RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 HLA-DQA2P01906 255 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 CST2P09228 141 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 CBR1P16152 277 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 SPI1P17947 270 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 PYCR1P32322 319 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 ARR3P36575 388 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 PTDSS1P48651 473 aaKnown RBP12.52□□□□□ -0.41
VRK3-213ENST00000597215 RAB1AP62820 205 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 HSF2Q03933 536 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 TLE4Q04727 773 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 ZIK1Q3SY52 487 aaPredicted RBP12.52□□□□□ -0.41
VRK3-213ENST00000597215 NCMAPQ5T1S8 102 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 OGFRL1Q5TC84 451 aaPredicted RBP12.52□□□□□ -0.41
VRK3-213ENST00000597215 TMEM53Q6P2H8 277 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 TMEM108Q6UXF1 575 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 ZNF295-AS1Q8N0V1 137 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 GALNT4Q8N4A0 578 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 PIK3IP1Q96FE7 263 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 WACQ9BTA9 647 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 GRIP2Q9C0E4 1043 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 TOR3AQ9H497 397 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 RNF121Q9H920 327 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 CCNB1IP1Q9NPC3 277 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 B3GNT2Q9NY97 397 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 CRNNQ9UBG3 495 aaPredicted RBP12.52□□□□□ -0.41
VRK3-213ENST00000597215 NKX1-2Q9UD57 310 aaPredicted RBP12.52□□□□□ -0.41
VRK3-213ENST00000597215 FBXL3Q9UKT7 428 aa12.52□□□□□ -0.41
VRK3-213ENST00000597215 CRYBG3Q68DQ2 2970 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 FAM221AA4D161 298 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 C12orf71A8MTZ7 269 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 FAM171A2A8MVW0 826 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 SNAP29O95721 258 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 IGKV3-15P01624 115 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 IGLV1-44P01699 117 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 HRGP04196 525 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 GYPBP06028 91 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 PATE4P0C8F1 98 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 GAAP10253 952 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 PTAFRP25105 342 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 BLVRAP53004 296 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 CDC42P60953 191 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 PCBD1P61457 104 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 LSM6P62312 80 aaKnown RBP12.51□□□□□ -0.41
VRK3-213ENST00000597215 PIGFQ07326 219 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 BSPH1Q075Z2 132 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 RIPK1Q13546 671 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 ENDOGQ14249 297 aaKnown RBP12.51□□□□□ -0.41
VRK3-213ENST00000597215 KCNMB1Q16558 191 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 PLBD1Q6P4A8 553 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 CXXC5Q7LFL8 322 aaKnown RBP12.51□□□□□ -0.41
VRK3-213ENST00000597215 SYT9Q86SS6 491 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 CPOQ8IVL8 374 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 SLC26A10Q8NG04 563 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 OR10H5Q8NGA6 315 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 FGFBP3Q8TAT2 258 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 C11orf40Q8WZ69 217 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 FBXO17Q96EF6 278 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 MBOAT4Q96T53 435 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 ZNF416Q9BWM5 594 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 HCAR1Q9BXC0 346 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 VCXQ9H320 206 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 MED20Q9H944 212 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 NOX3Q9HBY0 568 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 EMC7Q9NPA0 242 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 HINT3Q9NQE9 182 aaKnown RBP12.51□□□□□ -0.41
VRK3-213ENST00000597215 RASSF1Q9NS23 344 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 SMPD3Q9NY59 655 aaPredicted RBP12.51□□□□□ -0.41
VRK3-213ENST00000597215 MOKQ9UQ07 419 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 POLR1DQ9Y2S0 133 aa12.51□□□□□ -0.41
VRK3-213ENST00000597215 RRP15Q9Y3B9 282 aaKnown RBP12.51□□□□□ -0.41
VRK3-213ENST00000597215 MAST4O15021 2626 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 IGHV1-18A0A0C4DH31 117 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 DPRXA6NFQ7 191 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 PRODHO43272 600 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 PRKYO43930 277 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 CTAG2O75638 210 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 MPZL1O95297 269 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 GPANK1O95872 356 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 SCG5P05408 212 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 CD3EP07766 207 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 MMP7P09237 267 aaPredicted RBP12.5□□□□□ -0.41
VRK3-213ENST00000597215 CLUP10909 449 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 ZNF32P17041 273 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 CD40P25942 277 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 LOXP28300 417 aaPredicted RBP12.5□□□□□ -0.41
VRK3-213ENST00000597215 FMO3P31513 532 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 IDH3GP51553 393 aaPredicted RBP12.5□□□□□ -0.41
VRK3-213ENST00000597215 TEKQ02763 1124 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 DBPQ10586 325 aaPredicted RBP12.5□□□□□ -0.41
VRK3-213ENST00000597215 AQP6Q13520 282 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 UGT2A3Q6UWM9 527 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 TMEM200AQ86VY9 491 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 TCEANCQ8N8B7 351 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 OR51L1Q8NGJ5 315 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 OR6K6Q8NGW6 343 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 FAM81AQ8TBF8 368 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 TMEM163Q8TC26 289 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 PTP4A1Q93096 173 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 HRASLS5Q96KN8 279 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 KCNS3Q9BQ31 491 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms