RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 PRRG3Q9BZD7 231 aa20.14■□□□□ 0.81
LSM7-202ENST00000585395 SIAEQ9HAT2 523 aa20.14■□□□□ 0.81
LSM7-202ENST00000585395 NPAP1Q9NZP6 1156 aa20.14■□□□□ 0.81
LSM7-202ENST00000585395 RIIAD1A6NNX1 92 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 H3BNX3 289 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 H7C1C5 153 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 SEC14L2O76054 403 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 HMGN1P05114 100 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 GRK5P34947 590 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 LCN6P62502 163 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 FMODQ06828 376 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.13■□□□□ 0.81
LSM7-202ENST00000585395 TMEM53Q6P2H8 277 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 SLC22A25Q6T423 547 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 OR52E2Q8NGJ4 325 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 OR4K13Q8NH42 304 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 PKP2Q99959 881 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 RBM4BQ9BQ04 359 aaKnown RBP20.13■□□□□ 0.81
LSM7-202ENST00000585395 KCNS3Q9BQ31 491 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 RBM4Q9BWF3 364 aaKnown RBP20.13■□□□□ 0.81
LSM7-202ENST00000585395 PLA2G12AQ9BZM1 189 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 SYT4Q9H2B2 425 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 NELFAQ9H3P2 528 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 SEC61A2Q9H9S3 476 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 REV1Q9UBZ9 1251 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 OAZ3Q9UMX2 235 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 LAMP3Q9UQV4 416 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 ORC6Q9Y5N6 252 aa20.13■□□□□ 0.81
LSM7-202ENST00000585395 A0A1W2PPL8 197 aa20.12■□□□□ 0.81
LSM7-202ENST00000585395 SLC16A7O60669 478 aa20.12■□□□□ 0.81
LSM7-202ENST00000585395 RAB36O95755 333 aa20.12■□□□□ 0.81
LSM7-202ENST00000585395 CD79AP11912 226 aa20.12■□□□□ 0.81
LSM7-202ENST00000585395 CBR1P16152 277 aa20.12■□□□□ 0.81
LSM7-202ENST00000585395 HIST1H1CP16403 213 aaKnown RBP20.12■□□□□ 0.81
LSM7-202ENST00000585395 ESRRGP62508 458 aa20.12■□□□□ 0.81
LSM7-202ENST00000585395 GSG1Q2KHT4 349 aa20.12■□□□□ 0.81
LSM7-202ENST00000585395 PGGHGQ32M88 737 aa20.12■□□□□ 0.81
LSM7-202ENST00000585395 ZNF672Q499Z4 452 aaPredicted RBP20.12■□□□□ 0.81
LSM7-202ENST00000585395 Q5PR19 223 aa20.12■□□□□ 0.81
LSM7-202ENST00000585395 SHEQ5VZ18 495 aa20.12■□□□□ 0.81
LSM7-202ENST00000585395 SEZ6L2Q6UXD5 910 aa20.12■□□□□ 0.81
LSM7-202ENST00000585395 SLC16A14Q7RTX9 510 aa20.12■□□□□ 0.81
LSM7-202ENST00000585395 LRRC75A-AS1Q8N1F1 130 aa20.12■□□□□ 0.81
LSM7-202ENST00000585395 OR8D4Q8NGM9 314 aa20.12■□□□□ 0.81
LSM7-202ENST00000585395 NEUROG1Q92886 237 aa20.12■□□□□ 0.81
LSM7-202ENST00000585395 WACQ9BTA9 647 aa20.12■□□□□ 0.81
LSM7-202ENST00000585395 RERGLQ9H628 205 aa20.12■□□□□ 0.81
LSM7-202ENST00000585395 FAIMQ9NVQ4 179 aa20.12■□□□□ 0.81
LSM7-202ENST00000585395 ALPK2Q86TB3 2170 aa20.11■□□□□ 0.81
LSM7-202ENST00000585395 HEATR1Q9H583 2144 aaKnown RBP20.11■□□□□ 0.81
LSM7-202ENST00000585395 SAC3D1A6NKF1 404 aa20.11■□□□□ 0.81
LSM7-202ENST00000585395 LY6G6DO95868 133 aa20.11■□□□□ 0.81
LSM7-202ENST00000585395 ZNF3P17036 446 aa20.11■□□□□ 0.81
LSM7-202ENST00000585395 CDKN2AP42771 156 aaKnown RBP20.11■□□□□ 0.81
LSM7-202ENST00000585395 PCBD1P61457 104 aa20.11■□□□□ 0.81
LSM7-202ENST00000585395 SGCAQ16586 387 aa20.11■□□□□ 0.81
LSM7-202ENST00000585395 SLC35F1Q5T1Q4 408 aa20.11■□□□□ 0.81
LSM7-202ENST00000585395 KRTAP1-3Q8IUG1 177 aa20.11■□□□□ 0.81
LSM7-202ENST00000585395 PQLC1Q8N2U9 271 aa20.11■□□□□ 0.81
LSM7-202ENST00000585395 PLEKHA8Q96JA3 519 aa20.11■□□□□ 0.81
LSM7-202ENST00000585395 NMNAT3Q96T66 252 aa20.11■□□□□ 0.81
LSM7-202ENST00000585395 RNF121Q9H920 327 aa20.11■□□□□ 0.81
LSM7-202ENST00000585395 CISD1Q9NZ45 108 aaKnown RBP20.11■□□□□ 0.81
LSM7-202ENST00000585395 FKBP7Q9Y680 259 aa20.11■□□□□ 0.81
LSM7-202ENST00000585395 ARID1AO14497 2285 aa20.11■□□□□ 0.81
LSM7-202ENST00000585395 TLN2Q9Y4G6 2542 aa20.11■□□□□ 0.81
LSM7-202ENST00000585395 CADP27708 2225 aa20.1■□□□□ 0.81
LSM7-202ENST00000585395 BAG2O95816 211 aa20.1■□□□□ 0.81
LSM7-202ENST00000585395 TP53P04637 393 aaPredicted RBP20.1■□□□□ 0.81
LSM7-202ENST00000585395 MSR1P21757 451 aa20.1■□□□□ 0.81
LSM7-202ENST00000585395 PAICSP22234 425 aaKnown RBP20.1■□□□□ 0.81
LSM7-202ENST00000585395 IGFBP5P24593 272 aa20.1■□□□□ 0.81
LSM7-202ENST00000585395 CD40P25942 277 aa20.1■□□□□ 0.81
LSM7-202ENST00000585395 GIPRP48546 466 aa20.1■□□□□ 0.81
LSM7-202ENST00000585395 DAPP51397 102 aa20.1■□□□□ 0.81
LSM7-202ENST00000585395 GINS1Q14691 196 aa20.1■□□□□ 0.81
LSM7-202ENST00000585395 FOXL2NBQ6ZUU3 175 aa20.1■□□□□ 0.81
LSM7-202ENST00000585395 PTCHD4Q6ZW05 846 aa20.1■□□□□ 0.81
LSM7-202ENST00000585395 GLB1L2Q8IW92 636 aa20.1■□□□□ 0.81
LSM7-202ENST00000585395 SDR9C7Q8NEX9 313 aa20.1■□□□□ 0.81
LSM7-202ENST00000585395 IL17RDQ8NFM7 739 aa20.1■□□□□ 0.81
LSM7-202ENST00000585395 OR2T4Q8NH00 348 aa20.1■□□□□ 0.81
LSM7-202ENST00000585395 SMAP2Q8WU79 429 aaPredicted RBP20.1■□□□□ 0.81
LSM7-202ENST00000585395 SLC38A2Q96QD8 506 aa20.1■□□□□ 0.81
LSM7-202ENST00000585395 C9orf16Q9BUW7 83 aa20.1■□□□□ 0.81
LSM7-202ENST00000585395 CCNB1IP1Q9NPC3 277 aa20.1■□□□□ 0.81
LSM7-202ENST00000585395 UGT2A1Q9Y4X1 527 aa20.1■□□□□ 0.81
LSM7-202ENST00000585395 TMCC2O75069 709 aa20.09■□□□□ 0.81
LSM7-202ENST00000585395 PTHP01270 115 aa20.09■□□□□ 0.81
LSM7-202ENST00000585395 LAP3P28838 519 aa20.09■□□□□ 0.81
LSM7-202ENST00000585395 CENPAP49450 140 aa20.09■□□□□ 0.81
LSM7-202ENST00000585395 CRISP1P54107 249 aa20.09■□□□□ 0.81
LSM7-202ENST00000585395 GLO1Q04760 184 aa20.09■□□□□ 0.81
LSM7-202ENST00000585395 PLP2Q04941 152 aa20.09■□□□□ 0.81
LSM7-202ENST00000585395 FAM27BQ5VT28 67 aa20.09■□□□□ 0.81
LSM7-202ENST00000585395 KDM4DQ6B0I6 523 aa20.09■□□□□ 0.81
LSM7-202ENST00000585395 SKA3Q8IX90 412 aa20.09■□□□□ 0.81
LSM7-202ENST00000585395 OR4Q3Q8NH05 313 aa20.09■□□□□ 0.81
LSM7-202ENST00000585395 NUAK2Q9H093 628 aa20.09■□□□□ 0.81
LSM7-202ENST00000585395 RACGAP1Q9H0H5 632 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms