RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 SYNGR4O95473 234 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 WDPCPO95876 746 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 H2BFMP0C1H6 154 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 CTLA4P16410 223 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 ALOX5APP20292 161 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 LAP3P28838 519 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 CD40LGP29965 261 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 CSNK1A1P48729 337 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 CD97P48960 835 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 ZNF84P51523 738 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 DEFA1P59665 94 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 DEFA3P59666 94 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 PPP3R1P63098 170 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 FOXK1P85037 733 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 DBPQ10586 325 aaPredicted RBP8.29□□□□□ -1.08
SS18-220ENST00000582092 CDK5R1Q15078 307 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 HSD17B12Q53GQ0 312 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 YIF1BQ5BJH7 314 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 WIPI1Q5MNZ9 446 aaPredicted RBP8.29□□□□□ -1.08
SS18-220ENST00000582092 IDNKQ5T6J7 187 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 LIPNQ5VXI9 398 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 DMKNQ6E0U4 476 aaPredicted RBP8.29□□□□□ -1.08
SS18-220ENST00000582092 SLC25A25Q6KCM7 469 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 LYPD4Q6UWN0 246 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 RPTNQ6XPR3 784 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 ESPNLQ6ZVH7 1005 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 UBQLNLQ8IYU4 475 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 ZNF679Q8IYX0 411 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 OR8H2Q8N162 312 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 MEIOBQ8N635 442 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 OR6X1Q8NH79 312 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 ZNRF4Q8WWF5 429 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 PSMF1Q92530 271 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 INTS12Q96CB8 462 aaKnown RBP8.29□□□□□ -1.08
SS18-220ENST00000582092 TXNDC15Q96J42 360 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 FOXN4Q96NZ1 517 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 KCNK17Q96T54 332 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 PRRG4Q9BZD6 226 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 TSPAN10Q9H1Z9 355 aaPredicted RBP8.29□□□□□ -1.08
SS18-220ENST00000582092 LDAHQ9H6V9 325 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 ELOVL3Q9HB03 270 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 PROK2Q9HC23 129 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 FANCFQ9NPI8 374 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 AKIP1Q9NQ31 210 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 CENPMQ9NSP4 180 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 ACOXLQ9NUZ1 547 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 PLA2G3Q9NZ20 509 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 COPS3Q9UNS2 423 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 GRIP1Q9Y3R0 1128 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 ATMQ13315 3056 aa8.29□□□□□ -1.08
SS18-220ENST00000582092 BAHCC1Q9P281 2608 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 ZFHX4Q86UP3 3567 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 IGLV1-36A0A0B4J1U3 117 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 OR5H15A6NDH6 313 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 TMEM212A6NML5 194 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 CTDSP2O14595 271 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 SLC19A2O60779 497 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 ZNF254O75437 659 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 CEACAM4O75871 244 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 KRT33AO76009 404 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 AQP8O94778 261 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 GPANK1O95872 356 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 APOA1P02647 267 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 QDPRP09417 244 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 INHBBP09529 407 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 CLEC2LP0C7M8 214 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 BMP4P12644 408 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 RAB3BP20337 219 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 SHC1P29353 583 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 TNFSF8P32971 234 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 TALDO1P37837 337 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 EIF1AXP47813 144 aaKnown RBP8.28□□□□□ -1.08
SS18-220ENST00000582092 INPP1P49441 399 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 PSMD7P51665 324 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 RAC3P60763 192 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 TLE1Q04724 770 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 SLC17A1Q14916 467 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 MEP1BQ16820 701 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 ZNF181Q2M3W8 571 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 TRIM16LQ309B1 348 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 ZMAT1Q5H9K5 638 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 FAM131AQ6UXB0 335 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 SPATC1Q76KD6 591 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 LUZP2Q86TE4 346 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 SULF2Q8IWU5 870 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 TMEM178AQ8NBL3 297 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 NOXO1Q8NFA2 376 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 OR2M7Q8NG81 312 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 OR2V1Q8NHB1 315 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 TSEN15Q8WW01 171 aaKnown RBP8.28□□□□□ -1.08
SS18-220ENST00000582092 TRMT61AQ96FX7 289 aaKnown RBP8.28□□□□□ -1.08
SS18-220ENST00000582092 DIRAS2Q96HU8 199 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 SF3B5Q9BWJ5 86 aaKnown RBP8.28□□□□□ -1.08
SS18-220ENST00000582092 TCF7L1Q9HCS4 588 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 ABCB10Q9NRK6 738 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 KLHL13Q9P2N7 655 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 COMMD3Q9UBI1 195 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 DAPK2Q9UIK4 370 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 ST6GALNAC2Q9UJ37 374 aa8.28□□□□□ -1.08
SS18-220ENST00000582092 KCNG2Q9UJ96 466 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms