RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 OR2A2Q6IF42 318 aa11.53□□□□□ -0.56
PTBP1-216ENST00000590887 DPY19L4Q7Z388 723 aa11.53□□□□□ -0.56
PTBP1-216ENST00000590887 ZNF679Q8IYX0 411 aa11.53□□□□□ -0.56
PTBP1-216ENST00000590887 RBMXL3Q8N7X1 1067 aaKnown RBP11.53□□□□□ -0.56
PTBP1-216ENST00000590887 SLC26A10Q8NG04 563 aa11.53□□□□□ -0.56
PTBP1-216ENST00000590887 CPT1CQ8TCG5 803 aa11.53□□□□□ -0.56
PTBP1-216ENST00000590887 SLC39A7Q92504 469 aa11.53□□□□□ -0.56
PTBP1-216ENST00000590887 ZNF845Q96IR2 970 aaPredicted RBP11.53□□□□□ -0.56
PTBP1-216ENST00000590887 ZNF385AQ96PM9 386 aaKnown RBP11.53□□□□□ -0.56
PTBP1-216ENST00000590887 TSC22D3Q99576 134 aa11.53□□□□□ -0.56
PTBP1-216ENST00000590887 ZNF649Q9BS31 505 aa11.53□□□□□ -0.56
PTBP1-216ENST00000590887 RBM24Q9BX46 236 aaKnown RBP11.53□□□□□ -0.56
PTBP1-216ENST00000590887 C1orf198Q9H425 327 aa11.53□□□□□ -0.56
PTBP1-216ENST00000590887 NIPAL2Q9H841 368 aa11.53□□□□□ -0.56
PTBP1-216ENST00000590887 EXOSC4Q9NPD3 245 aaKnown RBP11.53□□□□□ -0.56
PTBP1-216ENST00000590887 NBEAQ8NFP9 2946 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 H0YC42 278 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 PLPP2O43688 288 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 RAMP1O60894 148 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 FARS2O95363 451 aaKnown RBP11.52□□□□□ -0.57
PTBP1-216ENST00000590887 APOC1P02654 83 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 CELP19835 753 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 MSR1P21757 451 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 GADD45AP24522 165 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 SOX6P35712 828 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 TGFBR2P37173 567 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 RIDAP52758 137 aaKnown RBP11.52□□□□□ -0.57
PTBP1-216ENST00000590887 OR12D2P58182 307 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 PMP22Q01453 160 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 ETFDHQ16134 617 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 PCK2Q16822 640 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 DGUOKQ16854 277 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 NRN1LQ496H8 165 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 RNFT1Q5M7Z0 435 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 C19orf48Q6RUI8 117 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 KLHL24Q6TFL4 600 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 TMEM123Q8N131 208 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 ZIC4Q8N9L1 334 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 ZNF485Q8NCK3 441 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 ZNRF4Q8WWF5 429 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 C11orf40Q8WZ69 217 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 PHYHIPQ92561 330 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 OR8B4Q96RC9 309 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 SLCO5A1Q9H2Y9 848 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 NELFAQ9H3P2 528 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 CALHM2Q9HA72 323 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 PLSCR2Q9NRY7 297 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 UPB1Q9UBR1 384 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 ZMIZ1Q9ULJ6 1067 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 RAXQ9Y2V3 346 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 LIPGQ9Y5X9 500 aa11.52□□□□□ -0.57
PTBP1-216ENST00000590887 TNRC6AQ8NDV7 1962 aaKnown RBP11.51□□□□□ -0.57
PTBP1-216ENST00000590887 TRBV2A0A0J9YWF9 115 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 LOC100506127A0A0U1RQW1 187 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 TRDV1A0A1B0GX56 115 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 OGG1O15527 345 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 ADRA2AP08913 450 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 GAAP10253 952 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 EDNRAP25101 427 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 DCTDP32321 178 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 SELENOPP49908 381 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 PCBD1P61457 104 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 MRPS34P82930 218 aaKnown RBP11.51□□□□□ -0.57
PTBP1-216ENST00000590887 ROM1Q03395 351 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 FMODQ06828 376 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 TAF13Q15543 124 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 SGCAQ16586 387 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 CTF1Q16619 201 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 EIF2S3LQ2VIR3 472 aaKnown RBP11.51□□□□□ -0.57
PTBP1-216ENST00000590887 PLEKHN1Q494U1 663 aaPredicted RBP11.51□□□□□ -0.57
PTBP1-216ENST00000590887 TP53I3Q53FA7 332 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 ZNF100Q8IYN0 542 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 GJC3Q8NFK1 279 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 OR52N5Q8NH56 324 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 EXTL1Q92935 676 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 APH1AQ96BI3 265 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 GMPPAQ96IJ6 420 aaPredicted RBP11.51□□□□□ -0.57
PTBP1-216ENST00000590887 KCTD7Q96MP8 289 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 GPR137Q96N19 417 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 TM9SF2Q99805 663 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 CHCHD6Q9BRQ6 235 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 COMMD4Q9H0A8 199 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 ISG20L2Q9H9L3 353 aaKnown RBP11.51□□□□□ -0.57
PTBP1-216ENST00000590887 POLE4Q9NR33 117 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 MRPL22Q9NWU5 206 aaKnown RBP11.51□□□□□ -0.57
PTBP1-216ENST00000590887 SPRR3Q9UBC9 169 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 FOXD3Q9UJU5 478 aaPredicted RBP11.51□□□□□ -0.57
PTBP1-216ENST00000590887 COPS3Q9UNS2 423 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 TP53TG5Q9Y2B4 290 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 EMC9Q9Y3B6 208 aa11.51□□□□□ -0.57
PTBP1-216ENST00000590887 SMG1Q96Q15 3661 aaKnown RBP11.5□□□□□ -0.57
PTBP1-216ENST00000590887 ZNF587BE7ETH6 402 aa11.5□□□□□ -0.57
PTBP1-216ENST00000590887 TAF4O00268 1085 aa11.5□□□□□ -0.57
PTBP1-216ENST00000590887 WDR1O75083 606 aa11.5□□□□□ -0.57
PTBP1-216ENST00000590887 RGS9O75916 674 aaPredicted RBP11.5□□□□□ -0.57
PTBP1-216ENST00000590887 H2BFMP0C1H6 154 aa11.5□□□□□ -0.57
PTBP1-216ENST00000590887 FGF9P31371 208 aaPredicted RBP11.5□□□□□ -0.57
PTBP1-216ENST00000590887 HCCSP53701 268 aa11.5□□□□□ -0.57
PTBP1-216ENST00000590887 NFATC3Q12968 1075 aa11.5□□□□□ -0.57
PTBP1-216ENST00000590887 SSX1Q16384 188 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms