RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 PTPRFP10586 1907 aa5.12□□□□□ -1.59
TPM4-203ENST00000586193 COL2A1P02458 1487 aaPredicted RBP5.12□□□□□ -1.59
TPM4-203ENST00000586193 EFCAB7A8K855 629 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 K7ENP7 123 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 SAP18O00422 153 aaKnown RBP5.11□□□□□ -1.59
TPM4-203ENST00000586193 ZBTB5O15062 677 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 FGFR1OPO95684 399 aaKnown RBP5.11□□□□□ -1.59
TPM4-203ENST00000586193 LALBAP00709 142 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 IGLV1-44P01699 117 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 IFNW1P05000 195 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 LAMP1P11279 417 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 CDK4P11802 303 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 LCN1P31025 176 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 GPM6AP51674 278 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 CRISP1P54107 249 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 GPX6P59796 221 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 UBE2MP61081 183 aaKnown RBP5.11□□□□□ -1.59
TPM4-203ENST00000586193 GNG11P61952 73 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 ERVK-25P63136 954 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 LCN2P80188 198 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 LY6DQ14210 128 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 NSUN5P1Q3KNT7 163 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 ZCWPW2Q504Y3 356 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 ZNF506Q5JVG8 444 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 GPR157Q5UAW9 335 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 GPR107Q5VW38 600 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 CERS6Q6ZMG9 384 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 MBOAT1Q6ZNC8 495 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 ACOT7LQ6ZUV0 252 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 STXBP4Q6ZWJ1 553 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 MTERF4Q7Z6M4 381 aaKnown RBP5.11□□□□□ -1.59
TPM4-203ENST00000586193 NRMQ8IXM6 262 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 GPR65Q8IYL9 337 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 LIX1Q8N485 282 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 JAGN1Q8N5M9 183 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 LYPD6BQ8NI32 183 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 NPRL2Q8WTW4 380 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 CCDC12Q8WUD4 166 aaPredicted RBP5.11□□□□□ -1.59
TPM4-203ENST00000586193 TFB1MQ8WVM0 346 aaKnown RBP5.11□□□□□ -1.59
TPM4-203ENST00000586193 NAT6Q93015 286 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 SLC45A3Q96JT2 553 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 NOL4LQ96MY1 436 aaPredicted RBP5.11□□□□□ -1.59
TPM4-203ENST00000586193 ATF6BQ99941 703 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 TMEM246Q9BRR3 403 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 TMEM175Q9BSA9 504 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 RETNQ9HD89 108 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 IMPAD1Q9NX62 359 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 UXTQ9UBK9 157 aaPredicted RBP5.11□□□□□ -1.59
TPM4-203ENST00000586193 ASIC3Q9UHC3 531 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 SLC17A4Q9Y2C5 497 aa5.11□□□□□ -1.59
TPM4-203ENST00000586193 ARID1BQ8NFD5 2236 aaPredicted RBP5.11□□□□□ -1.59
TPM4-203ENST00000586193 IGLV7-46A0A075B6I9 117 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 IGLV3-22A0A075B6J6 115 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 CCL21O00585 134 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 SOX15O60248 233 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 EIF4E2O60573 245 aaKnown RBP5.1□□□□□ -1.59
TPM4-203ENST00000586193 CLIC3O95833 236 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 C2P06681 752 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 MELTFP08582 738 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 GCKP35557 465 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 IST1P53990 364 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 CHRNB3Q05901 458 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 CD300CQ08708 224 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 GPR176Q14439 515 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 CYTH1Q15438 398 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 PARP14Q460N5 1801 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 SLC22A6Q4U2R8 563 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 FRA10AC1Q70Z53 315 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 COMTD1Q86VU5 262 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 FTMTQ8N4E7 242 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 INO80EQ8NBZ0 244 aaPredicted RBP5.1□□□□□ -1.59
TPM4-203ENST00000586193 OR5B3Q8NH48 314 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 SLC7A13Q8TCU3 470 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 ACER1Q8TDN7 264 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 MYDGFQ969H8 173 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 CSPG4P5Q96PW8 444 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 SORT1Q99523 831 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 LITAFQ99732 161 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 KCNS3Q9BQ31 491 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 KLHDC3Q9BQ90 382 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 UBXN6Q9BZV1 441 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 TM6SF2Q9BZW4 377 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 ACTR3CQ9C0K3 210 aaPredicted RBP5.1□□□□□ -1.59
TPM4-203ENST00000586193 ELOVL4Q9GZR5 314 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 ARMCX1Q9P291 453 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 B4GALT7Q9UBV7 327 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 MMP17Q9ULZ9 603 aa5.1□□□□□ -1.59
TPM4-203ENST00000586193 MYH10P35580 1976 aa5.09□□□□□ -1.59
TPM4-203ENST00000586193 LOC285556D6RIA3 1793 aa5.09□□□□□ -1.59
TPM4-203ENST00000586193 IGKV1D-8A0A087WSZ0 117 aa5.09□□□□□ -1.59
TPM4-203ENST00000586193 PVALEFA0A1B0GWK0 134 aa5.09□□□□□ -1.59
TPM4-203ENST00000586193 FAM220BPB1ANY3 271 aa5.09□□□□□ -1.59
TPM4-203ENST00000586193 E9PAM4 449 aa5.09□□□□□ -1.59
TPM4-203ENST00000586193 LOC110117498-PIK3R3F6TDL0 507 aa5.09□□□□□ -1.59
TPM4-203ENST00000586193 CD160O95971 181 aa5.09□□□□□ -1.59
TPM4-203ENST00000586193 CCL5P13501 91 aa5.09□□□□□ -1.59
TPM4-203ENST00000586193 MGMTP16455 207 aa5.09□□□□□ -1.59
TPM4-203ENST00000586193 SLC2A5P22732 501 aa5.09□□□□□ -1.59
TPM4-203ENST00000586193 IGHV1-2P23083 117 aa5.09□□□□□ -1.59
TPM4-203ENST00000586193 CFHR2P36980 270 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms