RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 TTTY10Q9BZA0 68 aa10.73□□□□□ -0.69
CCBE1-203ENST00000589116 SLIRPQ9GZT3 109 aaKnown RBP10.73□□□□□ -0.69
CCBE1-203ENST00000589116 SLC6A15Q9H2J7 730 aa10.73□□□□□ -0.69
CCBE1-203ENST00000589116 KCNN2Q9H2S1 579 aa10.73□□□□□ -0.69
CCBE1-203ENST00000589116 ZDHHC11Q9H8X9 412 aa10.73□□□□□ -0.69
CCBE1-203ENST00000589116 KCNG2Q9UJ96 466 aa10.73□□□□□ -0.69
CCBE1-203ENST00000589116 KLHDC2Q9Y2U9 406 aa10.73□□□□□ -0.69
CCBE1-203ENST00000589116 SIRT4Q9Y6E7 314 aaPredicted RBP10.73□□□□□ -0.69
CCBE1-203ENST00000589116 IGKV1D-43A0A0B4J1Z2 117 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 ZNF716A6NP11 495 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 PYCARD-AS1I3L0S3 204 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 GABRPO00591 440 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 CYTIPO60759 359 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 RGS9O75916 674 aaPredicted RBP10.72□□□□□ -0.69
CCBE1-203ENST00000589116 ABHD16AO95870 558 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 GPANK1O95872 356 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 SPARCP09486 303 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 LAP3P28838 519 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 SOX6P35712 828 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 CSNK1A1P48729 337 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 ZNF133P52736 654 aaPredicted RBP10.72□□□□□ -0.69
CCBE1-203ENST00000589116 ROM1Q03395 351 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 KCTD18Q6PI47 426 aaPredicted RBP10.72□□□□□ -0.69
CCBE1-203ENST00000589116 IGFL3Q6UXB1 125 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 TMEM123Q8N131 208 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 OR10H5Q8NGA6 315 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 NEIL3Q8TAT5 605 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 TBC1D15Q8TC07 691 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 THEM6Q8WUY1 208 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 ABTB1Q969K4 478 aaPredicted RBP10.72□□□□□ -0.69
CCBE1-203ENST00000589116 TMEM54Q969K7 222 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 MCHR2Q969V1 340 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 PGLYRP3Q96LB9 341 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 OR2M2Q96R28 347 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 OR8B4Q96RC9 309 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 MED18Q9BUE0 208 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 TMED9Q9BVK6 235 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 RNF167Q9H6Y7 350 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 ACOXLQ9NUZ1 547 aa10.72□□□□□ -0.69
CCBE1-203ENST00000589116 MRM2Q9UI43 246 aaKnown RBP10.72□□□□□ -0.69
CCBE1-203ENST00000589116 PCDHGA9Q9Y5G4 932 aaKnown RBP10.72□□□□□ -0.69
CCBE1-203ENST00000589116 PRR32B1ATL7 298 aa10.71□□□□□ -0.69
CCBE1-203ENST00000589116 GPRIN2O60269 458 aa10.71□□□□□ -0.69
CCBE1-203ENST00000589116 TMCC2O75069 709 aa10.71□□□□□ -0.69
CCBE1-203ENST00000589116 ZNF432O94892 652 aa10.71□□□□□ -0.69
CCBE1-203ENST00000589116 SERPINA3P01011 423 aa10.71□□□□□ -0.69
CCBE1-203ENST00000589116 IL1AP01583 271 aa10.71□□□□□ -0.69
CCBE1-203ENST00000589116 C10orf128Q5T292 105 aa10.71□□□□□ -0.69
CCBE1-203ENST00000589116 C22orf42Q6IC83 251 aa10.71□□□□□ -0.69
CCBE1-203ENST00000589116 FCRLAQ7L513 359 aa10.71□□□□□ -0.69
CCBE1-203ENST00000589116 YIPF7Q8N8F6 280 aa10.71□□□□□ -0.69
CCBE1-203ENST00000589116 ZIC4Q8N9L1 334 aa10.71□□□□□ -0.69
CCBE1-203ENST00000589116 ZNF385AQ96PM9 386 aaKnown RBP10.71□□□□□ -0.69
CCBE1-203ENST00000589116 GLTPQ9NZD2 209 aa10.71□□□□□ -0.69
CCBE1-203ENST00000589116 IKZF2Q9UKS7 526 aa10.71□□□□□ -0.69
CCBE1-203ENST00000589116 GRIP1Q9Y3R0 1128 aa10.71□□□□□ -0.69
CCBE1-203ENST00000589116 CSAG2Q9Y5P2 127 aa10.71□□□□□ -0.69
CCBE1-203ENST00000589116 FLVCR1Q9Y5Y0 555 aa10.71□□□□□ -0.69
CCBE1-203ENST00000589116 CFAP46Q8IYW2 2715 aa10.71□□□□□ -0.7
CCBE1-203ENST00000589116 TRGV5A0A0B4J1U4 118 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 TRBV2A0A0J9YWF9 115 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 MAGEB4O15481 346 aaPredicted RBP10.7□□□□□ -0.7
CCBE1-203ENST00000589116 UPK3AO75631 287 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 SC5DO75845 299 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 SYNGR4O95473 234 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 QDPRP09417 244 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 OR8G3PP0DMU2 310 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 PSKH1P11801 424 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 EDNRAP25101 427 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 GDI2P50395 445 aaKnown RBP10.7□□□□□ -0.7
CCBE1-203ENST00000589116 SLC3A1Q07837 685 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 KCNMB1Q16558 191 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 MEP1BQ16820 701 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 ZNF404Q494X3 552 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 LIPNQ5VXI9 398 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 CARD17Q5XLA6 110 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 PAMR1Q6UXH9 720 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 RPTNQ6XPR3 784 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 ZNF679Q8IYX0 411 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 ZADH2Q8N4Q0 377 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 OR6N1Q8NGY5 312 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 OR52N5Q8NH56 324 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 NSMAFQ92636 917 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 FOXN4Q96NZ1 517 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 HDHD5Q9BXW7 423 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 MROQ9BYG7 248 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 NXF2Q9GZY0 626 aaKnown RBP10.7□□□□□ -0.7
CCBE1-203ENST00000589116 MMP27Q9H306 513 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 GALNT8Q9NY28 637 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 FOXD3Q9UJU5 478 aaPredicted RBP10.7□□□□□ -0.7
CCBE1-203ENST00000589116 MCTS1Q9ULC4 181 aaKnown RBP10.7□□□□□ -0.7
CCBE1-203ENST00000589116 PMF1-BGLAPU3KQ54 211 aa10.7□□□□□ -0.7
CCBE1-203ENST00000589116 IGKV3D-15A0A087WSY6 115 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 A0A1W2PPL8 197 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 GPR171O14626 319 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 TFECO14948 347 aaPredicted RBP10.69□□□□□ -0.7
CCBE1-203ENST00000589116 RRP8O43159 456 aaKnown RBP10.69□□□□□ -0.7
CCBE1-203ENST00000589116 LRRTM2O43300 516 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 SLC43A1O75387 559 aa10.69□□□□□ -0.7
CCBE1-203ENST00000589116 ZNF254O75437 659 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms