RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 POMGNT2Q8NAT1 580 aa13.15□□□□□ -0.3
TRIM28-207ENST00000597136 OR2T4Q8NH00 348 aa13.15□□□□□ -0.3
TRIM28-207ENST00000597136 ZNRF4Q8WWF5 429 aa13.15□□□□□ -0.3
TRIM28-207ENST00000597136 RFKQ969G6 155 aa13.15□□□□□ -0.3
TRIM28-207ENST00000597136 MCHR2Q969V1 340 aa13.15□□□□□ -0.3
TRIM28-207ENST00000597136 MED18Q9BUE0 208 aa13.15□□□□□ -0.3
TRIM28-207ENST00000597136 LINC00470Q9BZP3 86 aa13.15□□□□□ -0.3
TRIM28-207ENST00000597136 RERGLQ9H628 205 aa13.15□□□□□ -0.3
TRIM28-207ENST00000597136 NDRG3Q9UGV2 375 aa13.15□□□□□ -0.3
TRIM28-207ENST00000597136 B9D1Q9UPM9 204 aa13.15□□□□□ -0.3
TRIM28-207ENST00000597136 TEX15Q9BXT5 2789 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 IGLV1-36A0A0B4J1U3 117 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 A0A1W2PR80 420 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 CCDC182A6NF36 153 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 OR6C65A6NJZ3 312 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 KRT33AO76009 404 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 IL32P24001 234 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 HTR1FP30939 366 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 PYCR1P32322 319 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 ZNF133P52736 654 aaPredicted RBP13.14□□□□□ -0.31
TRIM28-207ENST00000597136 NUDT6P53370 316 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 CDH11P55287 796 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 ROR2Q01974 943 aaKnown RBP13.14□□□□□ -0.31
TRIM28-207ENST00000597136 ETFDHQ16134 617 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 GABRA6Q16445 453 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 ALKBH2Q6NS38 261 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 SLC25A47Q6Q0C1 308 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 GPR137CQ8N3F9 429 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 PROKR2Q8NFJ6 384 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 OR51L1Q8NGJ5 315 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 TEAD3Q99594 435 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 HDHD5Q9BXW7 423 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 RACGAP1Q9H0H5 632 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 GPR35Q9HC97 309 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 AMBNQ9NP70 447 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 CSMD2Q7Z408 3487 aa13.14□□□□□ -0.31
TRIM28-207ENST00000597136 RAI1Q7Z5J4 1906 aaPredicted RBP13.14□□□□□ -0.31
TRIM28-207ENST00000597136 CIB4A0PJX0 185 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 SNTNA6NMZ2 147 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 FAM171A2A8MVW0 826 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 SIAH2O43255 324 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 KHDRBS3O75525 346 aaKnown RBP13.13□□□□□ -0.31
TRIM28-207ENST00000597136 CXCR4P61073 352 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 CSNK2BP67870 215 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 TAB1Q15750 504 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 SLC35D3Q5M8T2 416 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 C10orf128Q5T292 105 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 DNM1P34Q6PK57 102 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 UGT2A3Q6UWM9 527 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 B3GLCTQ6Y288 498 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 ZNF786Q8N393 782 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 BPIFB6Q8NFQ5 453 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 STEAP2Q8NFT2 490 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 FAM222BQ8WU58 562 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 NSMAFQ92636 917 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 DACH2Q96NX9 599 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 ULBP2Q9BZM5 246 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 CRLF2Q9HC73 371 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 B3GAT2Q9NPZ5 323 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 PLCXD1Q9NUJ7 323 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 TAS2R16Q9NYV7 291 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 KCNN3Q9UGI6 736 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRIM28-207ENST00000597136 MOKQ9UQ07 419 aa13.13□□□□□ -0.31
TRIM28-207ENST00000597136 SLC22A31A6NKX4 558 aa13.12□□□□□ -0.31
TRIM28-207ENST00000597136 ZNF587BE7ETH6 402 aa13.12□□□□□ -0.31
TRIM28-207ENST00000597136 SLC1A7O00341 560 aa13.12□□□□□ -0.31
TRIM28-207ENST00000597136 XPNPEP2O43895 674 aa13.12□□□□□ -0.31
TRIM28-207ENST00000597136 GLCEO94923 617 aa13.12□□□□□ -0.31
TRIM28-207ENST00000597136 MPGP29372 298 aa13.12□□□□□ -0.31
TRIM28-207ENST00000597136 RPS7P62081 194 aaKnown RBP13.12□□□□□ -0.31
TRIM28-207ENST00000597136 ARF1P84077 181 aaKnown RBP13.12□□□□□ -0.31
TRIM28-207ENST00000597136 ZNF91Q05481 1191 aa13.12□□□□□ -0.31
TRIM28-207ENST00000597136 TMED1Q13445 227 aa13.12□□□□□ -0.31
TRIM28-207ENST00000597136 STK11Q15831 433 aa13.12□□□□□ -0.31
TRIM28-207ENST00000597136 CEACAM16Q2WEN9 425 aa13.12□□□□□ -0.31
TRIM28-207ENST00000597136 LINC01590Q5TEZ4 76 aa13.12□□□□□ -0.31
TRIM28-207ENST00000597136 OR6K6Q8NGW6 343 aa13.12□□□□□ -0.31
TRIM28-207ENST00000597136 ZMYND19Q96E35 227 aaPredicted RBP13.12□□□□□ -0.31
TRIM28-207ENST00000597136 WARS2Q9UGM6 360 aaKnown RBP13.12□□□□□ -0.31
TRIM28-207ENST00000597136 COA3Q9Y2R0 106 aaPredicted RBP13.12□□□□□ -0.31
TRIM28-207ENST00000597136 RPL36Q9Y3U8 105 aaKnown RBP13.12□□□□□ -0.31
TRIM28-207ENST00000597136 ARID1AO14497 2285 aa13.12□□□□□ -0.31
TRIM28-207ENST00000597136 RPL36A-HNRNPH2H7BZ11 118 aa13.11□□□□□ -0.31
TRIM28-207ENST00000597136 DHHO43323 396 aa13.11□□□□□ -0.31
TRIM28-207ENST00000597136 SEC14L2O76054 403 aa13.11□□□□□ -0.31
TRIM28-207ENST00000597136 CCDC159P0C7I6 412 aa13.11□□□□□ -0.31
TRIM28-207ENST00000597136 DBTP11182 482 aaKnown RBP13.11□□□□□ -0.31
TRIM28-207ENST00000597136 GSTT1P30711 240 aa13.11□□□□□ -0.31
TRIM28-207ENST00000597136 PEX19P40855 299 aa13.11□□□□□ -0.31
TRIM28-207ENST00000597136 MTNR1AP48039 350 aa13.11□□□□□ -0.31
TRIM28-207ENST00000597136 CHN2P52757 468 aa13.11□□□□□ -0.31
TRIM28-207ENST00000597136 KRTAP10-9P60411 292 aa13.11□□□□□ -0.31
TRIM28-207ENST00000597136 GLO1Q04760 184 aa13.11□□□□□ -0.31
TRIM28-207ENST00000597136 HIKESHIQ53FT3 197 aa13.11□□□□□ -0.31
TRIM28-207ENST00000597136 RBM48Q5RL73 367 aaKnown RBP13.11□□□□□ -0.31
TRIM28-207ENST00000597136 SEZ6L2Q6UXD5 910 aa13.11□□□□□ -0.31
TRIM28-207ENST00000597136 WFDC8Q8IUA0 241 aa13.11□□□□□ -0.31
TRIM28-207ENST00000597136 GLB1L2Q8IW92 636 aa13.11□□□□□ -0.31
TRIM28-207ENST00000597136 WDR31Q8NA23 367 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms