RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

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Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 MAGEA2P43356 314 aa11.22□□□□□ -0.61
USE1-207ENST00000596136 PDLIM4P50479 330 aa11.22□□□□□ -0.61
USE1-207ENST00000596136 PSG4Q00888 419 aa11.22□□□□□ -0.61
USE1-207ENST00000596136 SGCAQ16586 387 aa11.22□□□□□ -0.61
USE1-207ENST00000596136 TBC1D28Q2M2D7 210 aa11.22□□□□□ -0.61
USE1-207ENST00000596136 DPY19L2P2Q6ZN68 376 aa11.22□□□□□ -0.61
USE1-207ENST00000596136 MCUR1Q96AQ8 359 aa11.22□□□□□ -0.61
USE1-207ENST00000596136 POM121L2Q96KW2 1035 aa11.22□□□□□ -0.61
USE1-207ENST00000596136 BCL2L14Q9BZR8 327 aa11.22□□□□□ -0.61
USE1-207ENST00000596136 C1orf21Q9H246 121 aa11.22□□□□□ -0.61
USE1-207ENST00000596136 VSX1Q9NZR4 365 aaPredicted RBP11.22□□□□□ -0.61
USE1-207ENST00000596136 AURKCQ9UQB9 309 aa11.22□□□□□ -0.61
USE1-207ENST00000596136 V9GYQ6 96 aa11.22□□□□□ -0.61
USE1-207ENST00000596136 IGLV3-9A0A075B6K5 115 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 LOC100509620A0A075B734 347 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 TEX13CA0A0J9YWL9 993 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 TCRBV5S2A0A599 114 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 XKRYO14609 159 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 TLX2O43763 284 aaPredicted RBP11.21□□□□□ -0.61
USE1-207ENST00000596136 ICMTO60725 284 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 KRT36O76013 467 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 SCG5P05408 212 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 ATP6V1B2P21281 511 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 MSR1P21757 451 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 FPR3P25089 353 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 GIFP27352 417 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 APEX1P27695 318 aaKnown RBP11.21□□□□□ -0.61
USE1-207ENST00000596136 LAP3P28838 519 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 GUCA1AP43080 201 aaPredicted RBP11.21□□□□□ -0.61
USE1-207ENST00000596136 RAD52P43351 418 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 GSSP48637 474 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 UCP2P55851 309 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 PCBD1P61457 104 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 SPIBQ01892 262 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 ENDOGQ14249 297 aaKnown RBP11.21□□□□□ -0.61
USE1-207ENST00000596136 TRIM25Q14258 630 aaKnown RBP11.21□□□□□ -0.61
USE1-207ENST00000596136 LCN8Q6JVE9 175 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 C1orf94Q6P1W5 598 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 SMARCD3Q6STE5 483 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 ADCK1Q86TW2 530 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 LRP11Q86VZ4 500 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 ZDHHC21Q8IVQ6 265 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 ZCCHC24Q8N2G6 241 aaKnown RBP11.21□□□□□ -0.61
USE1-207ENST00000596136 POP5Q969H6 163 aaKnown RBP11.21□□□□□ -0.61
USE1-207ENST00000596136 ZNF570Q96NI8 536 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 OR2H1Q9GZK4 316 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 WNT5BQ9H1J7 359 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 LRMDAQ9H2I8 198 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 MS4A5Q9H3V2 200 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 CDH20Q9HBT6 801 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 CCNB1IP1Q9NPC3 277 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 POLE4Q9NR33 117 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 TAS2R1Q9NYW7 299 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 PRPF19Q9UMS4 504 aaKnown RBP11.21□□□□□ -0.61
USE1-207ENST00000596136 TIMM10BQ9Y5J6 103 aa11.21□□□□□ -0.61
USE1-207ENST00000596136 ABCA2Q9BZC7 2435 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 H7C1C5 153 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 IMPA2O14732 288 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 ARPC3O15145 178 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 ERCC1P07992 297 aaPredicted RBP11.2□□□□□ -0.62
USE1-207ENST00000596136 ADRA2AP08913 450 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 CCL2P13500 99 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 CTLA4P16410 223 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 USF1P22415 310 aaPredicted RBP11.2□□□□□ -0.62
USE1-207ENST00000596136 STOMP27105 288 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 RRM2P31350 389 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 APLNRP35414 380 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 NR4A2P43354 598 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 LCN6P62502 163 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 MS4A2Q01362 244 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 HSF2Q03933 536 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 KRR1Q13601 381 aaKnown RBP11.2□□□□□ -0.62
USE1-207ENST00000596136 TMEM249Q2WGJ8 235 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 RFX4Q33E94 735 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 RGS7BPQ6MZT1 257 aaPredicted RBP11.2□□□□□ -0.62
USE1-207ENST00000596136 CYP2R1Q6VVX0 501 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 RINLQ6ZS11 566 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 ALDH16A1Q8IZ83 802 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 ZNF786Q8N393 782 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 RASD2Q96D21 266 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 FOXN4Q96NZ1 517 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 ZNF416Q9BWM5 594 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 TRIM15Q9C019 465 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 MAGIXQ9H6Y5 334 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 MYEF2Q9P2K5 600 aaKnown RBP11.2□□□□□ -0.62
USE1-207ENST00000596136 REV1Q9UBZ9 1251 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 IER3IP1Q9Y5U9 82 aa11.2□□□□□ -0.62
USE1-207ENST00000596136 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.19□□□□□ -0.628e-8■■■□□ 16.9
USE1-207ENST00000596136 C12orf71A8MTZ7 269 aa11.19□□□□□ -0.62
USE1-207ENST00000596136 INAFM1C9JVW0 142 aa11.19□□□□□ -0.62
USE1-207ENST00000596136 M0R233 179 aa11.19□□□□□ -0.62
USE1-207ENST00000596136 OR10H3O60404 316 aa11.19□□□□□ -0.62
USE1-207ENST00000596136 STAMBPO95630 424 aa11.19□□□□□ -0.62
USE1-207ENST00000596136 FAM157BP0CG42 384 aa11.19□□□□□ -0.62
USE1-207ENST00000596136 COX5BP10606 129 aa11.19□□□□□ -0.62
USE1-207ENST00000596136 IFNGR2P38484 337 aa11.19□□□□□ -0.62
USE1-207ENST00000596136 WNT5AP41221 380 aa11.19□□□□□ -0.62
USE1-207ENST00000596136 CDKN2AP42771 156 aaKnown RBP11.19□□□□□ -0.62
USE1-207ENST00000596136 RPS6KA3P51812 740 aa11.19□□□□□ -0.62
USE1-207ENST00000596136 LSM6P62312 80 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms