RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 SLC22A31A6NKX4 558 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 C19orf84I3L1E1 186 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 UBL3O95164 117 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 CLDN1O95832 211 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 CLIC3O95833 236 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 GPANK1O95872 356 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 GAAP10253 952 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 CD79AP11912 226 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 ZNF823P16415 610 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 PAX7P23759 505 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 GSTT1P30711 240 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 PCBD1P61457 104 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 SNRPGP62308 76 aaKnown RBP11.92□□□□□ -0.5
VMP1-203ENST00000586245 LSM6P62312 80 aaKnown RBP11.92□□□□□ -0.5
VMP1-203ENST00000586245 TEKQ02763 1124 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 PPA1Q15181 289 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 KCNMB1Q16558 191 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 SLC36A2Q495M3 483 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 C6orf52Q5T4I8 152 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 FAM27BQ5VT28 67 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 AADACL4Q5VUY2 407 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 MEDAGQ5VYS4 303 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 ALKBH2Q6NS38 261 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 MEPCEQ7L2J0 689 aaKnown RBP11.92□□□□□ -0.5
VMP1-203ENST00000586245 BCDIN3DQ7Z5W3 292 aaKnown RBP11.92□□□□□ -0.5
VMP1-203ENST00000586245 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.92□□□□□ -0.5
VMP1-203ENST00000586245 SKA3Q8IX90 412 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 ENTHD1Q8IYW4 607 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 LINC01560Q8TB33 94 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 ZNRF4Q8WWF5 429 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 C11orf40Q8WZ69 217 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 TFAP2CQ92754 450 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 RFKQ969G6 155 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 UBE2FQ969M7 185 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 ZC3HAV1LQ96H79 300 aaKnown RBP11.92□□□□□ -0.5
VMP1-203ENST00000586245 Q96MT0 163 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 CDADC1Q9BWV3 514 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 RNF121Q9H920 327 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 SLC24A3Q9HC58 644 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 MOV10Q9HCE1 1003 aaKnown RBP11.92□□□□□ -0.5
VMP1-203ENST00000586245 CCNB1IP1Q9NPC3 277 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 CLN6Q9NWW5 311 aa11.92□□□□□ -0.5
VMP1-203ENST00000586245 USP9XQ93008 2570 aaPredicted RBP11.91□□□□□ -0.5
VMP1-203ENST00000586245 A0A1W2PR80 420 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 TVP23AA6NH52 213 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 SNTNA6NMZ2 147 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 C12orf71A8MTZ7 269 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 CASKO14936 926 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 MPZL1O95297 269 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 HLA-HP01893 362 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 HRGP04196 525 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 SCG5P05408 212 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 CST2P09228 141 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 SLC2A5P22732 501 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 KIR2DL3P43628 341 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 CDH11P55287 796 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 TUBA1BP68363 451 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 TUBA4AP68366 448 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 ADAM8P78325 824 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 SNTB1Q13884 538 aaKnown RBP11.91□□□□□ -0.5
VMP1-203ENST00000586245 TAB1Q15750 504 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 OCLNQ16625 522 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 SLC25A30Q5SVS4 291 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 LINC01590Q5TEZ4 76 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 TMEM53Q6P2H8 277 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 UGT2A3Q6UWM9 527 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 MEX3BQ6ZN04 569 aaKnown RBP11.91□□□□□ -0.5
VMP1-203ENST00000586245 TUBA1AQ71U36 451 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 WFDC8Q8IUA0 241 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 WDR31Q8NA23 367 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 ZNF511Q8NB15 262 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 SLC26A10Q8NG04 563 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 RHOXF1Q8NHV9 184 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 ZMYND19Q96E35 227 aaPredicted RBP11.91□□□□□ -0.5
VMP1-203ENST00000586245 ZNF582Q96NG8 517 aaPredicted RBP11.91□□□□□ -0.5
VMP1-203ENST00000586245 DACH2Q96NX9 599 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 WFIKKN1Q96NZ8 548 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 TEAD3Q99594 435 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 ZNF184Q99676 751 aaPredicted RBP11.91□□□□□ -0.5
VMP1-203ENST00000586245 WACQ9BTA9 647 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 ZNF416Q9BWM5 594 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 EMC7Q9NPA0 242 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 NGBQ9NPG2 151 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 DNAJC27Q9NZQ0 273 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 KCNG2Q9UJ96 466 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 SLC25A15Q9Y619 301 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 HSPE1-MOB4S4R3N1 261 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 CACNA1CQ13936 2221 aa11.91□□□□□ -0.5
VMP1-203ENST00000586245 CCDC182A6NF36 153 aa11.9□□□□□ -0.5
VMP1-203ENST00000586245 TMCC2O75069 709 aa11.9□□□□□ -0.5
VMP1-203ENST00000586245 ENTPD6O75354 484 aa11.9□□□□□ -0.5
VMP1-203ENST00000586245 RAB36O95755 333 aa11.9□□□□□ -0.5
VMP1-203ENST00000586245 TFP02787 698 aa11.9□□□□□ -0.5
VMP1-203ENST00000586245 HTR1FP30939 366 aa11.9□□□□□ -0.5
VMP1-203ENST00000586245 ARR3P36575 388 aa11.9□□□□□ -0.5
VMP1-203ENST00000586245 HCFC1P51610 2035 aa11.9□□□□□ -0.5
VMP1-203ENST00000586245 RAB1AP62820 205 aa11.9□□□□□ -0.5
VMP1-203ENST00000586245 PIGFQ07326 219 aa11.9□□□□□ -0.5
VMP1-203ENST00000586245 AQP6Q13520 282 aa11.9□□□□□ -0.5
VMP1-203ENST00000586245 ENDOGQ14249 297 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms