RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 ISPDA4D126 451 aa13.85□□□□□ -0.19
LIG1-205ENST00000593425 C5orf49A4QMS7 147 aa13.85□□□□□ -0.19
LIG1-205ENST00000593425 TSPAN19P0C672 248 aa13.85□□□□□ -0.19
LIG1-205ENST00000593425 GCH1P30793 250 aa13.85□□□□□ -0.19
LIG1-205ENST00000593425 DAP3P51398 398 aaKnown RBP13.85□□□□□ -0.19
LIG1-205ENST00000593425 UBA52P62987 128 aaKnown RBP13.85□□□□□ -0.19
LIG1-205ENST00000593425 ERVK-25P63136 954 aa13.85□□□□□ -0.19
LIG1-205ENST00000593425 PSG4Q00888 419 aa13.85□□□□□ -0.19
LIG1-205ENST00000593425 NFYCQ13952 458 aa13.85□□□□□ -0.19
LIG1-205ENST00000593425 VMACQ2NL98 169 aa13.85□□□□□ -0.19
LIG1-205ENST00000593425 MBNL2Q5VZF2 373 aaKnown RBP13.85□□□□□ -0.19
LIG1-205ENST00000593425 HDDC2Q7Z4H3 204 aa13.85□□□□□ -0.19
LIG1-205ENST00000593425 KLF14Q8TD94 323 aaPredicted RBP13.85□□□□□ -0.19
LIG1-205ENST00000593425 GEMIN6Q8WXD5 167 aaKnown RBP13.85□□□□□ -0.19
LIG1-205ENST00000593425 SGTBQ96EQ0 304 aa13.85□□□□□ -0.19
LIG1-205ENST00000593425 THOC1Q96FV9 657 aaKnown RBP13.85□□□□□ -0.19
LIG1-205ENST00000593425 KCNN2Q9H2S1 579 aa13.85□□□□□ -0.19
LIG1-205ENST00000593425 DCAF16Q9NXF7 216 aa13.85□□□□□ -0.19
LIG1-205ENST00000593425 UBAP1Q9NZ09 502 aa13.85□□□□□ -0.19
LIG1-205ENST00000593425 PPIAL4AQ9Y536 164 aa13.85□□□□□ -0.19
LIG1-205ENST00000593425 PLSCR5A0PG75 271 aa13.84□□□□□ -0.19
LIG1-205ENST00000593425 KCNAB3O43448 404 aa13.84□□□□□ -0.19
LIG1-205ENST00000593425 PIP5K1CO60331 668 aa13.84□□□□□ -0.19
LIG1-205ENST00000593425 SHOX2O60902 331 aaPredicted RBP13.84□□□□□ -0.19
LIG1-205ENST00000593425 NGFP01138 241 aa13.84□□□□□ -0.19
LIG1-205ENST00000593425 GATA3P23771 443 aa13.84□□□□□ -0.19
LIG1-205ENST00000593425 GDI2P50395 445 aaKnown RBP13.84□□□□□ -0.19
LIG1-205ENST00000593425 TAS2R41P59536 307 aa13.84□□□□□ -0.19
LIG1-205ENST00000593425 CD47Q08722 323 aa13.84□□□□□ -0.19
LIG1-205ENST00000593425 SGCAQ16586 387 aa13.84□□□□□ -0.19
LIG1-205ENST00000593425 INTS11Q5TA45 600 aaKnown RBP13.84□□□□□ -0.19
LIG1-205ENST00000593425 SLC25A47Q6Q0C1 308 aa13.84□□□□□ -0.19
LIG1-205ENST00000593425 CCDC80Q76M96 950 aa13.84□□□□□ -0.19
LIG1-205ENST00000593425 CLDN22Q8N7P3 220 aa13.84□□□□□ -0.19
LIG1-205ENST00000593425 TMEM239Q8WW34 195 aa13.84□□□□□ -0.19
LIG1-205ENST00000593425 DVL3Q92997 716 aaPredicted RBP13.84□□□□□ -0.19
LIG1-205ENST00000593425 WNT5BQ9H1J7 359 aa13.84□□□□□ -0.19
LIG1-205ENST00000593425 SMURF2Q9HAU4 748 aa13.84□□□□□ -0.19
LIG1-205ENST00000593425 EIF3KQ9UBQ5 218 aaKnown RBP13.84□□□□□ -0.19
LIG1-205ENST00000593425 SH3GLB1Q9Y371 365 aa13.84□□□□□ -0.19
LIG1-205ENST00000593425 ADH4P08319 380 aa13.83□□□□□ -0.2
LIG1-205ENST00000593425 ZFP36P26651 326 aaKnown RBP13.83□□□□□ -0.2
LIG1-205ENST00000593425 RBM34P42696 430 aaKnown RBP13.83□□□□□ -0.2
LIG1-205ENST00000593425 PPP1CBP62140 327 aa13.83□□□□□ -0.2
LIG1-205ENST00000593425 TOP3AQ13472 1001 aaPredicted RBP13.83□□□□□ -0.2
LIG1-205ENST00000593425 PIN1Q13526 163 aaPredicted RBP13.83□□□□□ -0.2
LIG1-205ENST00000593425 LAPTM4AQ15012 233 aa13.83□□□□□ -0.2
LIG1-205ENST00000593425 ABHD4Q8TB40 342 aa13.83□□□□□ -0.2
LIG1-205ENST00000593425 RASSF5Q8WWW0 418 aa13.83□□□□□ -0.2
LIG1-205ENST00000593425 LIPHQ8WWY8 451 aa13.83□□□□□ -0.2
LIG1-205ENST00000593425 OR2H1Q9GZK4 316 aa13.83□□□□□ -0.2
LIG1-205ENST00000593425 MSL2Q9HCI7 577 aa13.83□□□□□ -0.2
LIG1-205ENST00000593425 STX18Q9P2W9 335 aaKnown RBP13.83□□□□□ -0.2
LIG1-205ENST00000593425 RIMS3Q9UJD0 308 aa13.83□□□□□ -0.2
LIG1-205ENST00000593425 KLHL21Q9UJP4 597 aa13.83□□□□□ -0.2
LIG1-205ENST00000593425 PCDHGB1Q9Y5G3 927 aa13.83□□□□□ -0.2
LIG1-205ENST00000593425 WNK2Q9Y3S1 2297 aa13.83□□□□□ -0.2
LIG1-205ENST00000593425 NPIPB13A6NJU9 1138 aa13.82□□□□□ -0.2
LIG1-205ENST00000593425 NPIPB4C9JG80 1138 aa13.82□□□□□ -0.2
LIG1-205ENST00000593425 OR5F1O95221 314 aa13.82□□□□□ -0.2
LIG1-205ENST00000593425 IGF2P01344 180 aa13.82□□□□□ -0.2
LIG1-205ENST00000593425 LAP3P28838 519 aa13.82□□□□□ -0.2
LIG1-205ENST00000593425 SLC3A1Q07837 685 aa13.82□□□□□ -0.2
LIG1-205ENST00000593425 TUSC1Q2TAM9 212 aa13.82□□□□□ -0.2
LIG1-205ENST00000593425 RABL3Q5HYI8 236 aa13.82□□□□□ -0.2
LIG1-205ENST00000593425 FAM27BQ5VT28 67 aa13.82□□□□□ -0.2
LIG1-205ENST00000593425 SIGLECL1Q8N7X8 197 aa13.82□□□□□ -0.2
LIG1-205ENST00000593425 DEFB108BQ8NET1 73 aa13.82□□□□□ -0.2
LIG1-205ENST00000593425 ST7LQ8TDW4 575 aa13.82□□□□□ -0.2
LIG1-205ENST00000593425 DYDC1Q8WWB3 177 aa13.82□□□□□ -0.2
LIG1-205ENST00000593425 STON2Q8WXE9 905 aa13.82□□□□□ -0.2
LIG1-205ENST00000593425 C1QTNF5Q9BXJ0 243 aa13.82□□□□□ -0.2
LIG1-205ENST00000593425 EGLN1Q9GZT9 426 aa13.82□□□□□ -0.2
LIG1-205ENST00000593425 TXNIPQ9H3M7 391 aa13.82□□□□□ -0.2
LIG1-205ENST00000593425 NPHS2Q9NP85 383 aa13.82□□□□□ -0.2
LIG1-205ENST00000593425 MMP26Q9NRE1 261 aa13.82□□□□□ -0.2
LIG1-205ENST00000593425 CYSLTR2Q9NS75 346 aa13.82□□□□□ -0.2
LIG1-205ENST00000593425 DDX28Q9NUL7 540 aaKnown RBP13.82□□□□□ -0.2
LIG1-205ENST00000593425 NPTNQ9Y639 398 aa13.82□□□□□ -0.2
LIG1-205ENST00000593425 FBP2O00757 339 aa13.81□□□□□ -0.2
LIG1-205ENST00000593425 ICMTO60725 284 aa13.81□□□□□ -0.2
LIG1-205ENST00000593425 IGHV2-70P01814 119 aa13.81□□□□□ -0.2
LIG1-205ENST00000593425 CD55P08174 381 aa13.81□□□□□ -0.2
LIG1-205ENST00000593425 VIMP08670 466 aaKnown RBP13.81□□□□□ -0.2
LIG1-205ENST00000593425 FPR2P25090 351 aa13.81□□□□□ -0.2
LIG1-205ENST00000593425 OR1E2P47887 323 aa13.81□□□□□ -0.2
LIG1-205ENST00000593425 SEC61A1P61619 476 aaKnown RBP13.81□□□□□ -0.2
LIG1-205ENST00000593425 ALG10Q5BKT4 473 aa13.81□□□□□ -0.2
LIG1-205ENST00000593425 TTMPQ5BVD1 217 aa13.81□□□□□ -0.2
LIG1-205ENST00000593425 NANOGP8Q6NSW7 305 aa13.81□□□□□ -0.2
LIG1-205ENST00000593425 ZNF774Q6NX45 483 aa13.81□□□□□ -0.2
LIG1-205ENST00000593425 UNQ6126/PRO20091Q6UXV3 157 aa13.81□□□□□ -0.2
LIG1-205ENST00000593425 FOXL2NBQ6ZUU3 175 aa13.81□□□□□ -0.2
LIG1-205ENST00000593425 IGFN1Q86VF2 1251 aa13.81□□□□□ -0.2
LIG1-205ENST00000593425 CALHM3Q86XJ0 350 aa13.81□□□□□ -0.2
LIG1-205ENST00000593425 TSPEARQ8WU66 669 aa13.81□□□□□ -0.2
LIG1-205ENST00000593425 DCLRE1CQ96SD1 692 aaKnown RBP13.81□□□□□ -0.2
LIG1-205ENST00000593425 ALG12Q9BV10 488 aa13.81□□□□□ -0.2
LIG1-205ENST00000593425 POFUT1Q9H488 388 aa13.81□□□□□ -0.2
LIG1-205ENST00000593425 NTN4Q9HB63 628 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms