RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 ZFP36P26651 326 aaKnown RBP14.79□□□□□ -0.04
RETREG3-212ENST00000593251 GDI2P50395 445 aaKnown RBP14.79□□□□□ -0.04
RETREG3-212ENST00000593251 ZNF133P52736 654 aaPredicted RBP14.79□□□□□ -0.04
RETREG3-212ENST00000593251 CRYBA2P53672 197 aa14.79□□□□□ -0.04
RETREG3-212ENST00000593251 ERVK-25P63136 954 aa14.79□□□□□ -0.04
RETREG3-212ENST00000593251 MRPS34P82930 218 aaKnown RBP14.79□□□□□ -0.04
RETREG3-212ENST00000593251 PSG4Q00888 419 aa14.79□□□□□ -0.04
RETREG3-212ENST00000593251 PATL1Q86TB9 770 aaKnown RBP14.79□□□□□ -0.04
RETREG3-212ENST00000593251 SIGLECL1Q8N7X8 197 aa14.79□□□□□ -0.04
RETREG3-212ENST00000593251 ABHD4Q8TB40 342 aa14.79□□□□□ -0.04
RETREG3-212ENST00000593251 KLF14Q8TD94 323 aaPredicted RBP14.79□□□□□ -0.04
RETREG3-212ENST00000593251 ST7LQ8TDW4 575 aa14.79□□□□□ -0.04
RETREG3-212ENST00000593251 HDAC2Q92769 488 aaKnown RBP14.79□□□□□ -0.04
RETREG3-212ENST00000593251 DVL3Q92997 716 aaPredicted RBP14.79□□□□□ -0.04
RETREG3-212ENST00000593251 PCDHAC1Q9H158 963 aa14.79□□□□□ -0.04
RETREG3-212ENST00000593251 NANOGQ9H9S0 305 aa14.79□□□□□ -0.04
RETREG3-212ENST00000593251 DDX28Q9NUL7 540 aaKnown RBP14.79□□□□□ -0.04
RETREG3-212ENST00000593251 EIF3KQ9UBQ5 218 aaKnown RBP14.79□□□□□ -0.04
RETREG3-212ENST00000593251 NDUFAF1Q9Y375 327 aa14.79□□□□□ -0.04
RETREG3-212ENST00000593251 TMPRSS2O15393 492 aa14.78□□□□□ -0.04
RETREG3-212ENST00000593251 SHOX2O60902 331 aaPredicted RBP14.78□□□□□ -0.04
RETREG3-212ENST00000593251 NGFP01138 241 aa14.78□□□□□ -0.04
RETREG3-212ENST00000593251 PCGF2P35227 344 aa14.78□□□□□ -0.04
RETREG3-212ENST00000593251 DAP3P51398 398 aaKnown RBP14.78□□□□□ -0.04
RETREG3-212ENST00000593251 CD47Q08722 323 aa14.78□□□□□ -0.04
RETREG3-212ENST00000593251 ARMC4Q5T2S8 1044 aa14.78□□□□□ -0.04
RETREG3-212ENST00000593251 HDDC2Q7Z4H3 204 aa14.78□□□□□ -0.04
RETREG3-212ENST00000593251 OR10A6Q8NH74 314 aa14.78□□□□□ -0.04
RETREG3-212ENST00000593251 NMD3Q96D46 503 aaKnown RBP14.78□□□□□ -0.04
RETREG3-212ENST00000593251 SGTBQ96EQ0 304 aa14.78□□□□□ -0.04
RETREG3-212ENST00000593251 THOC1Q96FV9 657 aaKnown RBP14.78□□□□□ -0.04
RETREG3-212ENST00000593251 DCLRE1CQ96SD1 692 aaKnown RBP14.78□□□□□ -0.04
RETREG3-212ENST00000593251 EGLN1Q9GZT9 426 aa14.78□□□□□ -0.04
RETREG3-212ENST00000593251 KAT8Q9H7Z6 458 aaKnown RBP14.78□□□□□ -0.04
RETREG3-212ENST00000593251 MSL2Q9HCI7 577 aa14.78□□□□□ -0.04
RETREG3-212ENST00000593251 MMP26Q9NRE1 261 aa14.78□□□□□ -0.04
RETREG3-212ENST00000593251 SH3GLB1Q9Y371 365 aa14.78□□□□□ -0.04
RETREG3-212ENST00000593251 CENPBD1B2RD01 187 aa14.77□□□□□ -0.05
RETREG3-212ENST00000593251 ANGPT2O15123 496 aa14.77□□□□□ -0.05
RETREG3-212ENST00000593251 SBK2P0C263 348 aa14.77□□□□□ -0.05
RETREG3-212ENST00000593251 HKR1P10072 659 aa14.77□□□□□ -0.05
RETREG3-212ENST00000593251 PPP1CBP62140 327 aa14.77□□□□□ -0.05
RETREG3-212ENST00000593251 TOP3AQ13472 1001 aaPredicted RBP14.77□□□□□ -0.05
RETREG3-212ENST00000593251 NFYCQ13952 458 aa14.77□□□□□ -0.05
RETREG3-212ENST00000593251 LAPTM4AQ15012 233 aa14.77□□□□□ -0.05
RETREG3-212ENST00000593251 MBNL2Q5VZF2 373 aaKnown RBP14.77□□□□□ -0.05
RETREG3-212ENST00000593251 TREML1Q86YW5 311 aa14.77□□□□□ -0.05
RETREG3-212ENST00000593251 DPP10Q8N608 796 aa14.77□□□□□ -0.05
RETREG3-212ENST00000593251 CLDN22Q8N7P3 220 aa14.77□□□□□ -0.05
RETREG3-212ENST00000593251 ZNF747Q9BV97 191 aa14.77□□□□□ -0.05
RETREG3-212ENST00000593251 WNT5BQ9H1J7 359 aa14.77□□□□□ -0.05
RETREG3-212ENST00000593251 NTN4Q9HB63 628 aa14.77□□□□□ -0.05
RETREG3-212ENST00000593251 NPHS2Q9NP85 383 aa14.77□□□□□ -0.05
RETREG3-212ENST00000593251 ZNF69Q9UC07 566 aa14.77□□□□□ -0.05
RETREG3-212ENST00000593251 NPTNQ9Y639 398 aa14.77□□□□□ -0.05
RETREG3-212ENST00000593251 PIP5K1CO60331 668 aa14.76□□□□□ -0.05
RETREG3-212ENST00000593251 LAP3P28838 519 aa14.76□□□□□ -0.05
RETREG3-212ENST00000593251 TAS2R41P59536 307 aa14.76□□□□□ -0.05
RETREG3-212ENST00000593251 SEC61A1P61619 476 aaKnown RBP14.76□□□□□ -0.05
RETREG3-212ENST00000593251 SLC3A1Q07837 685 aa14.76□□□□□ -0.05
RETREG3-212ENST00000593251 FOXL1Q12952 345 aa14.76□□□□□ -0.05
RETREG3-212ENST00000593251 ARMCX4Q5H9R4 360 aa14.76□□□□□ -0.05
RETREG3-212ENST00000593251 PRR31Q5SQ13 230 aa14.76□□□□□ -0.05
RETREG3-212ENST00000593251 SLC25A47Q6Q0C1 308 aa14.76□□□□□ -0.05
RETREG3-212ENST00000593251 RBMS3Q6XE24 437 aaKnown RBP14.76□□□□□ -0.05
RETREG3-212ENST00000593251 SLC30A8Q8IWU4 369 aa14.76□□□□□ -0.05
RETREG3-212ENST00000593251 BCL6BQ8N143 479 aaPredicted RBP14.76□□□□□ -0.05
RETREG3-212ENST00000593251 DEFB108BQ8NET1 73 aa14.76□□□□□ -0.05
RETREG3-212ENST00000593251 TMEM239Q8WW34 195 aa14.76□□□□□ -0.05
RETREG3-212ENST00000593251 OR2H1Q9GZK4 316 aa14.76□□□□□ -0.05
RETREG3-212ENST00000593251 RABEP2Q9H5N1 569 aa14.76□□□□□ -0.05
RETREG3-212ENST00000593251 CYSLTR2Q9NS75 346 aa14.76□□□□□ -0.05
RETREG3-212ENST00000593251 EGFL7Q9UHF1 273 aa14.76□□□□□ -0.05
RETREG3-212ENST00000593251 KLHL21Q9UJP4 597 aa14.76□□□□□ -0.05
RETREG3-212ENST00000593251 TRRAPQ9Y4A5 3859 aa14.75□□□□□ -0.05
RETREG3-212ENST00000593251 DNAJC9-AS1A6NH13 148 aa14.75□□□□□ -0.05
RETREG3-212ENST00000593251 TRAPPC2LH3BP13 241 aa14.75□□□□□ -0.05
RETREG3-212ENST00000593251 FOXH1O75593 365 aa14.75□□□□□ -0.05
RETREG3-212ENST00000593251 IGHV2-70P01814 119 aa14.75□□□□□ -0.05
RETREG3-212ENST00000593251 ADH4P08319 380 aa14.75□□□□□ -0.05
RETREG3-212ENST00000593251 GZMMP51124 257 aa14.75□□□□□ -0.05
RETREG3-212ENST00000593251 TNFAIP6P98066 277 aaPredicted RBP14.75□□□□□ -0.05
RETREG3-212ENST00000593251 PIN1Q13526 163 aaPredicted RBP14.75□□□□□ -0.05
RETREG3-212ENST00000593251 VMACQ2NL98 169 aa14.75□□□□□ -0.05
RETREG3-212ENST00000593251 KLF17Q5JT82 389 aaPredicted RBP14.75□□□□□ -0.05
RETREG3-212ENST00000593251 INTS11Q5TA45 600 aaKnown RBP14.75□□□□□ -0.05
RETREG3-212ENST00000593251 ZNF774Q6NX45 483 aa14.75□□□□□ -0.05
RETREG3-212ENST00000593251 SHISA2Q6UWI4 295 aa14.75□□□□□ -0.05
RETREG3-212ENST00000593251 UNQ6126/PRO20091Q6UXV3 157 aa14.75□□□□□ -0.05
RETREG3-212ENST00000593251 TAF15Q92804 592 aaKnown RBP eCLIP14.75□□□□□ -0.05
RETREG3-212ENST00000593251 LRRC58Q96CX6 371 aa14.75□□□□□ -0.05
RETREG3-212ENST00000593251 TXNIPQ9H3M7 391 aa14.75□□□□□ -0.05
RETREG3-212ENST00000593251 SMURF2Q9HAU4 748 aa14.75□□□□□ -0.05
RETREG3-212ENST00000593251 RIMS3Q9UJD0 308 aa14.75□□□□□ -0.05
RETREG3-212ENST00000593251 PURGQ9UJV8 347 aaKnown RBP14.75□□□□□ -0.05
RETREG3-212ENST00000593251 ZDHHC8Q9ULC8 765 aa14.75□□□□□ -0.05
RETREG3-212ENST00000593251 TIMM8AO60220 97 aaPredicted RBP14.74□□□□□ -0.05
RETREG3-212ENST00000593251 CD55P08174 381 aa14.74□□□□□ -0.05
RETREG3-212ENST00000593251 VIMP08670 466 aaKnown RBP14.74□□□□□ -0.05
RETREG3-212ENST00000593251 TSPAN19P0C672 248 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms