RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 CDH11P55287 796 aa12.54□□□□□ -0.4
SKA2-205ENST00000580541 ISL1P61371 349 aa12.54□□□□□ -0.4
SKA2-205ENST00000580541 FAM27E3Q08E93 113 aa12.54□□□□□ -0.4
SKA2-205ENST00000580541 MAD2L1BPQ15013 274 aaPredicted RBP12.54□□□□□ -0.4
SKA2-205ENST00000580541 ETFDHQ16134 617 aa12.54□□□□□ -0.4
SKA2-205ENST00000580541 GABRA6Q16445 453 aa12.54□□□□□ -0.4
SKA2-205ENST00000580541 FOXL2NBQ6ZUU3 175 aa12.54□□□□□ -0.4
SKA2-205ENST00000580541 USP51Q70EK9 711 aa12.54□□□□□ -0.4
SKA2-205ENST00000580541 SHFQ7M4L6 423 aa12.54□□□□□ -0.4
SKA2-205ENST00000580541 SLC16A14Q7RTX9 510 aa12.54□□□□□ -0.4
SKA2-205ENST00000580541 OR2AJ1Q8NGZ0 328 aa12.54□□□□□ -0.4
SKA2-205ENST00000580541 BCL2L2Q92843 193 aaPredicted RBP12.54□□□□□ -0.4
SKA2-205ENST00000580541 ZNF837Q96EG3 531 aaPredicted RBP12.54□□□□□ -0.4
SKA2-205ENST00000580541 ZNF582Q96NG8 517 aaPredicted RBP12.54□□□□□ -0.4
SKA2-205ENST00000580541 MED20Q9H944 212 aa12.54□□□□□ -0.4
SKA2-205ENST00000580541 CCNB1IP1Q9NPC3 277 aa12.54□□□□□ -0.4
SKA2-205ENST00000580541 POLE4Q9NR33 117 aa12.54□□□□□ -0.4
SKA2-205ENST00000580541 POLR1DQ9Y2S0 133 aa12.54□□□□□ -0.4
SKA2-205ENST00000580541 OR5H1A6NKK0 313 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 FAM171A2A8MVW0 826 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 DCTN6O00399 190 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 DENRO43583 198 aaKnown RBP12.53□□□□□ -0.4
SKA2-205ENST00000580541 UBL3O95164 117 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 CLIC3O95833 236 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 PTHP01270 115 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 GYPBP06028 91 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 CST2P09228 141 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 B4GALT1P15291 398 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 CDAP32320 146 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 CAPZA2P47755 286 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 MED21Q13503 144 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 KLHL22Q53GT1 634 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 TMEM53Q6P2H8 277 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 ALDH16A1Q8IZ83 802 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 SLC26A10Q8NG04 563 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 UBE2FQ969M7 185 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 INTS14Q96SY0 518 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 MNTQ99583 582 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 ACTR6Q9GZN1 396 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 RNF121Q9H920 327 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 SLC17A5Q9NRA2 495 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 SCN3BQ9NY72 215 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 UGT2A1Q9Y4X1 527 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 TIMM10BQ9Y5J6 103 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 TMEM14AQ9Y6G1 99 aa12.53□□□□□ -0.4
SKA2-205ENST00000580541 A0A096LPE4 126 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 ARPC4-TTLL3A0A0A6YYG9 625 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 IGKV1D-43A0A0B4J1Z2 117 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 A0A1W2PPZ6 126 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 PYCARD-AS1I3L0S3 204 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 CASKO14936 926 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 ENTPD6O75354 484 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 GNAO1P09471 354 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 CLUP10909 449 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 GABRB1P18505 474 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 SLC2A5P22732 501 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 MTNR1AP48039 350 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 ENTPD1P49961 510 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 CXCR4P61073 352 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 ADAM8P78325 824 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 PLP2Q04941 152 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 SCRN3Q0VDG4 424 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 CDK5R2Q13319 367 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 AQP6Q13520 282 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 TBRG1Q3YBR2 411 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 TEX30Q5JUR7 227 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 LRRC18Q8N456 261 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 ZNF454Q8N9F8 522 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 GJC3Q8NFK1 279 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 OR51L1Q8NGJ5 315 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 C11orf40Q8WZ69 217 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 CNBD2Q96M20 576 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 HCAR1Q9BXC0 346 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 DNAJC27Q9NZQ0 273 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 LRRC42Q9Y546 428 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 MYO18BQ8IUG5 2567 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 CACNA1CQ13936 2221 aa12.52□□□□□ -0.41
SKA2-205ENST00000580541 TUBAL3A6NHL2 446 aa12.51□□□□□ -0.41
SKA2-205ENST00000580541 M0R129 80 aa12.51□□□□□ -0.41
SKA2-205ENST00000580541 ZNF593O00488 134 aaPredicted RBP12.51□□□□□ -0.41
SKA2-205ENST00000580541 PHYHO14832 338 aa12.51□□□□□ -0.41
SKA2-205ENST00000580541 FADS2O95864 444 aaKnown RBP12.51□□□□□ -0.41
SKA2-205ENST00000580541 CD79AP11912 226 aa12.51□□□□□ -0.41
SKA2-205ENST00000580541 FOXG1P55316 489 aaPredicted RBP12.51□□□□□ -0.41
SKA2-205ENST00000580541 GGTLC2Q14390 218 aa12.51□□□□□ -0.41
SKA2-205ENST00000580541 LINC01590Q5TEZ4 76 aa12.51□□□□□ -0.41
SKA2-205ENST00000580541 SLC16A9Q7RTY1 509 aa12.51□□□□□ -0.41
SKA2-205ENST00000580541 ERI1Q8IV48 349 aaKnown RBP12.51□□□□□ -0.41
SKA2-205ENST00000580541 SKA3Q8IX90 412 aa12.51□□□□□ -0.41
SKA2-205ENST00000580541 FAM169BQ8N8A8 192 aa12.51□□□□□ -0.41
SKA2-205ENST00000580541 ZNF511Q8NB15 262 aa12.51□□□□□ -0.41
SKA2-205ENST00000580541 BBS1Q8NFJ9 593 aa12.51□□□□□ -0.41
SKA2-205ENST00000580541 S100PBPQ96BU1 408 aa12.51□□□□□ -0.41
SKA2-205ENST00000580541 ZMYND19Q96E35 227 aaPredicted RBP12.51□□□□□ -0.41
SKA2-205ENST00000580541 MRPL48Q96GC5 212 aaKnown RBP12.51□□□□□ -0.41
SKA2-205ENST00000580541 CNN2Q99439 309 aaKnown RBP12.51□□□□□ -0.41
SKA2-205ENST00000580541 MED18Q9BUE0 208 aa12.51□□□□□ -0.41
SKA2-205ENST00000580541 YIPF3Q9GZM5 350 aa12.51□□□□□ -0.41
SKA2-205ENST00000580541 MARCH7Q9H992 704 aa12.51□□□□□ -0.41
SKA2-205ENST00000580541 IQCMA0A1B0GVH7 501 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms