RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 HLA-DQA1P01909 254 aa1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 DTYMKP23919 212 aa1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 EPS15P42566 896 aa1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 CLINT1Q14677 625 aa1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 ZNF77Q15935 545 aa1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 CCDC152Q4G0S7 254 aa1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 ANKRD22Q5VYY1 191 aa1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 LRRC74BQ6ZQY2 392 aa1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 GMCL1P1Q8NEA9 526 aa1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 OR10R2Q8NGX6 335 aa1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 LILRB4Q8NHJ6 448 aa1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 SYAP1Q96A49 352 aaPredicted RBP1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 PIK3IP1Q96FE7 263 aa1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 TMEM43Q9BTV4 400 aa1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 ANKRD19PQ9H560 264 aa1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 CTNNA3Q9UI47 895 aa1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 MRPS7Q9Y2R9 242 aaKnown RBP1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 NID2Q14112 1375 aa1.41□□□□□ -2.18
SMCHD1-206ENST00000581631 BPY2O14599 106 aa1.4□□□□□ -2.19
SMCHD1-206ENST00000581631 MAGEB3O15480 346 aa1.4□□□□□ -2.19
SMCHD1-206ENST00000581631 TIMM8AO60220 97 aaPredicted RBP1.4□□□□□ -2.19
SMCHD1-206ENST00000581631 NOL3O60936 208 aaKnown RBP1.4□□□□□ -2.19
SMCHD1-206ENST00000581631 PPIL2Q13356 520 aa1.4□□□□□ -2.19
SMCHD1-206ENST00000581631 TAF9Q16594 264 aa1.4□□□□□ -2.19
SMCHD1-206ENST00000581631 METTL21CQ5VZV1 264 aa1.4□□□□□ -2.19
SMCHD1-206ENST00000581631 OR2A2Q6IF42 318 aa1.4□□□□□ -2.19
SMCHD1-206ENST00000581631 FBXW12Q6X9E4 464 aa1.4□□□□□ -2.19
SMCHD1-206ENST00000581631 PSTKQ8IV42 348 aaKnown RBP1.4□□□□□ -2.19
SMCHD1-206ENST00000581631 TRPV1Q8NER1 839 aa1.4□□□□□ -2.19
SMCHD1-206ENST00000581631 OR1L4Q8NGR5 311 aa1.4□□□□□ -2.19
SMCHD1-206ENST00000581631 OR13G1Q8NGZ3 307 aa1.4□□□□□ -2.19
SMCHD1-206ENST00000581631 C12orf42Q96LP6 360 aa1.4□□□□□ -2.19
SMCHD1-206ENST00000581631 ZNF488Q96MN9 340 aa1.4□□□□□ -2.19
SMCHD1-206ENST00000581631 NPY6RQ99463 290 aa1.4□□□□□ -2.19
SMCHD1-206ENST00000581631 ERP44Q9BS26 406 aa1.4□□□□□ -2.19
SMCHD1-206ENST00000581631 KCNJ16Q9NPI9 418 aa1.4□□□□□ -2.19
SMCHD1-206ENST00000581631 FAM49BQ9NUQ9 324 aa1.4□□□□□ -2.19
SMCHD1-206ENST00000581631 SH3BGRL2Q9UJC5 107 aa1.4□□□□□ -2.19
SMCHD1-206ENST00000581631 IGKV2-24A0A0C4DH68 120 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 ZNF716A6NP11 495 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 HAS3O00219 553 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 PPP1R2P9O14990 202 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 ZNF208O43345 1280 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 SOX15O60248 233 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 CD74P04233 296 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 ZNF735P0CB33 412 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 SSTR5P35346 364 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 ACTG2P63267 376 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 SRSF5Q13243 272 aaKnown RBP1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 IL15RAQ13261 267 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 KRTAP6-3Q3LI67 103 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 CFAP157Q5JU67 520 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 CCNJQ5T5M9 372 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 AP1ARQ63HQ0 302 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 SLC25A48Q6ZT89 311 aaKnown RBP1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 WDFY1Q8IWB7 410 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 OR9A2Q8NGT5 310 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 OR10J6PQ8NGY7 276 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 OR1P1Q8NH06 330 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 PIFOQ8TCI5 191 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 C17orf50Q8WW18 174 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 STMN2Q93045 179 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 IFT74Q96LB3 600 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 TCEANC2Q96MN5 208 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 TIMM17AQ99595 171 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 ZNF391Q9UJN7 358 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 TMED5Q9Y3A6 229 aa1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 TSSC4Q9Y5U2 329 aaPredicted RBP1.39□□□□□ -2.19
SMCHD1-206ENST00000581631 A0A1W2PPV9 198 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 SNTNA6NMZ2 147 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 C16orf90A8MZG2 172 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 PSTPIP1O43586 416 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 GMFGO60234 142 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 DPM1O60762 260 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 TSPAN12O95859 305 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 HLA-DQB1P01920 261 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 FGGP02679 453 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 P0C880 135 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 RAB3BP20337 219 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 TGFBR1P36897 503 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 ECH1Q13011 328 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 BAMBIQ13145 260 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 PDK3Q15120 406 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 ORMDL2Q53FV1 153 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 THEM4Q5T1C6 240 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 ATAD3BQ5T9A4 648 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 ZSCAN30Q86W11 494 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 OR1L6Q8NGR2 347 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 SLC25A46Q96AG3 418 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 CDX2Q99626 313 aaPredicted RBP1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 TBL1YQ9BQ87 522 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 LHX5Q9H2C1 402 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 OR52D1Q9H346 318 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 SLC38A10Q9HBR0 1119 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 KLHL28Q9NXS3 571 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 DHCR7Q9UBM7 475 aaKnown RBP1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 ZNF230Q9UIE0 474 aaPredicted RBP1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 ST3GAL6Q9Y274 331 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 PEX16Q9Y5Y5 336 aa1.38□□□□□ -2.19
SMCHD1-206ENST00000581631 IGHV1OR15-9A0A0B4J2B8 117 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms