RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ZNF620Q6ZNG0 422 aa10.9□□□□□ -0.66
SMARCE1-218ENST00000582955 JAZF1Q86VZ6 243 aa10.9□□□□□ -0.66
SMARCE1-218ENST00000582955 SLC30A7Q8NEW0 376 aa10.9□□□□□ -0.66
SMARCE1-218ENST00000582955 OR52L1Q8NGH7 329 aa10.9□□□□□ -0.66
SMARCE1-218ENST00000582955 FOXN4Q96NZ1 517 aa10.9□□□□□ -0.66
SMARCE1-218ENST00000582955 C1orf198Q9H425 327 aa10.9□□□□□ -0.66
SMARCE1-218ENST00000582955 EGLN3Q9H6Z9 239 aa10.9□□□□□ -0.66
SMARCE1-218ENST00000582955 ZNF442Q9H7R0 627 aa10.9□□□□□ -0.66
SMARCE1-218ENST00000582955 CDH20Q9HBT6 801 aa10.9□□□□□ -0.66
SMARCE1-218ENST00000582955 BARX1Q9HBU1 254 aaPredicted RBP10.9□□□□□ -0.66
SMARCE1-218ENST00000582955 PLA2G2EQ9NZK7 142 aa10.9□□□□□ -0.66
SMARCE1-218ENST00000582955 SLC7A8Q9UHI5 535 aa10.9□□□□□ -0.66
SMARCE1-218ENST00000582955 MAP1AP78559 2803 aaPredicted RBP10.9□□□□□ -0.66
SMARCE1-218ENST00000582955 VPS13CQ709C8 3753 aa10.9□□□□□ -0.66
SMARCE1-218ENST00000582955 TRIM64A6NGJ6 449 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 TRIM64BA6NI03 449 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 B9A039 149 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 IMPA2O14732 288 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 GPRIN2O60269 458 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 KHDRBS3O75525 346 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 TXNDC12O95881 172 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 CST2P09228 141 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 MMP7P09237 267 aaPredicted RBP10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 CCL2P13500 99 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 ZNF35P13682 527 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 CTLA4P16410 223 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 HOXB6P17509 224 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 NR4A1P22736 598 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 APLNRP35414 380 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 CDKN2AP42771 156 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 CENPAP49450 140 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 CLEC12BQ2HXU8 276 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 TBC1D28Q2M2D7 210 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 CLEC12AQ5QGZ9 265 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 ZNF770Q6IQ21 691 aaPredicted RBP10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 RPL13AP3Q6NVV1 102 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 LEG1Q6P5S2 330 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 FOXL2NBQ6ZUU3 175 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 PTCHD4Q6ZW05 846 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 OR10G2Q8NGC3 310 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 OR1J2Q8NGS2 313 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 AKR7LQ8NHP1 331 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 LRMDAQ9H2I8 198 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 YY1AP1Q9H869 796 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 EMC7Q9NPA0 242 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 POLE4Q9NR33 117 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 TBC1D23Q9NUY8 699 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 VSX1Q9NZR4 365 aaPredicted RBP10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 CMAHPQ9Y471 501 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 CDH10Q9Y6N8 788 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 MED13LQ71F56 2210 aa10.89□□□□□ -0.67
SMARCE1-218ENST00000582955 TCRBV3S1A0A5B6 114 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 C12orf71A8MTZ7 269 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 H7C1Q1 480 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 H7C417 338 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 ARPC3O15145 178 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 SSX4O60224 188 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 E2F6O75461 281 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 RENP00797 406 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 FAM157BP0CG42 384 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 HIST1H1CP16403 213 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 CCNOP22674 350 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 APEX1P27695 318 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 NUDT6P53370 316 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 PCBD1P61457 104 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 RPS23P62266 143 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 PSG4Q00888 419 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 ENDOGQ14249 297 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 EFNB3Q15768 340 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 SWI5Q1ZZU3 235 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 MST1LQ2TV78 715 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 SLC35F1Q5T1Q4 408 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 DNM1P34Q6PK57 102 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 UGT2A3Q6UWM9 527 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 RASSF6Q6ZTQ3 369 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 GLB1L2Q8IW92 636 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 SVOPLQ8N434 492 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 PAQR4Q8N4S7 273 aaPredicted RBP10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 OR4K13Q8NH42 304 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 TSSK2Q96PF2 358 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 NMNAT3Q96T66 252 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 TEP1Q99973 2627 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 VRK1Q99986 396 aaPredicted RBP10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 BDH2Q9BUT1 245 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 ZNF416Q9BWM5 594 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 NUAK2Q9H093 628 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 OR51B6Q9H340 312 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 PLK3Q9H4B4 646 aa10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 COA3Q9Y2R0 106 aaPredicted RBP10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 ZNF469Q96JG9 3925 aaPredicted RBP10.88□□□□□ -0.67
SMARCE1-218ENST00000582955 SMAD7O15105 426 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 IDH3BO43837 385 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 FKBP6O75344 327 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 SOX14O95416 240 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 SCG5P05408 212 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 GSTM3P21266 225 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 STOMP27105 288 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 CRABP1P29762 137 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 GLRXP35754 106 aa10.87□□□□□ -0.67
SMARCE1-218ENST00000582955 GDI2P50395 445 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms