RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 ZNF32P17041 273 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 CDAP32320 146 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 MPV17P39210 176 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 AQP2P41181 271 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 GDI2P50395 445 aaKnown RBP11.9□□□□□ -0.5
DNMT1-213ENST00000587604 MTPNP58546 118 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 PSG4Q00888 419 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 SELPLGQ14242 412 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 TUSC1Q2TAM9 212 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 SPATA46Q5T0L3 261 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 ARMC4Q5T2S8 1044 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 FAM27BQ5VT28 67 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 SHISA2Q6UWI4 295 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 RBMS3Q6XE24 437 aaKnown RBP11.9□□□□□ -0.5
DNMT1-213ENST00000587604 DHDDSQ86SQ9 333 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 LRRC8CQ8TDW0 803 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 ST7LQ8TDW4 575 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 SLC26A7Q8TE54 656 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 IPCEF1Q8WWN9 437 aaPredicted RBP11.9□□□□□ -0.5
DNMT1-213ENST00000587604 RASSF5Q8WWW0 418 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 NABP1Q96AH0 204 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 NMD3Q96D46 503 aaKnown RBP11.9□□□□□ -0.5
DNMT1-213ENST00000587604 DIRC2Q96SL1 478 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 CGREF1Q99674 301 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 OR2J1Q9GZK6 312 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 ZNF696Q9H7X3 374 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 KAT8Q9H7Z6 458 aaKnown RBP11.9□□□□□ -0.5
DNMT1-213ENST00000587604 NANOGQ9H9S0 305 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 UBAP1Q9NZ09 502 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 CGGBP1Q9UFW8 167 aaPredicted RBP11.9□□□□□ -0.5
DNMT1-213ENST00000587604 ZDHHC8Q9ULC8 765 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 NDUFAF1Q9Y375 327 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 UGT2A1Q9Y4X1 527 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 PPIAL4AQ9Y536 164 aa11.9□□□□□ -0.5
DNMT1-213ENST00000587604 ZSCAN5BA6NJL1 495 aa11.89□□□□□ -0.51
DNMT1-213ENST00000587604 NPIPB13A6NJU9 1138 aa11.89□□□□□ -0.51
DNMT1-213ENST00000587604 NPIPB4C9JG80 1138 aa11.89□□□□□ -0.51
DNMT1-213ENST00000587604 TMPRSS2O15393 492 aa11.89□□□□□ -0.51
DNMT1-213ENST00000587604 ICMTO60725 284 aa11.89□□□□□ -0.51
DNMT1-213ENST00000587604 OR7A10O76100 309 aa11.89□□□□□ -0.51
DNMT1-213ENST00000587604 SLC2A10O95528 541 aa11.89□□□□□ -0.51
DNMT1-213ENST00000587604 CD55P08174 381 aa11.89□□□□□ -0.51
DNMT1-213ENST00000587604 TSPAN19P0C672 248 aa11.89□□□□□ -0.51
DNMT1-213ENST00000587604 ZFP36P26651 326 aaKnown RBP11.89□□□□□ -0.51
DNMT1-213ENST00000587604 PCGF2P35227 344 aa11.89□□□□□ -0.51
DNMT1-213ENST00000587604 RBM34P42696 430 aaKnown RBP11.89□□□□□ -0.51
DNMT1-213ENST00000587604 SGCAQ16586 387 aa11.89□□□□□ -0.51
DNMT1-213ENST00000587604 INTS11Q5TA45 600 aaKnown RBP11.89□□□□□ -0.51
DNMT1-213ENST00000587604 ZNF771Q7L3S4 317 aaPredicted RBP11.89□□□□□ -0.51
DNMT1-213ENST00000587604 ALDH16A1Q8IZ83 802 aa11.89□□□□□ -0.51
DNMT1-213ENST00000587604 AKR7LQ8NHP1 331 aa11.89□□□□□ -0.51
DNMT1-213ENST00000587604 LIPHQ8WWY8 451 aa11.89□□□□□ -0.51
DNMT1-213ENST00000587604 POP5Q969H6 163 aaKnown RBP11.89□□□□□ -0.51
DNMT1-213ENST00000587604 SGTBQ96EQ0 304 aa11.89□□□□□ -0.51
DNMT1-213ENST00000587604 NPTNQ9Y639 398 aa11.89□□□□□ -0.51
DNMT1-213ENST00000587604 TGP01266 2768 aa11.89□□□□□ -0.51
DNMT1-213ENST00000587604 IGKV1D-43A0A0B4J1Z2 117 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 GMNCA6NCL1 334 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 H3BSA7 217 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 ANGPT2O15123 496 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 NR2C1P13056 603 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 PRTN3P24158 256 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 CRYBA2P53672 197 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 PPP1CBP62140 327 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 ERVK-25P63136 954 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 ZMAT1Q5H9K5 638 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 SLC25A47Q6Q0C1 308 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 CCDC80Q76M96 950 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 DOK3Q7L591 496 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 NKAIN4Q8IVV8 208 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 SIGLECL1Q8N7X8 197 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 DEFB108BQ8NET1 73 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 OR10A6Q8NH74 314 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 MOSPD2Q8NHP6 518 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 PFN4Q8NHR9 129 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 ABHD4Q8TB40 342 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 GEMIN6Q8WXD5 167 aaKnown RBP11.88□□□□□ -0.51
DNMT1-213ENST00000587604 NSMAFQ92636 917 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 HDAC2Q92769 488 aaKnown RBP11.88□□□□□ -0.51
DNMT1-213ENST00000587604 LRRC58Q96CX6 371 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 GPA33Q99795 319 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 OR2H1Q9GZK4 316 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 POLR2J2Q9GZM3 115 aaKnown RBP11.88□□□□□ -0.51
DNMT1-213ENST00000587604 POLR2J3Q9H1A7 115 aaKnown RBP11.88□□□□□ -0.51
DNMT1-213ENST00000587604 TXNIPQ9H3M7 391 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 MMP26Q9NRE1 261 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 C20orf141Q9NUB4 165 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 PURGQ9UJV8 347 aaKnown RBP11.88□□□□□ -0.51
DNMT1-213ENST00000587604 NUP50Q9UKX7 468 aa11.88□□□□□ -0.51
DNMT1-213ENST00000587604 POLR3KQ9Y2Y1 108 aaPredicted RBP11.88□□□□□ -0.51
DNMT1-213ENST00000587604 NGFP01138 241 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 IGHV2-70P01814 119 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 SBK2P0C263 348 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 GZMMP51124 257 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 ARHGDIAP52565 204 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 TAS2R41P59536 307 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 FMODQ06828 376 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 CD47Q08722 323 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 CDK5R2Q13319 367 aa11.87□□□□□ -0.51
DNMT1-213ENST00000587604 NFYCQ13952 458 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms