RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 RAB43Q86YS6 212 aa20.25■□□□□ 0.83
CCDC47-204ENST00000582252 OR4M1Q8NGD0 313 aa20.25■□□□□ 0.83
CCDC47-204ENST00000582252 NTNG2Q96CW9 530 aa20.25■□□□□ 0.83
CCDC47-204ENST00000582252 FOXN4Q96NZ1 517 aa20.25■□□□□ 0.83
CCDC47-204ENST00000582252 OXGR1Q96P68 337 aa20.25■□□□□ 0.83
CCDC47-204ENST00000582252 ABHD6Q9BV23 337 aa20.25■□□□□ 0.83
CCDC47-204ENST00000582252 TMEM185BQ9H7F4 350 aa20.25■□□□□ 0.83
CCDC47-204ENST00000582252 B3GAT2Q9NPZ5 323 aa20.25■□□□□ 0.83
CCDC47-204ENST00000582252 KLHL13Q9P2N7 655 aa20.25■□□□□ 0.83
CCDC47-204ENST00000582252 LINC00854A0A1B0GVQ3 168 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 AIPO00170 330 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 PMS2P2O95744 297 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 IGHG1P01857 330 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 ZNF17P17021 662 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 DLSTP36957 453 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 RFX2P48378 723 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 TMEM176BQ3YBM2 270 aaPredicted RBP20.24■□□□□ 0.83
CCDC47-204ENST00000582252 TMEM225Q6GV28 225 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 OR10H5Q8NGA6 315 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 OR5M1Q8NGP8 315 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 ENKURQ8TC29 256 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 CHAC2Q8WUX2 184 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 MIB2Q96AX9 1013 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 AMELYQ99218 206 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 SMAD5Q99717 465 aaKnown RBP20.24■□□□□ 0.83
CCDC47-204ENST00000582252 ASCL3Q9NQ33 180 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 B3GAT1Q9P2W7 334 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 ING1Q9UK53 422 aaPredicted RBP20.24■□□□□ 0.83
CCDC47-204ENST00000582252 V9GY05 133 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 A0A1W2PNR3 127 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 SULT2B1O00204 365 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 TERTO14746 1132 aaKnown RBP20.24■□□□□ 0.83
CCDC47-204ENST00000582252 PAHP00439 452 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 PSKH1P11801 424 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 SFTPDP35247 375 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 CLRN1P58418 232 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 RPS18P62269 152 aaKnown RBP20.24■□□□□ 0.83
CCDC47-204ENST00000582252 MADCAM1Q13477 382 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 PCK2Q16822 640 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 GLB1L2Q8IW92 636 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 C11orf54Q9H0W9 315 aaPredicted RBP20.24■□□□□ 0.83
CCDC47-204ENST00000582252 NPAP1Q9NZP6 1156 aa20.24■□□□□ 0.83
CCDC47-204ENST00000582252 A0A0G2JMP0 313 aa20.23■□□□□ 0.83
CCDC47-204ENST00000582252 A0A0X1KG70 313 aa20.23■□□□□ 0.83
CCDC47-204ENST00000582252 LOC102725191A0A1B0GVB3 256 aa20.23■□□□□ 0.83
CCDC47-204ENST00000582252 CBR3O75828 277 aa20.23■□□□□ 0.83
CCDC47-204ENST00000582252 P04436 131 aa20.23■□□□□ 0.83
CCDC47-204ENST00000582252 NR2C1P13056 603 aa20.23■□□□□ 0.83
CCDC47-204ENST00000582252 GPR85P60893 370 aa20.23■□□□□ 0.83
CCDC47-204ENST00000582252 WDR38Q5JTN6 314 aa20.23■□□□□ 0.83
CCDC47-204ENST00000582252 UBE2NLQ5JXB2 153 aa20.23■□□□□ 0.83
CCDC47-204ENST00000582252 TIGD3Q6B0B8 471 aa20.23■□□□□ 0.83
CCDC47-204ENST00000582252 DEGS2Q6QHC5 323 aa20.23■□□□□ 0.83
CCDC47-204ENST00000582252 TMPPEQ6ZT21 453 aa20.23■□□□□ 0.83
CCDC47-204ENST00000582252 PRSS35Q8N3Z0 413 aa20.23■□□□□ 0.83
CCDC47-204ENST00000582252 ZNF433Q8N7K0 673 aaPredicted RBP20.23■□□□□ 0.83
CCDC47-204ENST00000582252 NOXO1Q8NFA2 376 aa20.23■□□□□ 0.83
CCDC47-204ENST00000582252 OR4M2Q8NGB6 313 aa20.23■□□□□ 0.83
CCDC47-204ENST00000582252 SLC25A44Q96H78 314 aaPredicted RBP20.23■□□□□ 0.83
CCDC47-204ENST00000582252 WACQ9BTA9 647 aa20.23■□□□□ 0.83
CCDC47-204ENST00000582252 SLC25A18Q9H1K4 315 aa20.23■□□□□ 0.83
CCDC47-204ENST00000582252 EML6Q6ZMW3 1958 aa20.23■□□□□ 0.83
CCDC47-204ENST00000582252 AQP7P3A6NL99 342 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 IFITM5A6NNB3 132 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 SERPINA7P05543 415 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 SNRPBP14678 240 aaKnown RBP20.22■□□□□ 0.83
CCDC47-204ENST00000582252 ZNF43P17038 809 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 MAP2K3P46734 347 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 P2RY4P51582 365 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 FMODQ06828 376 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 RAET1LQ5VY80 246 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 H3F3CQ6NXT2 135 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 IL22RA1Q8N6P7 574 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 IL17RDQ8NFM7 739 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 RFT1Q96AA3 541 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 HDHD2Q9H0R4 259 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 TRBV5-7A0A0A0MS05 114 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 DCDC2BA2VCK2 349 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 TLX3O43711 291 aaPredicted RBP20.22■□□□□ 0.83
CCDC47-204ENST00000582252 SSX4O60224 188 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 EIF1BO60739 113 aaKnown RBP20.22■□□□□ 0.83
CCDC47-204ENST00000582252 UBL3O95164 117 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 KIR3DL2P43630 455 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 SOX2P48431 317 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 NHLRC1Q6VVB1 395 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 STAC2Q6ZMT1 411 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 SYT9Q86SS6 491 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 GPAT4Q86UL3 456 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 AKAP14Q86UN6 197 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 DTX1Q86Y01 620 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 CELF2-AS1Q8N7Q2 184 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 OR6X1Q8NH79 312 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 TSEN15Q8WW01 171 aaKnown RBP20.22■□□□□ 0.83
CCDC47-204ENST00000582252 NKD1Q969G9 470 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 ZC3HAV1LQ96H79 300 aaKnown RBP20.22■□□□□ 0.83
CCDC47-204ENST00000582252 JSRP1Q96MG2 331 aaPredicted RBP20.22■□□□□ 0.83
CCDC47-204ENST00000582252 NAA11Q9BSU3 229 aaPredicted RBP20.22■□□□□ 0.83
CCDC47-204ENST00000582252 MRPL13Q9BYD1 178 aaKnown RBP20.22■□□□□ 0.83
CCDC47-204ENST00000582252 PROK2Q9HC23 129 aa20.22■□□□□ 0.83
CCDC47-204ENST00000582252 LRP12Q9Y561 859 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms