RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 AVPR2P30518 371 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 DDOSTP39656 456 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 NKX2-5P52952 324 aaPredicted RBP12.91□□□□□ -0.34
VRK3-217ENST00000599538 BLVRAP53004 296 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 RPS15P62841 145 aaKnown RBP12.91□□□□□ -0.34
VRK3-217ENST00000599538 DGCR2P98153 550 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 MRPL28Q13084 256 aaKnown RBP12.91□□□□□ -0.34
VRK3-217ENST00000599538 PLA2G7Q13093 441 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 FDX2Q6P4F2 183 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 GPR148Q8TDV2 347 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 RFT1Q96AA3 541 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 UPRTQ96BW1 309 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.91□□□□□ -0.34
VRK3-217ENST00000599538 RNF121Q9H920 327 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 KLHL13Q9P2N7 655 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 CACNA1HO95180 2353 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 A0A0G2JMM0 328 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 LOC101059948A0A1B0GTJ6 334 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 A0A1W2PPB8 328 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 A0A1W2PRS3 328 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 KIR3DP1A8MWS1 328 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 INPP1P49441 399 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 RASGEF1BQ0VAM2 473 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 GPR176Q14439 515 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 CARD17Q5XLA6 110 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 PYHIN1Q6K0P9 492 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 C6orf15Q6UXA7 325 aaPredicted RBP12.91□□□□□ -0.34
VRK3-217ENST00000599538 EGFL6Q8IUX8 553 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 CHAC2Q8WUX2 184 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 C11orf40Q8WZ69 217 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 MCHR2Q969V1 340 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 NTNG2Q96CW9 530 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 HPF1Q9NWY4 346 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 FOXJ2Q9P0K8 574 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 AKAP7Q9P0M2 348 aaPredicted RBP12.91□□□□□ -0.34
VRK3-217ENST00000599538 OR5V1Q9UGF6 321 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 TEKT2Q9UIF3 430 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 POU2F3Q9UKI9 436 aa12.91□□□□□ -0.34
VRK3-217ENST00000599538 EIF1AYO14602 144 aaKnown RBP12.9□□□□□ -0.34
VRK3-217ENST00000599538 GPR171O14626 319 aa12.9□□□□□ -0.34
VRK3-217ENST00000599538 PDCD5O14737 125 aa12.9□□□□□ -0.34
VRK3-217ENST00000599538 ZIC3O60481 467 aa12.9□□□□□ -0.34
VRK3-217ENST00000599538 SRSF10O75494 262 aaKnown RBP12.9□□□□□ -0.34
VRK3-217ENST00000599538 PRKAR1AP10644 381 aa12.9□□□□□ -0.34
VRK3-217ENST00000599538 LIFP15018 202 aa12.9□□□□□ -0.34
VRK3-217ENST00000599538 ZNF823P16415 610 aa12.9□□□□□ -0.34
VRK3-217ENST00000599538 RIDAP52758 137 aaKnown RBP12.9□□□□□ -0.34
VRK3-217ENST00000599538 PCK2Q16822 640 aa12.9□□□□□ -0.34
VRK3-217ENST00000599538 SLC36A2Q495M3 483 aa12.9□□□□□ -0.34
VRK3-217ENST00000599538 SLC22A10Q63ZE4 541 aa12.9□□□□□ -0.34
VRK3-217ENST00000599538 TMEM225Q6GV28 225 aa12.9□□□□□ -0.34
VRK3-217ENST00000599538 KCTD18Q6PI47 426 aaPredicted RBP12.9□□□□□ -0.34
VRK3-217ENST00000599538 UEVLDQ8IX04 471 aa12.9□□□□□ -0.34
VRK3-217ENST00000599538 YIPF5Q969M3 257 aa12.9□□□□□ -0.34
VRK3-217ENST00000599538 SPRY4Q9C004 299 aa12.9□□□□□ -0.34
VRK3-217ENST00000599538 EMC9Q9Y3B6 208 aa12.9□□□□□ -0.34
VRK3-217ENST00000599538 NCKAP5O14513 1909 aa12.9□□□□□ -0.35
VRK3-217ENST00000599538 A0A1W2PQ72 361 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 HSPB2A8KAH6 182 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 CENPBD1B2RD01 187 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 KHDRBS3O75525 346 aaKnown RBP12.89□□□□□ -0.35
VRK3-217ENST00000599538 CCNKO75909 580 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 PGA4P0DJD7 388 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 PGA3P0DJD8 388 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 SDHBP21912 280 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 MAPK3P27361 379 aaPredicted RBP12.89□□□□□ -0.35
VRK3-217ENST00000599538 CDAP32320 146 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 EIF1AXP47813 144 aaKnown RBP12.89□□□□□ -0.35
VRK3-217ENST00000599538 DNASE1L1P49184 302 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 HSPB2Q16082 182 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 TMEM81Q6P7N7 255 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 PLET1Q6UQ28 207 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 TMPRSS12Q86WS5 348 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 CATSPERDQ86XM0 798 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 DUSP18Q8NEJ0 188 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 OR6F1Q8NGZ6 308 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 TSEN15Q8WW01 171 aaKnown RBP12.89□□□□□ -0.35
VRK3-217ENST00000599538 ZC3HAV1LQ96H79 300 aaKnown RBP12.89□□□□□ -0.35
VRK3-217ENST00000599538 AUNIPQ9H7T9 357 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 RTTNQ86VV8 2226 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 IGHV3-15A0A0B4J1V0 119 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 FAM240BA0A1B0GVZ2 78 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 OR2M5A3KFT3 312 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 FAM47E-STBD1D6RA91 191 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 SULT2B1O00204 365 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 UBL3O95164 117 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 F10P00742 488 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 JMJD7P0C870 316 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 PTHLHP12272 177 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 ADH6P28332 368 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 BTCP35070 178 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 EIF1P41567 113 aaKnown RBP12.89□□□□□ -0.35
VRK3-217ENST00000599538 CCR9P51686 369 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 UBE2NLQ5JXB2 153 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 RAET1LQ5VY80 246 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 DNM1P34Q6PK57 102 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 KRT74Q7RTS7 529 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 NAXDQ8IW45 347 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 GTPBP8Q8N3Z3 284 aaPredicted RBP12.89□□□□□ -0.35
VRK3-217ENST00000599538 OR10S1Q8NGN2 331 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms