RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 KLF3P57682 345 aaPredicted RBP9.52□□□□□ -0.89
CCDC47-206ENST00000584112 RPL27P61353 136 aaKnown RBP9.52□□□□□ -0.89
CCDC47-206ENST00000584112 MRPS34P82930 218 aaKnown RBP9.52□□□□□ -0.89
CCDC47-206ENST00000584112 LIPEQ05469 1076 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 TRAM2Q15035 370 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 NKPD1Q17RQ9 610 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 FAM205BPQ63HN1 556 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 CCBE1Q6UXH8 406 aaPredicted RBP9.52□□□□□ -0.89
CCDC47-206ENST00000584112 UNQ6126/PRO20091Q6UXV3 157 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 SLC15A3Q8IY34 581 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 OFCC1Q8IZS5 231 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 LRRC18Q8N456 261 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 MOSPD2Q8NHP6 518 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 ZNF519Q8TB69 540 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 GEMIN6Q8WXD5 167 aaKnown RBP9.52□□□□□ -0.89
CCDC47-206ENST00000584112 C11orf40Q8WZ69 217 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 RDH5Q92781 318 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 ALG12Q9BV10 488 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 EFCAB1Q9HAE3 211 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 CMTM6Q9NX76 183 aa9.52□□□□□ -0.89
CCDC47-206ENST00000584112 CXCR6O00574 342 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 SLC2A10O95528 541 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 ZNF682O95780 498 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 IGHMP01871 453 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 MT-ND5P03915 603 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 MMP7P09237 267 aaPredicted RBP9.51□□□□□ -0.89
CCDC47-206ENST00000584112 FAM157BP0CG42 384 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 ZNF250P15622 560 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 PCMT1P22061 227 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 MDH1P40925 334 aaKnown RBP9.51□□□□□ -0.89
CCDC47-206ENST00000584112 GPR6P46095 362 aaPredicted RBP9.51□□□□□ -0.89
CCDC47-206ENST00000584112 UCP2P55851 309 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 MRPS11P82912 194 aaKnown RBP9.51□□□□□ -0.89
CCDC47-206ENST00000584112 TOP3AQ13472 1001 aaPredicted RBP9.51□□□□□ -0.89
CCDC47-206ENST00000584112 LAPTM4AQ15012 233 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 MAD2L1BPQ15013 274 aaPredicted RBP9.51□□□□□ -0.89
CCDC47-206ENST00000584112 MOGQ16653 247 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 IFI44LQ53G44 452 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 PABPC1L2AQ5JQF8 200 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 ELFN2Q5R3F8 820 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 THEM4Q5T1C6 240 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 VTCN1Q7Z7D3 282 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 OAFQ86UD1 273 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 LRP11Q86VZ4 500 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 NRMQ8IXM6 262 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 ALDH16A1Q8IZ83 802 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 RNF113BQ8IZP6 322 aaKnown RBP9.51□□□□□ -0.89
CCDC47-206ENST00000584112 PAQR4Q8N4S7 273 aaPredicted RBP9.51□□□□□ -0.89
CCDC47-206ENST00000584112 LINC01356Q8N9X3 169 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 SYNPRQ8TBG9 265 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 HDAC2Q92769 488 aaKnown RBP9.51□□□□□ -0.89
CCDC47-206ENST00000584112 RBP7Q96R05 134 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 SNX18Q96RF0 628 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 ZNF416Q9BWM5 594 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 NDEL1Q9GZM8 345 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 UNKLQ9H9P5 680 aaKnown RBP9.51□□□□□ -0.89
CCDC47-206ENST00000584112 SLCO1C1Q9NYB5 712 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 TAAR3PQ9P1P4 343 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 MYEF2Q9P2K5 600 aaKnown RBP9.51□□□□□ -0.89
CCDC47-206ENST00000584112 FZR1Q9UM11 496 aa9.51□□□□□ -0.89
CCDC47-206ENST00000584112 IGLV3-9A0A075B6K5 115 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 A6NIZ1 184 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 EFCAB9A8MZ26 197 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 LYNX1G3V0Z9 82 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 NME4O00746 187 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 HPXP02790 462 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 LYNX1P0DP58 116 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 NAT2P11245 290 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 CCL2P13500 99 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 ZNF32P17041 273 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 TCN1P20061 433 aaPredicted RBP9.5□□□□□ -0.89
CCDC47-206ENST00000584112 DRD4P21917 467 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 STOMP27105 288 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 CDAP32320 146 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 YAP1P46937 504 aaKnown RBP9.5□□□□□ -0.89
CCDC47-206ENST00000584112 SLC7A2P52569 658 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 SEC24CP53992 1094 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 CDH15P55291 814 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 TMEM33P57088 247 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 CTXN1P60606 82 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 RAP1BP61224 184 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 RAP1AP62834 184 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 PRKCDQ05655 676 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 TRIP10Q15642 601 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 SGCAQ16586 387 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 PCGF3Q3KNV8 242 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 FAM27BQ5VT28 67 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 TMEM154Q6P9G4 183 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 SLC25A47Q6Q0C1 308 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 HACD2Q6Y1H2 254 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 ZNF730Q6ZMV8 503 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 RINLQ6ZS11 566 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 FKBP9P1Q75LS8 142 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 CBLL1Q75N03 491 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 RRM2BQ7LG56 351 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 CYP4Z1Q86W10 505 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 C1orf174Q8IYL3 243 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 ACOT11Q8WXI4 607 aaPredicted RBP9.5□□□□□ -0.89
CCDC47-206ENST00000584112 NSMAFQ92636 917 aa9.5□□□□□ -0.89
CCDC47-206ENST00000584112 FAM162AQ96A26 154 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms