RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 TMEM27Q9HBJ8 222 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 HRASLSQ9HDD0 168 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 SIDT1Q9NXL6 827 aaKnown RBP13.93□□□□□ -0.18
PNKP-204ENST00000594661 ZNF629Q9UEG4 869 aaPredicted RBP13.93□□□□□ -0.18
PNKP-204ENST00000594661 CAMK2AQ9UQM7 478 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 PLEKHA6Q9Y2H5 1048 aa13.93□□□□□ -0.18
PNKP-204ENST00000594661 WDR87Q6ZQQ6 2873 aa13.92□□□□□ -0.18
PNKP-204ENST00000594661 C1orf196B1AJZ1 125 aa13.92□□□□□ -0.18
PNKP-204ENST00000594661 NPIPB9F8W1W9 429 aa13.92□□□□□ -0.18
PNKP-204ENST00000594661 GUSBP08236 651 aa13.92□□□□□ -0.18
PNKP-204ENST00000594661 SLC37A1P57057 533 aa13.92□□□□□ -0.18
PNKP-204ENST00000594661 BIKQ13323 160 aa13.92□□□□□ -0.18
PNKP-204ENST00000594661 TMEM44Q2T9K0 475 aa13.92□□□□□ -0.18
PNKP-204ENST00000594661 SFRP4Q6FHJ7 346 aaPredicted RBP13.92□□□□□ -0.18
PNKP-204ENST00000594661 C3orf33Q6P1S2 294 aa13.92□□□□□ -0.18
PNKP-204ENST00000594661 BBS1Q8NFJ9 593 aa13.92□□□□□ -0.18
PNKP-204ENST00000594661 OR52L1Q8NGH7 329 aa13.92□□□□□ -0.18
PNKP-204ENST00000594661 BRIX1Q8TDN6 353 aaKnown RBP13.92□□□□□ -0.18
PNKP-204ENST00000594661 SLC39A7Q92504 469 aa13.92□□□□□ -0.18
PNKP-204ENST00000594661 ZNF559Q9BR84 538 aa13.92□□□□□ -0.18
PNKP-204ENST00000594661 EDEM2Q9BV94 578 aa13.92□□□□□ -0.18
PNKP-204ENST00000594661 DNAJB12Q9NXW2 375 aaKnown RBP13.92□□□□□ -0.18
PNKP-204ENST00000594661 OR10H1Q9Y4A9 318 aa13.92□□□□□ -0.18
PNKP-204ENST00000594661 A0A0C4DFX4 3053 aa13.92□□□□□ -0.18
PNKP-204ENST00000594661 IGHV5-10-1A0A0J9YXX1 117 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 IMPA2O14732 288 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 ZGLP1P0C6A0 271 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 GDNFP39905 211 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 NPBWR1P48145 328 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 POU3F4P49335 361 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 FOXL2P58012 376 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 GMFBP60983 142 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 YOD1Q5VVQ6 348 aaPredicted RBP13.91□□□□□ -0.18
PNKP-204ENST00000594661 ZNF613Q6PF04 617 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 SMARCD3Q6STE5 483 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 SSX9Q7RTT3 188 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 LHFPL3Q86UP9 236 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 CDK20Q8IZL9 346 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 OR4F15Q8NGB8 312 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 OR4D9Q8NGE8 314 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 SLC25A28Q96A46 364 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 HS6ST2Q96MM7 605 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 ZFP3Q96NJ6 502 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 ZNF649Q9BS31 505 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 OR8D2Q9GZM6 311 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 H2AFY2Q9P0M6 372 aaPredicted RBP13.91□□□□□ -0.18
PNKP-204ENST00000594661 PRODH2Q9UF12 536 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 MED31Q9Y3C7 131 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 SYNDIG1LA6NDD5 238 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 TIAF1O95411 115 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 DDAH2O95865 285 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 ABOP16442 354 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 BMP7P18075 431 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 BDH1Q02338 343 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 IL10RAQ13651 578 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 ZNF141Q15928 474 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 LPAL2Q16609 132 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 TRIM61Q5EBN2 209 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 H3F3CQ6NXT2 135 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 COX15Q7KZN9 410 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 CPOQ8IVL8 374 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 SLC38A9Q8NBW4 561 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 SLC2A12Q8TD20 617 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 SMAP2Q8WU79 429 aaPredicted RBP13.91□□□□□ -0.18
PNKP-204ENST00000594661 BPIFA2Q96DR5 249 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 PHYHIPLQ96FC7 376 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 CCDC74BQ96LY2 380 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 OR6C1Q96RD1 312 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 G6PC3Q9BUM1 346 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 VN1R1Q9GZP7 353 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 MFFQ9GZY8 342 aa13.91□□□□□ -0.18
PNKP-204ENST00000594661 HINT3Q9NQE9 182 aaKnown RBP13.91□□□□□ -0.18
PNKP-204ENST00000594661 FAM183AA6NL82 134 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 M0R296 226 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 RNF13O43567 381 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 IGKV3-11P04433 115 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 SAGP10523 405 aaPredicted RBP13.9□□□□□ -0.18
PNKP-204ENST00000594661 HTR1FP30939 366 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 ATP6V1E1P36543 226 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 FXYD6P3P58550 94 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 PPIAP62937 165 aaKnown RBP13.9□□□□□ -0.18
PNKP-204ENST00000594661 FABP9Q0Z7S8 132 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 PEA15Q15121 130 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 LIN54Q6MZP7 749 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 CXXC5Q7LFL8 322 aaKnown RBP13.9□□□□□ -0.18
PNKP-204ENST00000594661 DTWD2Q8NBA8 298 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 OR13C2Q8NGS9 318 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 OR4C3Q8NH37 302 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 ZNF721Q8TF20 911 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 TCTEX1D2Q8WW35 142 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 NOX3Q9HBY0 568 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 FLRT3Q9NZU0 649 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 A0A0B4J2E0 115 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 A0A1B0GWA3 101 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 A0A1B0GX12 115 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 SOCS6O14544 535 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 TXNL1O43396 289 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 IGHV2-5P01817 119 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 ZNF44P15621 663 aa13.9□□□□□ -0.18
PNKP-204ENST00000594661 SHC1P29353 583 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms