBP1-221ENST00000599833 ACSM5Q6NUN0 579 aa16.85■□□□□ 0.29
SHKBP1-221ENST00000599833 ZNF544Q6NX49 715 aa16.85■□□□□ 0.29
SHKBP1-221ENST00000599833 SPNS3Q6ZMD2 512 aa16.85■□□□□ 0.29
SHKBP1-221ENST00000599833 AMIGO2Q86SJ2 522 aa16.85■□□□□ 0.29
SHKBP1-221ENST00000599833 GLB1L2Q8IW92 636 aa16.85■□□□□ 0.29
SHKBP1-221ENST00000599833 IQCF1Q8N6M8 205 aa16.85■□□□□ 0.29
SHKBP1-221ENST00000599833 PYDC1Q8WXC3 89 aa16.85■□□□□ 0.29
SHKBP1-221ENST00000599833 GSX2Q9BZM3 304 aa16.85■□□□□ 0.29
SHKBP1-221ENST00000599833 GABARAPL1Q9H0R8 117 aa16.85■□□□□ 0.29
SHKBP1-221ENST00000599833 CA10Q9NS85 328 aa16.85■□□□□ 0.29
SHKBP1-221ENST00000599833 ITGB1BP2Q9UKP3 347 aa16.85■□□□□ 0.29
SHKBP1-221ENST00000599833 LOC100509620A0A075B734 347 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 TMCC2O75069 709 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 TFP02787 698 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 PSKH1P11801 424 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 OSMP13725 252 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 ANXA8P13928 327 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 NR4A1P22736 598 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 FASP25445 335 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 ADIPOQQ15848 244 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 SYT9Q86SS6 491 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 JAZF1Q86VZ6 243 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 LRRC75A-AS1Q8N1F1 130 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 CYB561A3Q8NBI2 242 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 IL17RDQ8NFM7 739 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 SLC26A10Q8NG04 563 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 OR2T33Q8NG76 320 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 OR4F15Q8NGB8 312 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 AKR7LQ8NHP1 331 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 TMEM171Q8WVE6 324 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 C11orf40Q8WZ69 217 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 OR2H1Q9GZK4 316 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 SRA1Q9HD15 236 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 RPRD1BQ9NQG5 326 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 FBXL3Q9UKT7 428 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 EDARQ9UNE0 448 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 BAIAP2Q9UQB8 552 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 FKBP7Q9Y680 259 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 ACANP16112 2415 aa16.84■□□□□ 0.29
SHKBP1-221ENST00000599833 TEP1Q99973 2627 aaKnown RBP16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms