RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 CSNK2BP67870 215 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 ADAM8P78325 824 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 POU4F2Q12837 409 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 GABRA6Q16445 453 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 KCNMB1Q16558 191 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 FAM27BQ5VT28 67 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 KLHL24Q6TFL4 600 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 STAC2Q6ZMT1 411 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.07■□□□□ 0.16
RFFL-211ENST00000584541 C17orf78Q8N4C9 275 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 ZNF511Q8NB15 262 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 C11orf40Q8WZ69 217 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 INTS14Q96SY0 518 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 CDADC1Q9BWV3 514 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 HAO2Q9NYQ3 351 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 KCNG2Q9UJ96 466 aa16.07■□□□□ 0.16
RFFL-211ENST00000584541 A0A096LPE4 126 aa16.06■□□□□ 0.16
RFFL-211ENST00000584541 A0A1W2PPZ6 126 aa16.06■□□□□ 0.16
RFFL-211ENST00000584541 C12orf71A8MTZ7 269 aa16.06■□□□□ 0.16
RFFL-211ENST00000584541 TMCC2O75069 709 aa16.06■□□□□ 0.16
RFFL-211ENST00000584541 MPZL1O95297 269 aa16.06■□□□□ 0.16
RFFL-211ENST00000584541 GPANK1O95872 356 aa16.06■□□□□ 0.16
RFFL-211ENST00000584541 HOXB1P14653 301 aaPredicted RBP16.06■□□□□ 0.16
RFFL-211ENST00000584541 NUDT6P53370 316 aa16.06■□□□□ 0.16
RFFL-211ENST00000584541 UBE2NP61088 152 aaKnown RBP16.06■□□□□ 0.16
RFFL-211ENST00000584541 LSM6P62312 80 aaKnown RBP16.06■□□□□ 0.16
RFFL-211ENST00000584541 FAM27E3Q08E93 113 aa16.06■□□□□ 0.16
RFFL-211ENST00000584541 TSC22D1Q15714 1073 aa16.06■□□□□ 0.16
RFFL-211ENST00000584541 SLC16A14Q7RTX9 510 aa16.06■□□□□ 0.16
RFFL-211ENST00000584541 DPPA2Q7Z7J5 298 aa16.06■□□□□ 0.16
RFFL-211ENST00000584541 ERI1Q8IV48 349 aaKnown RBP16.06■□□□□ 0.16
RFFL-211ENST00000584541 CCDC36Q8IYA8 594 aa16.06■□□□□ 0.16
RFFL-211ENST00000584541 LRRC18Q8N456 261 aa16.06■□□□□ 0.16
RFFL-211ENST00000584541 NANOS1Q8WY41 292 aaKnown RBP16.06■□□□□ 0.16
RFFL-211ENST00000584541 BCL2L2Q92843 193 aaPredicted RBP16.06■□□□□ 0.16
RFFL-211ENST00000584541 NABP1Q96AH0 204 aa16.06■□□□□ 0.16
RFFL-211ENST00000584541 CNN2Q99439 309 aaKnown RBP16.06■□□□□ 0.16
RFFL-211ENST00000584541 COMMD3-BMI1R4GMX3 469 aa16.06■□□□□ 0.16
RFFL-211ENST00000584541 ZNF462Q96JM2 2506 aa16.06■□□□□ 0.16
RFFL-211ENST00000584541 HCFC1P51610 2035 aa16.06■□□□□ 0.16
RFFL-211ENST00000584541 IRGMA1A4Y4 181 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 FAM20BO75063 409 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 TFP02787 698 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 CST2P09228 141 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 DBTP11182 482 aaKnown RBP16.05■□□□□ 0.16
RFFL-211ENST00000584541 UGT2B10P36537 528 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 CAPZA2P47755 286 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 ENTPD1P49961 510 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 CXCR4P61073 352 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 PCBD1P61457 104 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 ZNF91Q05481 1191 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 GGTLC2Q14390 218 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 SMN1Q16637 294 aaKnown RBP16.05■□□□□ 0.16
RFFL-211ENST00000584541 TBRG1Q3YBR2 411 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 SLC36A2Q495M3 483 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 C6orf141Q5SZD1 244 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 B3GLCTQ6Y288 498 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 P2RY8Q86VZ1 359 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 HTRA1Q92743 480 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 RNFT2Q96EX2 444 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 BOD1Q96IK1 185 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 SH3GL3Q99963 347 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 WACQ9BTA9 647 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 OR10A4Q9H209 315 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 MARCH7Q9H992 704 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 EMC7Q9NPA0 242 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 CCNB1IP1Q9NPC3 277 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 MRPL22Q9NWU5 206 aaKnown RBP16.05■□□□□ 0.16
RFFL-211ENST00000584541 SCN3BQ9NY72 215 aa16.05■□□□□ 0.16
RFFL-211ENST00000584541 FLNBO75369 2602 aaKnown RBP16.05■□□□□ 0.16
RFFL-211ENST00000584541 MRPL3P09001 348 aaKnown RBP16.04■□□□□ 0.16
RFFL-211ENST00000584541 SPARCP09486 303 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 NAA10P41227 235 aaPredicted RBP16.04■□□□□ 0.16
RFFL-211ENST00000584541 AQP6Q13520 282 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 CDSNQ15517 529 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 MEP1BQ16820 701 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 HIKESHIQ53FT3 197 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 KLHL22Q53GT1 634 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 C1QTNF12Q5T7M4 302 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 LYPD4Q6UWN0 246 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 SHFQ7M4L6 423 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 SLC16A9Q7RTY1 509 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 SKA3Q8IX90 412 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 BPIFB6Q8NFQ5 453 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 OR51G2Q8NGK0 314 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 OR6N2Q8NGY6 317 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 OR2AJ1Q8NGZ0 328 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 ZNF416Q9BWM5 594 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 ACTR6Q9GZN1 396 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 RNF121Q9H920 327 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 WDR76Q9H967 626 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 AMBNQ9NP70 447 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 OBP2BQ9NPH6 170 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 SLC17A5Q9NRA2 495 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 PLCXD1Q9NUJ7 323 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 AMDHD2Q9Y303 409 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 PCDHGB1Q9Y5G3 927 aa16.04■□□□□ 0.16
RFFL-211ENST00000584541 OR5H1A6NKK0 313 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 ZNF593O00488 134 aaPredicted RBP16.03■□□□□ 0.16
RFFL-211ENST00000584541 SELENOFO60613 162 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms