RNA–Protein interactions for RNA: ENST00000596842.5

UPF1-204, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,825 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-204ENST00000596842 RAB3DO95716 219 aa13.82□□□□□ -0.2
UPF1-204ENST00000596842 S1PR1P21453 382 aa13.82□□□□□ -0.2
UPF1-204ENST00000596842 FOXL2P58012 376 aa13.82□□□□□ -0.2
UPF1-204ENST00000596842 ZNF74Q16587 644 aa13.82□□□□□ -0.2
UPF1-204ENST00000596842 STEAP1BQ6NZ63 245 aa13.82□□□□□ -0.2
UPF1-204ENST00000596842 CHRDL2Q6WN34 429 aa13.82□□□□□ -0.2
UPF1-204ENST00000596842 ZNF704Q6ZNC4 412 aaPredicted RBP13.82□□□□□ -0.2
UPF1-204ENST00000596842 ZNF546Q86UE3 836 aa13.82□□□□□ -0.2
UPF1-204ENST00000596842 FAM219AQ8IW50 185 aa13.82□□□□□ -0.2
UPF1-204ENST00000596842 MRGPRX1Q96LB2 322 aa13.82□□□□□ -0.2
UPF1-204ENST00000596842 ADAT1Q9BUB4 502 aaKnown RBP13.82□□□□□ -0.2
UPF1-204ENST00000596842 CRISPLD2Q9H0B8 497 aa13.82□□□□□ -0.2
UPF1-204ENST00000596842 TCRBV21S2A2A0A5A6 115 aa13.82□□□□□ -0.2
UPF1-204ENST00000596842 CTAG2O75638 210 aa13.82□□□□□ -0.2
UPF1-204ENST00000596842 RAB11BQ15907 218 aa13.82□□□□□ -0.2
UPF1-204ENST00000596842 MESTQ5EB52 335 aa13.82□□□□□ -0.2
UPF1-204ENST00000596842 RAB12Q6IQ22 244 aa13.82□□□□□ -0.2
UPF1-204ENST00000596842 SHISA6Q6ZSJ9 500 aa13.82□□□□□ -0.2
UPF1-204ENST00000596842 GPAT4Q86UL3 456 aa13.82□□□□□ -0.2
UPF1-204ENST00000596842 ZNF524Q96C55 264 aa13.82□□□□□ -0.2
UPF1-204ENST00000596842 KLHL15Q96M94 604 aa13.82□□□□□ -0.2
UPF1-204ENST00000596842 DMRTA2Q96SC8 542 aa13.82□□□□□ -0.2
UPF1-204ENST00000596842 FANCMQ8IYD8 2048 aa13.82□□□□□ -0.2
UPF1-204ENST00000596842 LDOC1O95751 146 aaPredicted RBP13.81□□□□□ -0.2
UPF1-204ENST00000596842 TNFP01375 233 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 AKAIN1P0CW23 69 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 SDHAP31040 664 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 SNRPEP62304 92 aaKnown RBP13.81□□□□□ -0.2
UPF1-204ENST00000596842 ADAM8P78325 824 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 C1orf53Q5VUE5 145 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 TSPAN32Q96QS1 320 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 NXF5Q9H1B4 397 aaKnown RBP13.81□□□□□ -0.2
UPF1-204ENST00000596842 KRBOX1C9JBD0 128 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 MPZL1O95297 269 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 PPP3CBP16298 524 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 GNALP38405 381 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 KLHL26Q53HC5 615 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 RTL10Q7L3V2 364 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 ZNF417Q8TAU3 575 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 THAP3Q8WTV1 239 aaPredicted RBP13.81□□□□□ -0.2
UPF1-204ENST00000596842 RLN3Q8WXF3 142 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 TAAR8Q969N4 342 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 CFHR5Q9BXR6 569 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 BCL2L14Q9BZR8 327 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 MMP25Q9NPA2 562 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 NPTNQ9Y639 398 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 SDC3O75056 442 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 CALCBP10092 127 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 ZNF14P17017 642 aaPredicted RBP13.81□□□□□ -0.2
UPF1-204ENST00000596842 RHOUQ7L0Q8 258 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 LINC00346Q8IVM7 164 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 PRSS35Q8N3Z0 413 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 TGM7Q96PF1 710 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 DHDHQ9UQ10 334 aa13.81□□□□□ -0.2
UPF1-204ENST00000596842 TMEM235A6NFC5 223 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 PRR19A6NJB7 356 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 OR4C45A6NMZ5 311 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 H7C417 338 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 ARPC3O15145 178 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 XRCC3O43542 346 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 TXNDC12O95881 172 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 AKT2P31751 481 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 SLC35D3Q5M8T2 416 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 ELFN2Q5R3F8 820 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 WBP2NLQ6ICG8 309 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 OR51A2Q8NGJ7 313 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 SCARB1Q8WTV0 552 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 ZCCHC4Q9H5U6 513 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 MTFP1Q9UDX5 166 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 TICRRQ7Z2Z1 1910 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 C13orf42A0A1B0GVH6 325 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 SLC22A23A1A5C7 686 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 EFCAB7A8K855 629 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 TNFSF14O43557 240 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 ALOX12BO75342 701 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 CD63P08962 238 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 DNASE1L1P49184 302 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 LUMP51884 338 aaPredicted RBP13.8□□□□□ -0.2
UPF1-204ENST00000596842 GGTLC2Q14390 218 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 SSX2Q16385 188 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 TMEM151BQ8IW70 566 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 STEAP2Q8NFT2 490 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 OR10K1Q8NGX5 313 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 OR11A1Q9GZK7 315 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 TAS2R4Q9NYW5 299 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 COMMD9Q9P000 198 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 MIOXQ9UGB7 285 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 CYP8B1Q9UNU6 501 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 B9D1Q9UPM9 204 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 EEF1E1-BLOC1S5C9J1V9 151 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 GABRA1P14867 456 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 BLOC1S1P78537 153 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 TTLL10Q6ZVT0 673 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 LRRTM1Q86UE6 522 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 GALNT16Q8N428 558 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 SPICQ8N5J4 248 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 OR1J2Q8NGS2 313 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 CMBLQ96DG6 245 aa13.8□□□□□ -0.2
UPF1-204ENST00000596842 SLC25A44Q96H78 314 aaPredicted RBP13.8□□□□□ -0.2
UPF1-204ENST00000596842 PBX4Q9BYU1 374 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms