RNA–Protein interactions for RNA: ENST00000588905.5

GCDH-208, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-208ENST00000588905 HEXAP06865 529 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 MMP7P09237 267 aaPredicted RBP13.37□□□□□ -0.27
GCDH-208ENST00000588905 ZNF35P13682 527 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 APEHP13798 732 aaKnown RBP13.37□□□□□ -0.27
GCDH-208ENST00000588905 NPR2P20594 1047 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 SDHAP31040 664 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 THBS4P35443 961 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 CDKN2AP42771 156 aaKnown RBP13.37□□□□□ -0.27
GCDH-208ENST00000588905 RASSF2P50749 326 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 DSCR9P59020 149 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 SNRPD2P62316 118 aaKnown RBP13.37□□□□□ -0.27
GCDH-208ENST00000588905 DAG1Q14118 895 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 FLOT2Q14254 428 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 EFNB3Q15768 340 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 MICAQ29983 383 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 FOXL2NBQ6ZUU3 175 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 SLC16A14Q7RTX9 510 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 SPATA24Q86W54 205 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 LRRC18Q8N456 261 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 LINC00471Q8N535 108 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 FANK1Q8TC84 345 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 SAMD8Q96LT4 415 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 RHNO1Q9BSD3 238 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 REG4Q9BYZ8 158 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 OR52D1Q9H346 318 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 REEP1Q9H902 201 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 FBXO9Q9UK97 447 aaPredicted RBP13.37□□□□□ -0.27
GCDH-208ENST00000588905 SAMHD1Q9Y3Z3 626 aaKnown RBP13.37□□□□□ -0.27
GCDH-208ENST00000588905 SPEF1Q9Y4P9 236 aa13.37□□□□□ -0.27
GCDH-208ENST00000588905 RNF223E7ERA6 249 aa13.36□□□□□ -0.27
GCDH-208ENST00000588905 SOCS2O14508 198 aa13.36□□□□□ -0.27
GCDH-208ENST00000588905 XKRYO14609 159 aa13.36□□□□□ -0.27
GCDH-208ENST00000588905 PPP1R3DO95685 299 aa13.36□□□□□ -0.27
GCDH-208ENST00000588905 NR4A1P22736 598 aa13.36□□□□□ -0.27
GCDH-208ENST00000588905 SLC6A6P31641 620 aa13.36□□□□□ -0.27
GCDH-208ENST00000588905 RPS6KA3P51812 740 aa13.36□□□□□ -0.27
GCDH-208ENST00000588905 EFNA4P52798 201 aa13.36□□□□□ -0.27
GCDH-208ENST00000588905 SNTB2Q13425 540 aaKnown RBP13.36□□□□□ -0.27
GCDH-208ENST00000588905 KRR1Q13601 381 aaKnown RBP13.36□□□□□ -0.27
GCDH-208ENST00000588905 SLC36A2Q495M3 483 aa13.36□□□□□ -0.27
GCDH-208ENST00000588905 FAM27BQ5VT28 67 aa13.36□□□□□ -0.27
GCDH-208ENST00000588905 KRT80Q6KB66 452 aa13.36□□□□□ -0.27
GCDH-208ENST00000588905 TMEM53Q6P2H8 277 aa13.36□□□□□ -0.27
GCDH-208ENST00000588905 CLEC2AQ6UVW9 174 aa13.36□□□□□ -0.27
GCDH-208ENST00000588905 ZNF620Q6ZNG0 422 aa13.36□□□□□ -0.27
GCDH-208ENST00000588905 PTCHD4Q6ZW05 846 aa13.36□□□□□ -0.27
GCDH-208ENST00000588905 PRIMA1Q86XR5 153 aa13.36□□□□□ -0.27
GCDH-208ENST00000588905 SLCO4A1Q96BD0 722 aa13.36□□□□□ -0.27
GCDH-208ENST00000588905 ERMAPQ96PL5 475 aaPredicted RBP13.36□□□□□ -0.27
GCDH-208ENST00000588905 PLK3Q9H4B4 646 aa13.36□□□□□ -0.27
GCDH-208ENST00000588905 RNF121Q9H920 327 aa13.36□□□□□ -0.27
GCDH-208ENST00000588905 VSX1Q9NZR4 365 aaPredicted RBP13.36□□□□□ -0.27
GCDH-208ENST00000588905 ARFGEF3Q5TH69 2177 aa13.35□□□□□ -0.27
GCDH-208ENST00000588905 RTTNQ86VV8 2226 aa13.35□□□□□ -0.27
GCDH-208ENST00000588905 ARPC3O15145 178 aa13.35□□□□□ -0.27
GCDH-208ENST00000588905 F12P00748 615 aaPredicted RBP13.35□□□□□ -0.27
GCDH-208ENST00000588905 CST1P01037 141 aa13.35□□□□□ -0.27
GCDH-208ENST00000588905 CTLA4P16410 223 aa13.35□□□□□ -0.27
GCDH-208ENST00000588905 LAP3P28838 519 aa13.35□□□□□ -0.27
GCDH-208ENST00000588905 ERFP50548 548 aa13.35□□□□□ -0.27
GCDH-208ENST00000588905 AQP11Q8NBQ7 271 aa13.35□□□□□ -0.27
GCDH-208ENST00000588905 PAPD5Q8NDF8 572 aaKnown RBP13.35□□□□□ -0.27
GCDH-208ENST00000588905 OR10H5Q8NGA6 315 aa13.35□□□□□ -0.27
GCDH-208ENST00000588905 IFT27Q9BW83 186 aa13.35□□□□□ -0.27
GCDH-208ENST00000588905 SYT4Q9H2B2 425 aa13.35□□□□□ -0.27
GCDH-208ENST00000588905 KCNN2Q9H2S1 579 aa13.35□□□□□ -0.27
GCDH-208ENST00000588905 C1orf198Q9H425 327 aa13.35□□□□□ -0.27
GCDH-208ENST00000588905 EGLN3Q9H6Z9 239 aa13.35□□□□□ -0.27
GCDH-208ENST00000588905 CMAHPQ9Y471 501 aa13.35□□□□□ -0.27
GCDH-208ENST00000588905 ABCA1O95477 2261 aa13.34□□□□□ -0.27
GCDH-208ENST00000588905 CHD3Q12873 2000 aaKnown RBP13.34□□□□□ -0.27
GCDH-208ENST00000588905 A0A1W2PPL8 197 aa13.34□□□□□ -0.27
GCDH-208ENST00000588905 TMEM129A0AVI4 362 aa13.34□□□□□ -0.27
GCDH-208ENST00000588905 SLC16A7O60669 478 aa13.34□□□□□ -0.27
GCDH-208ENST00000588905 PTHP01270 115 aa13.34□□□□□ -0.27
GCDH-208ENST00000588905 IGFBP1P08833 259 aaPredicted RBP13.34□□□□□ -0.27
GCDH-208ENST00000588905 HOXB6P17509 224 aaKnown RBP13.34□□□□□ -0.27
GCDH-208ENST00000588905 GLRXP35754 106 aa13.34□□□□□ -0.27
GCDH-208ENST00000588905 GALK2Q01415 458 aa13.34□□□□□ -0.27
GCDH-208ENST00000588905 PLP2Q04941 152 aa13.34□□□□□ -0.27
GCDH-208ENST00000588905 UGT2A3Q6UWM9 527 aa13.34□□□□□ -0.27
GCDH-208ENST00000588905 RASSF6Q6ZTQ3 369 aa13.34□□□□□ -0.27
GCDH-208ENST00000588905 TMEM179BQ7Z7N9 219 aa13.34□□□□□ -0.27
GCDH-208ENST00000588905 ADCK1Q86TW2 530 aa13.34□□□□□ -0.27
GCDH-208ENST00000588905 CPEB3Q8NE35 698 aaKnown RBP13.34□□□□□ -0.27
GCDH-208ENST00000588905 FOXN4Q96NZ1 517 aa13.34□□□□□ -0.27
GCDH-208ENST00000588905 DOK1Q99704 481 aa13.34□□□□□ -0.27
GCDH-208ENST00000588905 VRK1Q99986 396 aaPredicted RBP13.34□□□□□ -0.27
GCDH-208ENST00000588905 DGCR6LQ9BY27 220 aa13.34□□□□□ -0.27
GCDH-208ENST00000588905 NUAK2Q9H093 628 aa13.34□□□□□ -0.27
GCDH-208ENST00000588905 LRMDAQ9H2I8 198 aa13.34□□□□□ -0.27
GCDH-208ENST00000588905 POLE4Q9NR33 117 aa13.34□□□□□ -0.27
GCDH-208ENST00000588905 IL20Q9NYY1 176 aa13.34□□□□□ -0.27
GCDH-208ENST00000588905 FKBP7Q9Y680 259 aa13.34□□□□□ -0.27
GCDH-208ENST00000588905 CDH10Q9Y6N8 788 aa13.34□□□□□ -0.27
GCDH-208ENST00000588905 IGHV4-30-2A0A087WSY4 118 aa13.33□□□□□ -0.28
GCDH-208ENST00000588905 IDH3BO43837 385 aa13.33□□□□□ -0.28
GCDH-208ENST00000588905 FKBP6O75344 327 aa13.33□□□□□ -0.28
GCDH-208ENST00000588905 KHDRBS3O75525 346 aaKnown RBP13.33□□□□□ -0.28
GCDH-208ENST00000588905 CST2P09228 141 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms