RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 ZNF100Q8IYN0 542 aa11.93□□□□□ -0.5
CSNK1D-220ENST00000581737 NANOGP1Q8N7R0 232 aa11.93□□□□□ -0.5
CSNK1D-220ENST00000581737 RELL2Q8NC24 303 aaPredicted RBP11.93□□□□□ -0.5
CSNK1D-220ENST00000581737 OR52N1Q8NH53 320 aa11.93□□□□□ -0.5
CSNK1D-220ENST00000581737 ZFAND2BQ8WV99 257 aa11.93□□□□□ -0.5
CSNK1D-220ENST00000581737 TMEM45BQ96B21 275 aa11.93□□□□□ -0.5
CSNK1D-220ENST00000581737 STARD4Q96DR4 205 aa11.93□□□□□ -0.5
CSNK1D-220ENST00000581737 SPOCK3Q9BQ16 436 aa11.93□□□□□ -0.5
CSNK1D-220ENST00000581737 ENKD1Q9H0I2 346 aa11.93□□□□□ -0.5
CSNK1D-220ENST00000581737 HINT3Q9NQE9 182 aaKnown RBP11.93□□□□□ -0.5
CSNK1D-220ENST00000581737 PLSCR4Q9NRQ2 329 aa11.93□□□□□ -0.5
CSNK1D-220ENST00000581737 HAO2Q9NYQ3 351 aa11.93□□□□□ -0.5
CSNK1D-220ENST00000581737 ING1Q9UK53 422 aaPredicted RBP11.93□□□□□ -0.5
CSNK1D-220ENST00000581737 RCE1Q9Y256 329 aa11.93□□□□□ -0.5
CSNK1D-220ENST00000581737 FLVCR1Q9Y5Y0 555 aa11.93□□□□□ -0.5
CSNK1D-220ENST00000581737 OR6C65A6NJZ3 312 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 BLOC1S5-TXNDC5H3BN57 136 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 XKRYO14609 159 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 MRPL33O75394 65 aaKnown RBP11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 PTHP01270 115 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 AHCYP23526 432 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 PSMA1P25786 263 aaKnown RBP11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 SDHAP31040 664 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 PEX19P40855 299 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 OR3A2P47893 321 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 BLVRAP53004 296 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 TAS2R43P59537 309 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 ZP4Q12836 540 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 SLC35F1Q5T1Q4 408 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 FAM205BPQ63HN1 556 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 LINC00299Q6ZSB3 139 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 USP43Q70EL4 1123 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 CREB3L2Q70SY1 520 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 LSRQ86X29 649 aaPredicted RBP11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 ACBD7Q8N6N7 88 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 HAVCR2Q8TDQ0 301 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 NRGNQ92686 78 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 UFD1Q92890 307 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 APH1AQ96BI3 265 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 SNX18Q96RF0 628 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 C12orf49Q9H741 205 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 NRIP3Q9NQ35 241 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 JKAMPQ9P055 326 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 B3GAT1Q9P2W7 334 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 GRHPRQ9UBQ7 328 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 IL20RAQ9UHF4 553 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 MOKQ9UQ07 419 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 IER3IP1Q9Y5U9 82 aa11.92□□□□□ -0.5
CSNK1D-220ENST00000581737 TRIM64BA6NI03 449 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 A8MXE2 369 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 MCIDASD6RGH6 385 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 RNF13O43567 381 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 CNOT4O95628 575 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 TXNDC12O95881 172 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 CGAP01215 116 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 IGHA1P01876 353 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 UQCRC1P31930 480 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 RGS6P49758 472 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 FXYD6P3P58550 94 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 CTXN1P60606 82 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 ACTA2P62736 377 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 ACTG2P63267 376 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 BDH1Q02338 343 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 POU3F1Q03052 451 aaPredicted RBP11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 HSF2Q03933 536 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 CRMP1Q14194 572 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 TSTQ16762 297 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 TFAP2EQ6VUC0 442 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 THSD4Q6ZMP0 1018 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 MEX3BQ6ZN04 569 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 BEND4Q6ZU67 534 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 AAED1Q7RTV5 226 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 NUFIP2Q7Z417 695 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 LUZP2Q86TE4 346 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 LRRC17Q8N6Y2 441 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 SLC37A3Q8NCC5 494 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 OR52E2Q8NGJ4 325 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 RNASE6Q93091 150 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 CNN2Q99439 309 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 COQ7Q99807 217 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 DCUN1D5Q9BTE7 237 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 KATNB1Q9BVA0 655 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 TMUB1Q9BVT8 246 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 RBM24Q9BX46 236 aaKnown RBP11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 INIPQ9NRY2 104 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 CAB39Q9Y376 341 aaPredicted RBP11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 FREM1Q5H8C1 2179 aa11.91□□□□□ -0.5
CSNK1D-220ENST00000581737 A0A1W2PRG6 482 aa11.9□□□□□ -0.5
CSNK1D-220ENST00000581737 DAPL1A0PJW8 107 aa11.9□□□□□ -0.5
CSNK1D-220ENST00000581737 NKX2-6A6NCS4 301 aa11.9□□□□□ -0.5
CSNK1D-220ENST00000581737 A6NIZ1 184 aa11.9□□□□□ -0.5
CSNK1D-220ENST00000581737 NPIPB13A6NJU9 1138 aa11.9□□□□□ -0.5
CSNK1D-220ENST00000581737 NPIPB4C9JG80 1138 aa11.9□□□□□ -0.5
CSNK1D-220ENST00000581737 C11orf98E9PRG8 122 aa11.9□□□□□ -0.5
CSNK1D-220ENST00000581737 MS4A18H0YCH9 400 aa11.9□□□□□ -0.5
CSNK1D-220ENST00000581737 TRAF3IP2O43734 574 aaPredicted RBP11.9□□□□□ -0.5
CSNK1D-220ENST00000581737 PAX7P23759 505 aa11.9□□□□□ -0.5
CSNK1D-220ENST00000581737 SOX6P35712 828 aa11.9□□□□□ -0.5
CSNK1D-220ENST00000581737 DAP3P51398 398 aaKnown RBP11.9□□□□□ -0.5
CSNK1D-220ENST00000581737 ART1P52961 327 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms