RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 ATP6V1G3Q96LB4 118 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 C1orf147Q96MC9 270 aaPredicted RBP9.02□□□□□ -0.97
USE1-203ENST00000593597 C1QTNF5Q9BXJ0 243 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 NPHS2Q9NP85 383 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 RIMS3Q9UJD0 308 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 KLHL21Q9UJP4 597 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 SH3GLB1Q9Y371 365 aa9.02□□□□□ -0.97
USE1-203ENST00000593597 A0A0G2JMP0 313 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 A0A0X1KG70 313 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 A0A1W2PRG6 482 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 NPIPB13A6NJU9 1138 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 NPIPB4C9JG80 1138 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 MCIDASD6RGH6 385 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 ANGPT2O15123 496 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 OR5F1O95221 314 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 IGHV2-70P01814 119 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 HIST1H2ABP04908 130 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 ZNF26P17031 533 aaPredicted RBP9.01□□□□□ -0.97
USE1-203ENST00000593597 LAP3P28838 519 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 APLNRP35414 380 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 RBM34P42696 430 aaKnown RBP9.01□□□□□ -0.97
USE1-203ENST00000593597 ERFP50548 548 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 UBA52P62987 128 aaKnown RBP9.01□□□□□ -0.97
USE1-203ENST00000593597 LCN2P80188 198 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 HSF2Q03933 536 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 TOP3AQ13472 1001 aaPredicted RBP9.01□□□□□ -0.97
USE1-203ENST00000593597 MMEL1Q495T6 779 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 AWAT1Q58HT5 328 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 KLF17Q5JT82 389 aaPredicted RBP9.01□□□□□ -0.97
USE1-203ENST00000593597 FAM209AQ5JX71 171 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 DCAF12L2Q5VW00 463 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 ZNF774Q6NX45 483 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 HIST3H2AQ7L7L0 130 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 SLC30A8Q8IWU4 369 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 DEFB108BQ8NET1 73 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 OR4M2Q8NGB6 313 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 OR1J2Q8NGS2 313 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 HIST1H2ACQ93077 130 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 RAB39BQ96DA2 213 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 ZNF583Q96ND8 569 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 OR2H1Q9GZK4 316 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 TXNIPQ9H3M7 391 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 SMURF2Q9HAU4 748 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 MSL2Q9HCI7 577 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 MMP26Q9NRE1 261 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 MAN2C1Q9NTJ4 1040 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 A4GNTQ9UNA3 340 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 HIF3AQ9Y2N7 669 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 DOCK11Q5JSL3 2073 aa9.01□□□□□ -0.97
USE1-203ENST00000593597 TRIM77I1YAP6 450 aa9□□□□□ -0.97
USE1-203ENST00000593597 J3QLI3 93 aa9□□□□□ -0.97
USE1-203ENST00000593597 TPD52L2O43399 206 aaKnown RBP9□□□□□ -0.97
USE1-203ENST00000593597 EDF1O60869 148 aaKnown RBP9□□□□□ -0.97
USE1-203ENST00000593597 ENTPD5O75356 428 aa9□□□□□ -0.97
USE1-203ENST00000593597 PRSS23O95084 383 aa9□□□□□ -0.97
USE1-203ENST00000593597 PTHP01270 115 aa9□□□□□ -0.97
USE1-203ENST00000593597 IGHMP01871 453 aa9□□□□□ -0.97
USE1-203ENST00000593597 CD55P08174 381 aa9□□□□□ -0.97
USE1-203ENST00000593597 DAP3P51398 398 aaKnown RBP9□□□□□ -0.97
USE1-203ENST00000593597 TAS2R41P59536 307 aa9□□□□□ -0.97
USE1-203ENST00000593597 SELENOVP59797 346 aa9□□□□□ -0.97
USE1-203ENST00000593597 PPP1CBP62140 327 aa9□□□□□ -0.97
USE1-203ENST00000593597 PLP2Q04941 152 aa9□□□□□ -0.97
USE1-203ENST00000593597 CD47Q08722 323 aa9□□□□□ -0.97
USE1-203ENST00000593597 PSG7Q13046 419 aa9□□□□□ -0.97
USE1-203ENST00000593597 SGCAQ16586 387 aa9□□□□□ -0.97
USE1-203ENST00000593597 HFEQ30201 348 aa9□□□□□ -0.97
USE1-203ENST00000593597 FAM27BQ5VT28 67 aa9□□□□□ -0.97
USE1-203ENST00000593597 OTPQ5XKR4 325 aa9□□□□□ -0.97
USE1-203ENST00000593597 TSPEARQ8WU66 669 aa9□□□□□ -0.97
USE1-203ENST00000593597 CCL17Q92583 94 aa9□□□□□ -0.97
USE1-203ENST00000593597 TAF15Q92804 592 aaKnown RBP eCLIP9□□□□□ -0.97
USE1-203ENST00000593597 GCDHQ92947 438 aaPredicted RBP9□□□□□ -0.97
USE1-203ENST00000593597 LRRC58Q96CX6 371 aa9□□□□□ -0.97
USE1-203ENST00000593597 ELMOD3Q96FG2 381 aa9□□□□□ -0.97
USE1-203ENST00000593597 ZNF48Q96MX3 618 aaPredicted RBP9□□□□□ -0.97
USE1-203ENST00000593597 SIGLEC11Q96RL6 698 aa9□□□□□ -0.97
USE1-203ENST00000593597 GAL3ST1Q99999 423 aa9□□□□□ -0.97
USE1-203ENST00000593597 RBM4Q9BWF3 364 aaKnown RBP9□□□□□ -0.97
USE1-203ENST00000593597 RABEP2Q9H5N1 569 aa9□□□□□ -0.97
USE1-203ENST00000593597 CCNB1IP1Q9NPC3 277 aa9□□□□□ -0.97
USE1-203ENST00000593597 DECR2Q9NUI1 292 aa9□□□□□ -0.97
USE1-203ENST00000593597 GPR160Q9UJ42 338 aa9□□□□□ -0.97
USE1-203ENST00000593597 PPIAL4AQ9Y536 164 aa9□□□□□ -0.97
USE1-203ENST00000593597 SNX13Q9Y5W8 968 aa9□□□□□ -0.97
USE1-203ENST00000593597 SOX21Q9Y651 276 aaPredicted RBP9□□□□□ -0.97
USE1-203ENST00000593597 TRAV27A0A087WT01 109 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 TRAPPC2LH3BP13 241 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 H7C1C5 153 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 IMPA2O14732 288 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 FFAR1O14842 300 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 CST2P09228 141 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 ANPEPP15144 967 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 DRD4P21917 467 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 GDI2P50395 445 aaKnown RBP8.99□□□□□ -0.97
USE1-203ENST00000593597 RPL27P61353 136 aaKnown RBP8.99□□□□□ -0.97
USE1-203ENST00000593597 LCN6P62502 163 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 TEKQ02763 1124 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 CDK5R2Q13319 367 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 ZNF718Q3SXZ3 478 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms