RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 PPP1CBP62140 327 aa16.04■□□□□ 0.16
NDEL1-209ENST00000580738 ZNF362Q5T0B9 420 aaPredicted RBP16.04■□□□□ 0.16
NDEL1-209ENST00000580738 GCNT6Q5T4J0 391 aa16.04■□□□□ 0.16
NDEL1-209ENST00000580738 ASPHD2Q6ICH7 369 aa16.04■□□□□ 0.16
NDEL1-209ENST00000580738 RANBP3LQ86VV4 465 aaPredicted RBP16.04■□□□□ 0.16
NDEL1-209ENST00000580738 MSRB3Q8IXL7 192 aa16.04■□□□□ 0.16
NDEL1-209ENST00000580738 UPRTQ96BW1 309 aa16.04■□□□□ 0.16
NDEL1-209ENST00000580738 SIGLEC11Q96RL6 698 aa16.04■□□□□ 0.16
NDEL1-209ENST00000580738 RBM4BQ9BQ04 359 aaKnown RBP16.04■□□□□ 0.16
NDEL1-209ENST00000580738 SIAEQ9HAT2 523 aa16.04■□□□□ 0.16
NDEL1-209ENST00000580738 CCNB1IP1Q9NPC3 277 aa16.04■□□□□ 0.16
NDEL1-209ENST00000580738 C1RLQ9NZP8 487 aa16.04■□□□□ 0.16
NDEL1-209ENST00000580738 PRORSD1PA6NEY8 169 aa16.03■□□□□ 0.16
NDEL1-209ENST00000580738 TRPC5OSA6NMA1 111 aa16.03■□□□□ 0.16
NDEL1-209ENST00000580738 M0R3H8 397 aa16.03■□□□□ 0.16
NDEL1-209ENST00000580738 KPNA4O00629 521 aaPredicted RBP16.03■□□□□ 0.16
NDEL1-209ENST00000580738 LYPD3O95274 346 aa16.03■□□□□ 0.16
NDEL1-209ENST00000580738 TGDSO95455 350 aa16.03■□□□□ 0.16
NDEL1-209ENST00000580738 SLC2A10O95528 541 aa16.03■□□□□ 0.16
NDEL1-209ENST00000580738 THY1P04216 161 aa16.03■□□□□ 0.16
NDEL1-209ENST00000580738 PPIAL4GP0DN37 164 aa16.03■□□□□ 0.16
NDEL1-209ENST00000580738 PSG4Q00888 419 aa16.03■□□□□ 0.16
NDEL1-209ENST00000580738 CDK5R2Q13319 367 aa16.03■□□□□ 0.16
NDEL1-209ENST00000580738 FIP1L1Q6UN15 594 aaKnown RBP16.03■□□□□ 0.16
NDEL1-209ENST00000580738 BRD3OSQ6XYD6 125 aa16.03■□□□□ 0.16
NDEL1-209ENST00000580738 NOXO1Q8NFA2 376 aa16.03■□□□□ 0.16
NDEL1-209ENST00000580738 NABP1Q96AH0 204 aa16.03■□□□□ 0.16
NDEL1-209ENST00000580738 SEPHS2Q99611 448 aa16.03■□□□□ 0.16
NDEL1-209ENST00000580738 MCHR1Q99705 422 aa16.03■□□□□ 0.16
NDEL1-209ENST00000580738 KCNN2Q9H2S1 579 aa16.03■□□□□ 0.16
NDEL1-209ENST00000580738 MARCH7Q9H992 704 aa16.03■□□□□ 0.16
NDEL1-209ENST00000580738 SLAMF8Q9P0V8 285 aa16.03■□□□□ 0.16
NDEL1-209ENST00000580738 CGGBP1Q9UFW8 167 aaPredicted RBP16.03■□□□□ 0.16
NDEL1-209ENST00000580738 SLC13A4Q9UKG4 626 aa16.03■□□□□ 0.16
NDEL1-209ENST00000580738 UGT2A1Q9Y4X1 527 aa16.03■□□□□ 0.16
NDEL1-209ENST00000580738 CEACAM18A8MTB9 384 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 TIMM23O14925 209 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 CHP2O43745 196 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 TIMM8AO60220 97 aaPredicted RBP16.02■□□□□ 0.16
NDEL1-209ENST00000580738 F13BP05160 661 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 CRYBA1P05813 215 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 WNT2P09544 360 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 ASAH2BP0C7U1 165 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 ERVK-25P63136 954 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 MRPS34P82930 218 aaKnown RBP16.02■□□□□ 0.16
NDEL1-209ENST00000580738 PSG7Q13046 419 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 ZMAT1Q5H9K5 638 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 MTX3Q5HYI7 312 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 ZNF613Q6PF04 617 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 UNQ6126/PRO20091Q6UXV3 157 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 ARMC8Q8IUR7 673 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 POU5F2Q8N7G0 328 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 GOLGA6L1Q8N7Z2 621 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 SMYD1Q8NB12 490 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 OR10S1Q8NGN2 331 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 UBE2FQ969M7 185 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 ZDHHC16Q969W1 377 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 SAMD8Q96LT4 415 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 SLC19A3Q9BZV2 496 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 PRDM13Q9H4Q3 707 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 SLCO1B3Q9NPD5 702 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 IL20RAQ9UHF4 553 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 ZNF229Q9UJW7 825 aa16.02■□□□□ 0.16
NDEL1-209ENST00000580738 IGKV1D-43A0A0B4J1Z2 117 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 CLPSL1A2RUU4 121 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 CPSF4LA6NMK7 179 aaKnown RBP16.01■□□□□ 0.15
NDEL1-209ENST00000580738 SRRM5B3KS81 715 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 BLOC1S5-TXNDC5H3BN57 136 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 TRMUO75648 421 aaKnown RBP16.01■□□□□ 0.15
NDEL1-209ENST00000580738 HIST1H2ABP04908 130 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 UMPSP11172 480 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 MDH2P40926 338 aaKnown RBP16.01■□□□□ 0.15
NDEL1-209ENST00000580738 ZNF133P52736 654 aaPredicted RBP16.01■□□□□ 0.15
NDEL1-209ENST00000580738 SCARB2Q14108 478 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 NPTX1Q15818 432 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 SGCAQ16586 387 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 C10orf128Q5T292 105 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 ZNF774Q6NX45 483 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 TTC33Q6PID6 262 aaPredicted RBP16.01■□□□□ 0.15
NDEL1-209ENST00000580738 BTNL3Q6UXE8 466 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 LRRN1Q6UXK5 716 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 Q6ZR03 302 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 HIST3H2AQ7L7L0 130 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 OR2Z1Q8NG97 314 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 HIST1H2ACQ93077 130 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 DACT3Q96B18 629 aaPredicted RBP16.01■□□□□ 0.15
NDEL1-209ENST00000580738 MAELQ96JY0 434 aaKnown RBP16.01■□□□□ 0.15
NDEL1-209ENST00000580738 OR52B2Q96RD2 323 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 ZNF607Q96SK3 696 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 PAIP2Q9BPZ3 127 aaKnown RBP16.01■□□□□ 0.15
NDEL1-209ENST00000580738 SSBP3Q9BWW4 388 aaPredicted RBP16.01■□□□□ 0.15
NDEL1-209ENST00000580738 CHIAQ9BZP6 476 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 WNT5BQ9H1J7 359 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 NANOGQ9H9S0 305 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 SSU72Q9NP77 194 aaKnown RBP16.01■□□□□ 0.15
NDEL1-209ENST00000580738 PPP1R3CQ9UQK1 317 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 LRCH1Q9Y2L9 728 aa16.01■□□□□ 0.15
NDEL1-209ENST00000580738 IGHV2-70DA0A0C4DH43 119 aa16■□□□□ 0.15
NDEL1-209ENST00000580738 MCIDASD6RGH6 385 aa16■□□□□ 0.15
NDEL1-209ENST00000580738 FMO6PO60774 539 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms