RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 NINJ1Q92982 152 aa18.52■□□□□ 0.56
ATG4D-212ENST00000590096 SRA1Q9HD15 236 aaKnown RBP18.52■□□□□ 0.56
ATG4D-212ENST00000590096 POLE4Q9NR33 117 aa18.52■□□□□ 0.56
ATG4D-212ENST00000590096 CISD1Q9NZ45 108 aaKnown RBP18.52■□□□□ 0.56
ATG4D-212ENST00000590096 MOKQ9UQ07 419 aa18.52■□□□□ 0.56
ATG4D-212ENST00000590096 COA3Q9Y2R0 106 aaPredicted RBP18.52■□□□□ 0.56
ATG4D-212ENST00000590096 ATP23Q9Y6H3 246 aa18.52■□□□□ 0.56
ATG4D-212ENST00000590096 ATP6V1G2-DDX39BF2Z307 99 aa18.51■□□□□ 0.55
ATG4D-212ENST00000590096 CST2P09228 141 aa18.51■□□□□ 0.55
ATG4D-212ENST00000590096 DAPP51397 102 aa18.51■□□□□ 0.55
ATG4D-212ENST00000590096 HSF2Q03933 536 aa18.51■□□□□ 0.55
ATG4D-212ENST00000590096 RAB39AQ14964 217 aa18.51■□□□□ 0.55
ATG4D-212ENST00000590096 SLC27A4Q6P1M0 643 aa18.51■□□□□ 0.55
ATG4D-212ENST00000590096 ZNF611Q8N823 705 aa18.51■□□□□ 0.55
ATG4D-212ENST00000590096 NPEPL1Q8NDH3 523 aa18.51■□□□□ 0.55
ATG4D-212ENST00000590096 ICA1LQ8NDH6 482 aa18.51■□□□□ 0.55
ATG4D-212ENST00000590096 FOXN4Q96NZ1 517 aa18.51■□□□□ 0.55
ATG4D-212ENST00000590096 TSSK2Q96PF2 358 aa18.51■□□□□ 0.55
ATG4D-212ENST00000590096 GABARAPL1Q9H0R8 117 aa18.51■□□□□ 0.55
ATG4D-212ENST00000590096 B9D1Q9UPM9 204 aa18.51■□□□□ 0.55
ATG4D-212ENST00000590096 RAI1Q7Z5J4 1906 aaPredicted RBP18.51■□□□□ 0.55
ATG4D-212ENST00000590096 OR6C68A6NDL8 312 aa18.5■□□□□ 0.55
ATG4D-212ENST00000590096 RIIAD1A6NNX1 92 aa18.5■□□□□ 0.55
ATG4D-212ENST00000590096 H3BNX3 289 aa18.5■□□□□ 0.55
ATG4D-212ENST00000590096 PTHP01270 115 aa18.5■□□□□ 0.55
ATG4D-212ENST00000590096 ZNF14P17017 642 aaPredicted RBP18.5■□□□□ 0.55
ATG4D-212ENST00000590096 ZNF3P17036 446 aa18.5■□□□□ 0.55
ATG4D-212ENST00000590096 GRK5P34947 590 aa18.5■□□□□ 0.55
ATG4D-212ENST00000590096 PCBD1P61457 104 aa18.5■□□□□ 0.55
ATG4D-212ENST00000590096 PLP2Q04941 152 aa18.5■□□□□ 0.55
ATG4D-212ENST00000590096 MYPOPQ86VE0 399 aaPredicted RBP18.5■□□□□ 0.55
ATG4D-212ENST00000590096 IQCF1Q8N6M8 205 aa18.5■□□□□ 0.55
ATG4D-212ENST00000590096 MS4A3Q96HJ5 214 aa18.5■□□□□ 0.55
ATG4D-212ENST00000590096 ZNF75AQ96N20 296 aa18.5■□□□□ 0.55
ATG4D-212ENST00000590096 CCL19Q99731 98 aa18.5■□□□□ 0.55
ATG4D-212ENST00000590096 PKP2Q99959 881 aa18.5■□□□□ 0.55
ATG4D-212ENST00000590096 TEX12Q9BXU0 123 aa18.5■□□□□ 0.55
ATG4D-212ENST00000590096 RACGAP1Q9H0H5 632 aa18.5■□□□□ 0.55
ATG4D-212ENST00000590096 C1orf198Q9H425 327 aa18.5■□□□□ 0.55
ATG4D-212ENST00000590096 FN3KQ9H479 309 aa18.5■□□□□ 0.55
ATG4D-212ENST00000590096 KRT84Q9NSB2 600 aa18.5■□□□□ 0.55
ATG4D-212ENST00000590096 FAIMQ9NVQ4 179 aa18.5■□□□□ 0.55
ATG4D-212ENST00000590096 OAZ3Q9UMX2 235 aa18.5■□□□□ 0.55
ATG4D-212ENST00000590096 FKBP7Q9Y680 259 aa18.5■□□□□ 0.55
ATG4D-212ENST00000590096 IGHV2OR16-5A0A0B4J2B6 119 aa18.49■□□□□ 0.55
ATG4D-212ENST00000590096 IQCMA0A1B0GVH7 501 aa18.49■□□□□ 0.55
ATG4D-212ENST00000590096 SAC3D1A6NKF1 404 aa18.49■□□□□ 0.55
ATG4D-212ENST00000590096 C12orf71A8MTZ7 269 aa18.49■□□□□ 0.55
ATG4D-212ENST00000590096 DCTN6O00399 190 aa18.49■□□□□ 0.55
ATG4D-212ENST00000590096 ATE1O95260 518 aa18.49■□□□□ 0.55
ATG4D-212ENST00000590096 SERPINA5P05154 406 aa18.49■□□□□ 0.55
ATG4D-212ENST00000590096 MMP7P09237 267 aaPredicted RBP18.49■□□□□ 0.55
ATG4D-212ENST00000590096 ZNF32P17041 273 aa18.49■□□□□ 0.55
ATG4D-212ENST00000590096 GLO1Q04760 184 aa18.49■□□□□ 0.55
ATG4D-212ENST00000590096 GINS1Q14691 196 aa18.49■□□□□ 0.55
ATG4D-212ENST00000590096 OR6V1Q8N148 313 aa18.49■□□□□ 0.55
ATG4D-212ENST00000590096 PARP8Q8N3A8 854 aa18.49■□□□□ 0.55
ATG4D-212ENST00000590096 CYB561A3Q8NBI2 242 aa18.49■□□□□ 0.55
ATG4D-212ENST00000590096 SLC37A3Q8NCC5 494 aa18.49■□□□□ 0.55
ATG4D-212ENST00000590096 OR4F15Q8NGB8 312 aa18.49■□□□□ 0.55
ATG4D-212ENST00000590096 STMN2Q93045 179 aa18.49■□□□□ 0.55
ATG4D-212ENST00000590096 FBXO17Q96EF6 278 aa18.49■□□□□ 0.55
ATG4D-212ENST00000590096 WACQ9BTA9 647 aa18.49■□□□□ 0.55
ATG4D-212ENST00000590096 ZNF416Q9BWM5 594 aa18.49■□□□□ 0.55
ATG4D-212ENST00000590096 S100A14Q9HCY8 104 aa18.49■□□□□ 0.55
ATG4D-212ENST00000590096 EMC7Q9NPA0 242 aa18.49■□□□□ 0.55
ATG4D-212ENST00000590096 IGLV1-36A0A0B4J1U3 117 aa18.48■□□□□ 0.55
ATG4D-212ENST00000590096 HMGN1P05114 100 aa18.48■□□□□ 0.55
ATG4D-212ENST00000590096 SCG5P05408 212 aa18.48■□□□□ 0.55
ATG4D-212ENST00000590096 CALCRP30988 508 aa18.48■□□□□ 0.55
ATG4D-212ENST00000590096 ENDOGQ14249 297 aaKnown RBP18.48■□□□□ 0.55
ATG4D-212ENST00000590096 PABPC1L2AQ5JQF8 200 aa18.48■□□□□ 0.55
ATG4D-212ENST00000590096 SYT9Q86SS6 491 aa18.48■□□□□ 0.55
ATG4D-212ENST00000590096 ZBTB46Q86UZ6 589 aa18.48■□□□□ 0.55
ATG4D-212ENST00000590096 PROKR2Q8NFJ6 384 aa18.48■□□□□ 0.55
ATG4D-212ENST00000590096 OR2T4Q8NH00 348 aa18.48■□□□□ 0.55
ATG4D-212ENST00000590096 SMAP2Q8WU79 429 aaPredicted RBP18.48■□□□□ 0.55
ATG4D-212ENST00000590096 PIGTQ969N2 578 aa18.48■□□□□ 0.55
ATG4D-212ENST00000590096 CMC2Q9NRP2 79 aa18.48■□□□□ 0.55
ATG4D-212ENST00000590096 ENOPH1Q9UHY7 261 aa18.48■□□□□ 0.55
ATG4D-212ENST00000590096 POLR1DQ9Y2S0 133 aa18.48■□□□□ 0.55
ATG4D-212ENST00000590096 TIMM10BQ9Y5J6 103 aa18.48■□□□□ 0.55
ATG4D-212ENST00000590096 DSCAMO60469 2012 aa18.48■□□□□ 0.55
ATG4D-212ENST00000590096 PLCE1Q9P212 2302 aa18.48■□□□□ 0.55
ATG4D-212ENST00000590096 OTOGQ6ZRI0 2925 aa18.47■□□□□ 0.55
ATG4D-212ENST00000590096 PDZD2O15018 2839 aa18.47■□□□□ 0.55
ATG4D-212ENST00000590096 CSMD2Q7Z408 3487 aa18.47■□□□□ 0.55
ATG4D-212ENST00000590096 E7EQL1 145 aa18.47■□□□□ 0.55
ATG4D-212ENST00000590096 HLA-DQA2P01906 255 aa18.47■□□□□ 0.55
ATG4D-212ENST00000590096 CD53P19397 219 aa18.47■□□□□ 0.55
ATG4D-212ENST00000590096 APLNRP35414 380 aa18.47■□□□□ 0.55
ATG4D-212ENST00000590096 CRISP1P54107 249 aa18.47■□□□□ 0.55
ATG4D-212ENST00000590096 LSM6P62312 80 aaKnown RBP18.47■□□□□ 0.55
ATG4D-212ENST00000590096 ESRRGP62508 458 aa18.47■□□□□ 0.55
ATG4D-212ENST00000590096 GALK2Q01415 458 aa18.47■□□□□ 0.55
ATG4D-212ENST00000590096 CRMP1Q14194 572 aa18.47■□□□□ 0.55
ATG4D-212ENST00000590096 ZNF362Q5T0B9 420 aaPredicted RBP18.47■□□□□ 0.55
ATG4D-212ENST00000590096 KDM4DQ6B0I6 523 aa18.47■□□□□ 0.55
ATG4D-212ENST00000590096 UGT2A3Q6UWM9 527 aa18.47■□□□□ 0.55
ATG4D-212ENST00000590096 B3GLCTQ6Y288 498 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms