RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 RAB39BQ96DA2 213 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 TIMD4Q96H15 378 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 LRRC37BQ96QE4 947 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 RACGAP1Q9H0H5 632 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 OCEL1Q9H607 264 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 METTL17Q9H7H0 456 aaPredicted RBP8.37□□□□□ -1.07
VRK3-216ENST00000599342 SAP30LQ9HAJ7 183 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 NKIRAS2Q9NYR9 191 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 TREM2Q9NZC2 230 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 ARMCX1Q9P291 453 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 METRNQ9UJH8 293 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 A4GNTQ9UNA3 340 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 UGT2A1Q9Y4X1 527 aa8.37□□□□□ -1.07
VRK3-216ENST00000599342 TRAV27A0A087WT01 109 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 IGKV1D-43A0A0B4J1Z2 117 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 TRAV20A0A0B4J274 112 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 EFCAB9A8MZ26 197 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 FAM157AC9JC47 383 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 WNT9BO14905 357 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 ZNF682O95780 498 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 IGHV3-13P01766 116 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 ITGA2P17301 1181 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 LAP3P28838 519 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 YAP1P46937 504 aaKnown RBP8.36□□□□□ -1.07
VRK3-216ENST00000599342 SLC9A3P48764 834 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 ZNF81P51508 661 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 ARHGDIAP52565 204 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 PSG4Q00888 419 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 MVKQ03426 396 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 TRAM2Q15035 370 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 TSTQ16762 297 aaKnown RBP8.36□□□□□ -1.07
VRK3-216ENST00000599342 HFEQ30201 348 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 ANKDD1AQ495B1 522 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 FAM209AQ5JX71 171 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 SPATA46Q5T0L3 261 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 AVPI1Q5T686 147 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 FAM27BQ5VT28 67 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 CGB2Q6NT52 195 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 SLC25A47Q6Q0C1 308 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 ZNF730Q6ZMV8 503 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 USP51Q70EK9 711 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 FKBP9P1Q75LS8 142 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 RRM2BQ7LG56 351 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 VTCN1Q7Z7D3 282 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 OAFQ86UD1 273 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 IGFN1Q86VF2 1251 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 NRMQ8IXM6 262 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 C1orf174Q8IYL3 243 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 OFCC1Q8IZS5 231 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 TEX29Q8N6K0 151 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 POU5F2Q8N7G0 328 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 CLDN22Q8N7P3 220 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 OR51A7Q8NH64 312 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 AKR7LQ8NHP1 331 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 RP9Q8TA86 221 aaKnown RBP8.36□□□□□ -1.07
VRK3-216ENST00000599342 ABHD4Q8TB40 342 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 NMD3Q96D46 503 aaKnown RBP8.36□□□□□ -1.07
VRK3-216ENST00000599342 POM121L2Q96KW2 1035 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 OR2H1Q9GZK4 316 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 NDEL1Q9GZM8 345 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 CYSLTR2Q9NS75 346 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 RHCGQ9UBD6 479 aa8.36□□□□□ -1.07
VRK3-216ENST00000599342 ATRQ13535 2644 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 C12orf71A8MTZ7 269 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 J3KTA2 159 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 CXCR6O00574 342 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 XKRYO14609 159 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 SPRY3O43610 288 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 PNPP00491 289 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 CST2P09228 141 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 MAKP20794 623 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 MSR1P21757 451 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 RPL4P36578 427 aaKnown RBP8.35□□□□□ -1.07
VRK3-216ENST00000599342 LIPAP38571 399 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 WNT5AP41221 380 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 CRYBB2P43320 205 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 LIPEQ05469 1076 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 PRKCDQ05655 676 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 IFI44LQ53G44 452 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 HSP90B2PQ58FF3 399 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 ZMAT1Q5H9K5 638 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 MBNL2Q5VZF2 373 aaKnown RBP8.35□□□□□ -1.07
VRK3-216ENST00000599342 ACSM5Q6NUN0 579 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 FAHD2BQ6P2I3 314 aaPredicted RBP8.35□□□□□ -1.07
VRK3-216ENST00000599342 ARL9Q6T311 187 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 CYP4Z1Q86W10 505 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 MEX3DQ86XN8 651 aaKnown RBP8.35□□□□□ -1.07
VRK3-216ENST00000599342 ZNF101Q8IZC7 436 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 RNF113BQ8IZP6 322 aaKnown RBP8.35□□□□□ -1.07
VRK3-216ENST00000599342 OR13C2Q8NGS9 318 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 SLC25A40Q8TBP6 338 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 IPCEF1Q8WWN9 437 aaPredicted RBP8.35□□□□□ -1.07
VRK3-216ENST00000599342 ACOT11Q8WXI4 607 aaPredicted RBP8.35□□□□□ -1.07
VRK3-216ENST00000599342 GTF3AQ92664 365 aaKnown RBP8.35□□□□□ -1.07
VRK3-216ENST00000599342 RAB1CQ92928 201 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 ELMOD3Q96FG2 381 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 FAHD2AQ96GK7 314 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 OR2J1Q9GZK6 312 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 EGLN1Q9GZT9 426 aa8.35□□□□□ -1.07
VRK3-216ENST00000599342 ZNF665Q9H7R5 613 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms